Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is kojP [H]
Identifier: 119357010
GI number: 119357010
Start: 1350932
End: 1353295
Strand: Direct
Name: kojP [H]
Synonym: Cpha266_1194
Alternate gene names: 119357010
Gene position: 1350932-1353295 (Clockwise)
Preceding gene: 119357008
Following gene: 119357011
Centisome position: 43.11
GC content: 44.08
Gene sequence:
>2364_bases ATGTCCCGACGTTCCGCTTCTGACCTTGCTTCCGCTTGCTTTTCGGCTGAAAAATTACTTGAACTCTCTGCTGAAGAGTG GCTTCTGAGACGAAAGGTTTTCAGAAATTCCGAAAAAAGCATTCAGGCAAACGAGTCGATTTTCACCATTGGAAACGGTT ATCTCAATGTCAGGGGAAGTCTTGAAGAGCTCCCTCCGGGTCATTGCGGCGGGATGTATATCAGCGGGATTTACGATAAA TCAGAAGCAGATGTTGAAGAATTGGTGAAATGTCCCATGTGGACGGATGTGTCAGTCTGGAGCGAAGGAGAGAAATTCTG TTTGTCTTGCTGCAAGATACTCTTTCATGAGCAGGTGCTCGATATGAAAAAAGGGGTGCTTCATCGTCTGTCGACCCTGA AAAACGCGGCAGGAAAAATCATCACCATTCAGACAGCCCGACTTGTTTTCATGCACAATGTGCACCTGGGTTATCTGTTT GTAAAAGTGACCCCCAGAAACTTTTCGGCACCGTTGAGAGTCTTGAGCGGTCTTAATGGTGATGTCTGCAACAGGGGTTA TTTTCCGAGAGAGATGCTCAAGCATCTTCAGCTTGAAAAAATTGAGCGCGGAAGAGCTTTCATGTATCTCGAAATGAAAA CACGTGATCGCGGTATAAGAATATCCGAAGCGGCATCATGGAAGCTGATTTCGCATGACGCCTCCGTGCAGCGGTGGGAG CCCCGGATATACGGAGAGAAATTTACCAGTGAAATTACTATTGATGCTCAAAAAGGCGAATCCTATATTTTTGAAAAGCT TTGCGTGGTGTTGACAAGCAGGGAAGTCCCCGATGCACAATTATACAAAGAGACTATCTGTCAATTGAAAGCCTATGTCC GAAGCACCGCTCTTAACGAAATTGCAGCAAACTTTACTGTCTGGCAAGAAAAATGGAAGCAATCCGATGTCGTCATTGTC GGCGATGAGGAGGCGCAGAAAGCGTTGCGCTTCAATATTTATCACCTGCTTATCAACGGGCCGCCGAGAGTTGGAAGCAT AGGGGCAAAGTTTCTGAGTTCAGAAGGATATCTCGGACATGTTTTCTGGGATACCGAAATTTTTATTCTGCCTTTTTATA TCTACAACTTTCCGGAGATCGCCCGGAACATGCTCTTATACCGTTACCATACACTTCCGGGAGCGGTAAAAAACGCCGTG AATGCCGGTTGTACAGGAGCGAAATACGCATGGGAATCGGCAACAACCGGAGAGGATGTCACTCCTCGATTTGCATCAAA ACTTGAAAAAACCATCCGGTTTATCTATACCGGTACAGAAGAGGACCATATTGTTTCTGACGTGATCTATGGTCTTGAAA AGTATTTTCGTGTTACGGGTGACGAGAGTTTTCTTCTTGAATACGGACTTGAAATGCTTTTTATGACCGCCAGATTTTGG GCAAGCCGGGTTGTCAAGGTAGATGATTCCTATGAGATTCATTGCGTCATAGGACCGGATGAGTTTCATGAGCATGTCAA TAACAATGCCTACACAAATTTTATGGTGAAATGGCATTTGGAACTTGCCGCGACTCTCTACGGCTATATGCATAAAAAAA ACCCGGTTTCACTTGACTATCTCTGCCGGAAAATTTGTTTCAACAAATCCGAAGCTGATAACTGGCTTGTTATCAGCAGG AATATGAAATTTTCTGTTGATCCGCAAACCCGTCTTTTCGAGCAGTTCGATGGTTACTTCAACCTCAGAGATTATGTTTT CAGTGGTTATGATCGAACAGGCCATCCGACTTTGCCCCGAGGTGTCAATTACAGAACGATCGGGTCGACAACTCTGATCA AGCAGGCTGATGTGGTCATCATGATGTTGCTGTTCCCTCACAACTTTAGTGATGAGGAAAAGAGGGTAAATTACGAGTAT TATGAGCAGCGAACAGCTCATAAGTCATCGTTAAGTCACTGTACTTACGCCATGATGGGACTTGCAATCGGAAAGCGGAC AAGGGCATATAGTTATTTTATGAAAACGGCACTGTTTGATCTTGACAATCTTCATAAAAATACTCATTTGGGGATTCATG CTGCAGCCGTGGGTGGAACATGGCAGACCGTTGTCAACGGGTTCGGGGGATTGTCGATTAAATCAGACCGTATTGTCATG AACCCTTGGCTTCCAAAGAAATGGGAGAGTCTTTCATTTACCGTTCGATGGAAAGCGAGGTTCGTTGATATCAATATTTT TCATGACAGAATATCGATATTGATCCGTTCAGAAGATGCTGTTGAAATTCCTTTGAGTCTTTACAGAAAAACATATAAAA TAAAATCTAACGAAGTTCAGGTTCTTCACTACTGTTCATCCTGA
Upstream 100 bases:
>100_bases AAGAACTATTAGTGTCGGATAATTGTAATGTTACGTGTTAAAATAGTTCTGCCTGTTGACTTTTTTTGTCTCACCGCTGT TTATATCCAGGGAGAATTTC
Downstream 100 bases:
>100_bases CACGAAGGCGGAGGGACGGTTGCGATGAGATTGATCGTTGTAGGCTGTTCAGGCCGCTCAAGGTATTATCTGGCGGATCG CTTGAAAAGTTGTACTATGT
Product: Kojibiose phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 787; Mature: 786
Protein sequence:
>787_residues MSRRSASDLASACFSAEKLLELSAEEWLLRRKVFRNSEKSIQANESIFTIGNGYLNVRGSLEELPPGHCGGMYISGIYDK SEADVEELVKCPMWTDVSVWSEGEKFCLSCCKILFHEQVLDMKKGVLHRLSTLKNAAGKIITIQTARLVFMHNVHLGYLF VKVTPRNFSAPLRVLSGLNGDVCNRGYFPREMLKHLQLEKIERGRAFMYLEMKTRDRGIRISEAASWKLISHDASVQRWE PRIYGEKFTSEITIDAQKGESYIFEKLCVVLTSREVPDAQLYKETICQLKAYVRSTALNEIAANFTVWQEKWKQSDVVIV GDEEAQKALRFNIYHLLINGPPRVGSIGAKFLSSEGYLGHVFWDTEIFILPFYIYNFPEIARNMLLYRYHTLPGAVKNAV NAGCTGAKYAWESATTGEDVTPRFASKLEKTIRFIYTGTEEDHIVSDVIYGLEKYFRVTGDESFLLEYGLEMLFMTARFW ASRVVKVDDSYEIHCVIGPDEFHEHVNNNAYTNFMVKWHLELAATLYGYMHKKNPVSLDYLCRKICFNKSEADNWLVISR NMKFSVDPQTRLFEQFDGYFNLRDYVFSGYDRTGHPTLPRGVNYRTIGSTTLIKQADVVIMMLLFPHNFSDEEKRVNYEY YEQRTAHKSSLSHCTYAMMGLAIGKRTRAYSYFMKTALFDLDNLHKNTHLGIHAAAVGGTWQTVVNGFGGLSIKSDRIVM NPWLPKKWESLSFTVRWKARFVDINIFHDRISILIRSEDAVEIPLSLYRKTYKIKSNEVQVLHYCSS
Sequences:
>Translated_787_residues MSRRSASDLASACFSAEKLLELSAEEWLLRRKVFRNSEKSIQANESIFTIGNGYLNVRGSLEELPPGHCGGMYISGIYDK SEADVEELVKCPMWTDVSVWSEGEKFCLSCCKILFHEQVLDMKKGVLHRLSTLKNAAGKIITIQTARLVFMHNVHLGYLF VKVTPRNFSAPLRVLSGLNGDVCNRGYFPREMLKHLQLEKIERGRAFMYLEMKTRDRGIRISEAASWKLISHDASVQRWE PRIYGEKFTSEITIDAQKGESYIFEKLCVVLTSREVPDAQLYKETICQLKAYVRSTALNEIAANFTVWQEKWKQSDVVIV GDEEAQKALRFNIYHLLINGPPRVGSIGAKFLSSEGYLGHVFWDTEIFILPFYIYNFPEIARNMLLYRYHTLPGAVKNAV NAGCTGAKYAWESATTGEDVTPRFASKLEKTIRFIYTGTEEDHIVSDVIYGLEKYFRVTGDESFLLEYGLEMLFMTARFW ASRVVKVDDSYEIHCVIGPDEFHEHVNNNAYTNFMVKWHLELAATLYGYMHKKNPVSLDYLCRKICFNKSEADNWLVISR NMKFSVDPQTRLFEQFDGYFNLRDYVFSGYDRTGHPTLPRGVNYRTIGSTTLIKQADVVIMMLLFPHNFSDEEKRVNYEY YEQRTAHKSSLSHCTYAMMGLAIGKRTRAYSYFMKTALFDLDNLHKNTHLGIHAAAVGGTWQTVVNGFGGLSIKSDRIVM NPWLPKKWESLSFTVRWKARFVDINIFHDRISILIRSEDAVEIPLSLYRKTYKIKSNEVQVLHYCSS >Mature_786_residues SRRSASDLASACFSAEKLLELSAEEWLLRRKVFRNSEKSIQANESIFTIGNGYLNVRGSLEELPPGHCGGMYISGIYDKS EADVEELVKCPMWTDVSVWSEGEKFCLSCCKILFHEQVLDMKKGVLHRLSTLKNAAGKIITIQTARLVFMHNVHLGYLFV KVTPRNFSAPLRVLSGLNGDVCNRGYFPREMLKHLQLEKIERGRAFMYLEMKTRDRGIRISEAASWKLISHDASVQRWEP RIYGEKFTSEITIDAQKGESYIFEKLCVVLTSREVPDAQLYKETICQLKAYVRSTALNEIAANFTVWQEKWKQSDVVIVG DEEAQKALRFNIYHLLINGPPRVGSIGAKFLSSEGYLGHVFWDTEIFILPFYIYNFPEIARNMLLYRYHTLPGAVKNAVN AGCTGAKYAWESATTGEDVTPRFASKLEKTIRFIYTGTEEDHIVSDVIYGLEKYFRVTGDESFLLEYGLEMLFMTARFWA SRVVKVDDSYEIHCVIGPDEFHEHVNNNAYTNFMVKWHLELAATLYGYMHKKNPVSLDYLCRKICFNKSEADNWLVISRN MKFSVDPQTRLFEQFDGYFNLRDYVFSGYDRTGHPTLPRGVNYRTIGSTTLIKQADVVIMMLLFPHNFSDEEKRVNYEYY EQRTAHKSSLSHCTYAMMGLAIGKRTRAYSYFMKTALFDLDNLHKNTHLGIHAAAVGGTWQTVVNGFGGLSIKSDRIVMN PWLPKKWESLSFTVRWKARFVDINIFHDRISILIRSEDAVEIPLSLYRKTYKIKSNEVQVLHYCSS
Specific function: Hydrolyzes kojibiose in the presence of an inorganic phosphoric acid to form D-glucose and beta-D-glucose-1-phosphoric acid. Can act with alpha-1,2-oligoglucans, such as selaginose, as substrate, but more slowly. Inactive when dissaccharides with linkages
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=440, Percent_Identity=27.7272727272727, Blast_Score=152, Evalue=9e-37, Organism=Escherichia coli, GI1787575, Length=731, Percent_Identity=30.3693570451436, Blast_Score=347, Evalue=2e-96, Organism=Saccharomyces cerevisiae, GI6325283, Length=397, Percent_Identity=24.4332493702771, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24583760, Length=379, Percent_Identity=26.6490765171504, Blast_Score=100, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: =2.4.1.230 [H]
Molecular weight: Translated: 90613; Mature: 90482
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRSASDLASACFSAEKLLELSAEEWLLRRKVFRNSEKSIQANESIFTIGNGYLNVRGS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCCEEEECCC LEELPPGHCGGMYISGIYDKSEADVEELVKCPMWTDVSVWSEGEKFCLSCCKILFHEQVL HHHCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHH DMKKGVLHRLSTLKNAAGKIITIQTARLVFMHNVHLGYLFVKVTPRNFSAPLRVLSGLNG HHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECEEEEEEEEECCCCCCCHHHHHCCCCC DVCNRGYFPREMLKHLQLEKIERGRAFMYLEMKTRDRGIRISEAASWKLISHDASVQRWE CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCEEEEECCCCCHHCC PRIYGEKFTSEITIDAQKGESYIFEKLCVVLTSREVPDAQLYKETICQLKAYVRSTALNE CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH IAANFTVWQEKWKQSDVVIVGDEEAQKALRFNIYHLLINGPPRVGSIGAKFLSSEGYLGH HHHHHHHHHHHHCCCCEEEECCHHHHHHHHEEEEEEEECCCCCCCHHHHHHHCCCCCEEE VFWDTEIFILPFYIYNFPEIARNMLLYRYHTLPGAVKNAVNAGCTGAKYAWESATTGEDV EEECCEEEEEEHHHCCCHHHHHHHHHHHEECCCHHHHHHHCCCCCCCCEECCCCCCCCCC TPRFASKLEKTIRFIYTGTEEDHIVSDVIYGLEKYFRVTGDESFLLEYGLEMLFMTARFW CHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH ASRVVKVDDSYEIHCVIGPDEFHEHVNNNAYTNFMVKWHLELAATLYGYMHKKNPVSLDY HHEEEEECCCEEEEEEECCHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCHHH LCRKICFNKSEADNWLVISRNMKFSVDPQTRLFEQFDGYFNLRDYVFSGYDRTGHPTLPR HHHHHHCCCCCCCCEEEEECCCEEECCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC GVNYRTIGSTTLIKQADVVIMMLLFPHNFSDEEKRVNYEYYEQRTAHKSSLSHCTYAMMG CCCEEECCCCHHHHHHHHEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LAIGKRTRAYSYFMKTALFDLDNLHKNTHLGIHAAAVGGTWQTVVNGFGGLSIKSDRIVM HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCCCCCEEECCEEEE NPWLPKKWESLSFTVRWKARFVDINIFHDRISILIRSEDAVEIPLSLYRKTYKIKSNEVQ CCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEEEEECCCCEECCHHHHHHHHEECCCCEE VLHYCSS EEEEECC >Mature Secondary Structure SRRSASDLASACFSAEKLLELSAEEWLLRRKVFRNSEKSIQANESIFTIGNGYLNVRGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCCEEEECCC LEELPPGHCGGMYISGIYDKSEADVEELVKCPMWTDVSVWSEGEKFCLSCCKILFHEQVL HHHCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHH DMKKGVLHRLSTLKNAAGKIITIQTARLVFMHNVHLGYLFVKVTPRNFSAPLRVLSGLNG HHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECEEEEEEEEECCCCCCCHHHHHCCCCC DVCNRGYFPREMLKHLQLEKIERGRAFMYLEMKTRDRGIRISEAASWKLISHDASVQRWE CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCEEEEECCCCCHHCC PRIYGEKFTSEITIDAQKGESYIFEKLCVVLTSREVPDAQLYKETICQLKAYVRSTALNE CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH IAANFTVWQEKWKQSDVVIVGDEEAQKALRFNIYHLLINGPPRVGSIGAKFLSSEGYLGH HHHHHHHHHHHHCCCCEEEECCHHHHHHHHEEEEEEEECCCCCCCHHHHHHHCCCCCEEE VFWDTEIFILPFYIYNFPEIARNMLLYRYHTLPGAVKNAVNAGCTGAKYAWESATTGEDV EEECCEEEEEEHHHCCCHHHHHHHHHHHEECCCHHHHHHHCCCCCCCCEECCCCCCCCCC TPRFASKLEKTIRFIYTGTEEDHIVSDVIYGLEKYFRVTGDESFLLEYGLEMLFMTARFW CHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH ASRVVKVDDSYEIHCVIGPDEFHEHVNNNAYTNFMVKWHLELAATLYGYMHKKNPVSLDY HHEEEEECCCEEEEEEECCHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCHHH LCRKICFNKSEADNWLVISRNMKFSVDPQTRLFEQFDGYFNLRDYVFSGYDRTGHPTLPR HHHHHHCCCCCCCCEEEEECCCEEECCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC GVNYRTIGSTTLIKQADVVIMMLLFPHNFSDEEKRVNYEYYEQRTAHKSSLSHCTYAMMG CCCEEECCCCHHHHHHHHEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LAIGKRTRAYSYFMKTALFDLDNLHKNTHLGIHAAAVGGTWQTVVNGFGGLSIKSDRIVM HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCCCCCEEECCEEEE NPWLPKKWESLSFTVRWKARFVDINIFHDRISILIRSEDAVEIPLSLYRKTYKIKSNEVQ CCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEEEEECCCCEECCHHHHHHHHEECCCCEE VLHYCSS EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA