Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is argR

Identifier: 119357135

GI number: 119357135

Start: 1516808

End: 1517257

Strand: Direct

Name: argR

Synonym: Cpha266_1324

Alternate gene names: 119357135

Gene position: 1516808-1517257 (Clockwise)

Preceding gene: 119357134

Following gene: 119357136

Centisome position: 48.4

GC content: 52.0

Gene sequence:

>450_bases
ATGAACAAGCAGTTACGGCAGTTGAAGGTCAGGGAGATCCTGTGCCAGCATGATGTTGGCAATCAGCACGACCTGATGCG
GCTTCTCAACAGTGCCGGCATCAGGGTTGCCCAGGCCACCCTGTCACGCGACTGCAATGAAATCGGGGTTGTCCGCTCGC
GGGACTCAAAAGGCTACCGGCTTGTCTATTCCGAAAAAAATCCGGGATGGATCATCAAAGGCCTTGTCGGCGTTGAAGTG
CTGTCCGTGAAGGCCAACGAAACATCCATCATCATCAGAACCCTTCCAGGCAGGGCGCACGGCGTAGGATCCTTTCTTGA
CGAACTCAAAAGCCCGATGATTCTTGGCACCATTGCCGGCGACGACACGGTTCTGGTCATTCCCGGTTCGATAAAGCAGA
TTTCAGAGCTTGTAAGCTATATTAAGGATAATCTTTCACAAAACGCATAA

Upstream 100 bases:

>100_bases
GGTAAAACTGTTGAGCCATGATGTGTACAGAAAATTCCATCTGACTCACCGCCTGATGAATGCGGCGAAAAACATCAAGG
TATAAGGAGCATTGAACAAC

Downstream 100 bases:

>100_bases
TCATAAACCCGTATGAGCAAGGAAAAAATCGCCATAGCCTATTCCGGCGGACTTGATACCTCTATCATGATCAAATGGCT
TAAAGACAAATACGATGCCG

Product: ArgR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNKQLRQLKVREILCQHDVGNQHDLMRLLNSAGIRVAQATLSRDCNEIGVVRSRDSKGYRLVYSEKNPGWIIKGLVGVEV
LSVKANETSIIIRTLPGRAHGVGSFLDELKSPMILGTIAGDDTVLVIPGSIKQISELVSYIKDNLSQNA

Sequences:

>Translated_149_residues
MNKQLRQLKVREILCQHDVGNQHDLMRLLNSAGIRVAQATLSRDCNEIGVVRSRDSKGYRLVYSEKNPGWIIKGLVGVEV
LSVKANETSIIIRTLPGRAHGVGSFLDELKSPMILGTIAGDDTVLVIPGSIKQISELVSYIKDNLSQNA
>Mature_149_residues
MNKQLRQLKVREILCQHDVGNQHDLMRLLNSAGIRVAQATLSRDCNEIGVVRSRDSKGYRLVYSEKNPGWIIKGLVGVEV
LSVKANETSIIIRTLPGRAHGVGSFLDELKSPMILGTIAGDDTVLVIPGSIKQISELVSYIKDNLSQNA

Specific function: Regulates arginine biosynthesis genes

COG id: COG1438

COG function: function code K; Arginine repressor

Gene ontology:

Cell location: Cytoplasm (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArgR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARGR_CHLPD (A1BG28)

Other databases:

- EMBL:   CP000492
- RefSeq:   YP_911779.1
- ProteinModelPortal:   A1BG28
- SMR:   A1BG28
- STRING:   A1BG28
- GeneID:   4570902
- GenomeReviews:   CP000492_GR
- KEGG:   cph:Cpha266_1324
- NMPDR:   fig|290317.7.peg.1396
- eggNOG:   COG1438
- HOGENOM:   HBG697909
- OMA:   TENEIHT
- ProtClustDB:   CLSK637602
- GO:   GO:0005737
- HAMAP:   MF_00173
- InterPro:   IPR001669
- InterPro:   IPR020899
- InterPro:   IPR020900
- InterPro:   IPR011991
- Gene3D:   G3DSA:3.30.1360.40
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR01467
- ProDom:   PD007402

Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C; SSF55252 Arg_repress

EC number: NA

Molecular weight: Translated: 16363; Mature: 16363

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQLRQLKVREILCQHDVGNQHDLMRLLNSAGIRVAQATLSRDCNEIGVVRSRDSKGYR
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEHHHHHHCCHHHHCCEECCCCCCEE
LVYSEKNPGWIIKGLVGVEVLSVKANETSIIIRTLPGRAHGVGSFLDELKSPMILGTIAG
EEEECCCCCEEEEEEECEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEECC
DDTVLVIPGSIKQISELVSYIKDNLSQNA
CCEEEEECCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKQLRQLKVREILCQHDVGNQHDLMRLLNSAGIRVAQATLSRDCNEIGVVRSRDSKGYR
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEHHHHHHCCHHHHCCEECCCCCCEE
LVYSEKNPGWIIKGLVGVEVLSVKANETSIIIRTLPGRAHGVGSFLDELKSPMILGTIAG
EEEECCCCCEEEEEEECEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEECC
DDTVLVIPGSIKQISELVSYIKDNLSQNA
CCEEEEECCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA