Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
---|---|
Accession | NC_008639 |
Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is pstC [H]
Identifier: 119356866
GI number: 119356866
Start: 1175974
End: 1177137
Strand: Direct
Name: pstC [H]
Synonym: Cpha266_1039
Alternate gene names: 119356866
Gene position: 1175974-1177137 (Clockwise)
Preceding gene: 119356865
Following gene: 119356867
Centisome position: 37.52
GC content: 49.83
Gene sequence:
>1164_bases ATGGGTGATCAGGCAATAAAGAGCAGCAATCGTTCAGGTGCGTTTGTTGTGAGCGAAAAAAAACGCAGGGTGCAGAGAAT TACCAAAATCGCAGGAGAGATGCTTCTTCTCGGTATTGCTTCGTTTGTAGCTATTGTTGTACTCTTCATTTTTTACTTTG TTGCCGTTGATGCCATTCCGTTCTTTCAACTTCAGGGTTTCAGTGAGTTTTTTGCCAGTTCAGCCTGGTATCCTGCCGAT GATCCCCCTCAGTTTGGAGCACTTGCCATCATATACGGCAGCGGAATGGTTACGCTCGGTTCAGCCCTGCTTGCTGTTCC CATGGGTATAGCTGCAGCTATCTGTCTCAGCGATATTCTTCCCTTTACCATTCGACAGTATGCAAAACCGGTTATTGAAA TGCTTGCGGCCATTCCTTCCGTCGCATTCGGTTTTTTTGCTCTGGTGATTTTCGCCCCTCTCCTGCAGTCAAACGGAGGT TCGCTTCTGATGTGGACCTGGTGGCTCCTTGCCGCTCCTTGTCTCCTGCTTCTGGTTATTGTTGTTACCGATCTGTTGAC TACAAAGATCGAGGATCAGCAAAAACGCAAATGGTTTACAATAGTGCTGACGATTCTTTTTGCTTCAGCGTCGCTGGCTC TTCTCTATCTGGTCGGGACTTTTCTGCAGGGAATCGAAATCCTTACCGGCACCAATGCGCTCAACGTTTCCATTATGCTC AGTTTCATGGCGCTTCCGACCATAGTGAGCGTTTCCGAAGATGCCTTGCAGGCGGTAGGGCGCGAGCTGCGGGAAGGCAG TTACGCTCTTGGAGCAACACGCGCCGAAACCATCATCAAGACTGTTCTTCCCGCAGCAAGCAGCGGGATTCTTGCCGCAG TGATTCTCGGTGTTATGCGCTCCCTCGGTGAAACCATGGTGGTATGGATGGCATCGGGGAACTCTTCGAGCATTCCTGAG CCCTGGTTCAATTATCTCTCTGCGGTTCGAACCCTTACGGCAACTATTGCAGGCGATATGGGAGAGGCCGACCAGGTTAC CGGATCGGCTCGTTTCCATGTGTTGTTTGCCATGGGTCTTCTTCTTCTTGTCATCAGTTTTATCAGCAACCTTGTCAGTG AGAGAATCGTTGTCCGTCAGCGCAAAATTCTTTCCGGGCAATAA
Upstream 100 bases:
>100_bases GGTGCTTTTTTTCTTCACCCAAACCGAATAGATTAGGGGCATTCAAAGTGAAGGAGCTCTTAAGCGGTTCCAGGTAATGA GGAAATAAATTGCAAAGGCT
Downstream 100 bases:
>100_bases TTTGCTTCCATCTGACAATATGATCAACTGTCACTCAAACCGTCTCTTATGAATCTCGGTACCAGAAAAATCCTTGACCG TTCGTTTACCTCTATAGGTT
Product: phosphate ABC transporter, inner membrane subunit PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MGDQAIKSSNRSGAFVVSEKKRRVQRITKIAGEMLLLGIASFVAIVVLFIFYFVAVDAIPFFQLQGFSEFFASSAWYPAD DPPQFGALAIIYGSGMVTLGSALLAVPMGIAAAICLSDILPFTIRQYAKPVIEMLAAIPSVAFGFFALVIFAPLLQSNGG SLLMWTWWLLAAPCLLLLVIVVTDLLTTKIEDQQKRKWFTIVLTILFASASLALLYLVGTFLQGIEILTGTNALNVSIML SFMALPTIVSVSEDALQAVGRELREGSYALGATRAETIIKTVLPAASSGILAAVILGVMRSLGETMVVWMASGNSSSIPE PWFNYLSAVRTLTATIAGDMGEADQVTGSARFHVLFAMGLLLLVISFISNLVSERIVVRQRKILSGQ
Sequences:
>Translated_387_residues MGDQAIKSSNRSGAFVVSEKKRRVQRITKIAGEMLLLGIASFVAIVVLFIFYFVAVDAIPFFQLQGFSEFFASSAWYPAD DPPQFGALAIIYGSGMVTLGSALLAVPMGIAAAICLSDILPFTIRQYAKPVIEMLAAIPSVAFGFFALVIFAPLLQSNGG SLLMWTWWLLAAPCLLLLVIVVTDLLTTKIEDQQKRKWFTIVLTILFASASLALLYLVGTFLQGIEILTGTNALNVSIML SFMALPTIVSVSEDALQAVGRELREGSYALGATRAETIIKTVLPAASSGILAAVILGVMRSLGETMVVWMASGNSSSIPE PWFNYLSAVRTLTATIAGDMGEADQVTGSARFHVLFAMGLLLLVISFISNLVSERIVVRQRKILSGQ >Mature_386_residues GDQAIKSSNRSGAFVVSEKKRRVQRITKIAGEMLLLGIASFVAIVVLFIFYFVAVDAIPFFQLQGFSEFFASSAWYPADD PPQFGALAIIYGSGMVTLGSALLAVPMGIAAAICLSDILPFTIRQYAKPVIEMLAAIPSVAFGFFALVIFAPLLQSNGGS LLMWTWWLLAAPCLLLLVIVVTDLLTTKIEDQQKRKWFTIVLTILFASASLALLYLVGTFLQGIEILTGTNALNVSIMLS FMALPTIVSVSEDALQAVGRELREGSYALGATRAETIIKTVLPAASSGILAAVILGVMRSLGETMVVWMASGNSSSIPEP WFNYLSAVRTLTATIAGDMGEADQVTGSARFHVLFAMGLLLLVISFISNLVSERIVVRQRKILSGQ
Specific function: Part of a binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=315, Percent_Identity=25.7142857142857, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 41634; Mature: 41503
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDQAIKSSNRSGAFVVSEKKRRVQRITKIAGEMLLLGIASFVAIVVLFIFYFVAVDAIP CCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFQLQGFSEFFASSAWYPADDPPQFGALAIIYGSGMVTLGSALLAVPMGIAAAICLSDIL HHHHCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH PFTIRQYAKPVIEMLAAIPSVAFGFFALVIFAPLLQSNGGSLLMWTWWLLAAPCLLLLVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VVTDLLTTKIEDQQKRKWFTIVLTILFASASLALLYLVGTFLQGIEILTGTNALNVSIML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH SFMALPTIVSVSEDALQAVGRELREGSYALGATRAETIIKTVLPAASSGILAAVILGVMR HHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SLGETMVVWMASGNSSSIPEPWFNYLSAVRTLTATIAGDMGEADQVTGSARFHVLFAMGL HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHH LLLVISFISNLVSERIVVRQRKILSGQ HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GDQAIKSSNRSGAFVVSEKKRRVQRITKIAGEMLLLGIASFVAIVVLFIFYFVAVDAIP CCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFQLQGFSEFFASSAWYPADDPPQFGALAIIYGSGMVTLGSALLAVPMGIAAAICLSDIL HHHHCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH PFTIRQYAKPVIEMLAAIPSVAFGFFALVIFAPLLQSNGGSLLMWTWWLLAAPCLLLLVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VVTDLLTTKIEDQQKRKWFTIVLTILFASASLALLYLVGTFLQGIEILTGTNALNVSIML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH SFMALPTIVSVSEDALQAVGRELREGSYALGATRAETIIKTVLPAASSGILAAVILGVMR HHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SLGETMVVWMASGNSSSIPEPWFNYLSAVRTLTATIAGDMGEADQVTGSARFHVLFAMGL HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHH LLLVISFISNLVSERIVVRQRKILSGQ HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]