Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is nuoL [H]
Identifier: 119356797
GI number: 119356797
Start: 1108387
End: 1110666
Strand: Direct
Name: nuoL [H]
Synonym: Cpha266_0969
Alternate gene names: 119356797
Gene position: 1108387-1110666 (Clockwise)
Preceding gene: 119356796
Following gene: 119356798
Centisome position: 35.37
GC content: 47.63
Gene sequence:
>2280_bases ATGCACAGTTTAATTCAGTTATCAATAGTCGTACTGCTGCTGCCATTGCTCTCGTTTGTCATTCTCATTTTTTTTAACCG GCGTCTTCCGGGAAGAGGGGATTTCATCGGGGTAGGGATTCTCGGCGCAGCGTTTGCTCTATCCGCATATATCTTTTGGT CTGTTATTGTACAGGCGTATGATCCGCTTTTTAAAATAGCATGGAGCTTTACCTGGATTGATCTCGGGATGGTTCCGGGA GTAGGTCCGCTGAAAATCAACATGGGTATTGTTATTGATAACCTGACGGCTATCATGCTTACAATGGTGACGCTTATCAG TTTGCTTGTTCATATCTATTCGACAGGTTATATGGCAGGCGACAAGCACTACGGCCGATATTTTGCCTATCTCGGTATCT TTACTTTTTCGATGCTTGGTATTGTTCTGTCCGACAATCTGTTTTCGATCTATATGTTCTGGGAGCTGGTCGGTCTTTCT TCCTACCTCCTGATCGGCTTTTTCTTTGAAAAAGACAGCGCTGCTGATGCCCAGAAAAAAGCTTTTCTTGCCAACCGTGT TGGTGATATAGGAATGTGGCTCGGTATTCTTATTCTCTATTCCCAGTTTCACACCTTCAATTACGACGATATTTTCGGGG CTCTTGCTGCGGGGAAGTTCACGCTCTCTCAAGGATGGTTGACCGCGGCAGGTATTCTTCTCTTCATGGGCTGTGTCGGT AAATCGGCGCAGTTTCCTCTTCATGTATGGCTTCCCGATGCAATGGAAGGTCCTACCCCGGTATCCGCACTTATTCACGC TGCAACCATGGTCGCAGCCGGCGTTTACTTTGTCGCTCGTATTTTTGTGCTTTTGACCCCTGATGCCCTGCATGTCATCT CGTTTATTGGAGCGTTTACAGCATTTATGGCAGCCACGATTGCCATTACCCAGAACGATATTAAAAGAGTGCTGGCCTAC TCAACGGTTTCCCAGCTTGGCTATATGGTGCTTGGCCTTGGAGTCGGAGCTTACTCCGCAGCTTTGTTTCATCTTGTTAC GCATGCGTTTTTCAAGGCATGTCTTTTTCTTGGATCCGGTGCAATTATTCACGCCATGCATCATGAGCAGGATATGCGCT GGATGGGCGGTCTGCGCAAACCGATGCCATGGACCTTCGTTACCTTTACGATTGCAACCCTTGCTCTTGCCGGCCTTCCA CTGACAAGTGGTTTTATGAGCAAAGACGCCATTCTTGCCGGTGCCATAGGCTTTGCTGAAGCTGAGGGCGGCGGGATCTA CTATCTGATTCCGGTTCTCGGCTTTTTTTCAGCCATGCTGACGGCTTTTTATATGGGACGCCAAATCTGGCTGGTCTTTT TTGGAGATAGCCGTACCCATCTGAAACCTGCCGAACATCATGCTCACGGTCATGACGCTCATCATGGTCACGATGATGAA CACGGCGGGGATCATGGTGTTCATGAAGTATCCTGGAATATGAGGGCTCCTCTTGTCGTTCTTGCCGCGCTTTCAGTTTT TGCTGTTTACTCTCCGGATCCACTTGATGGAGCCAAAGGCTGGTTCATGAGCATGGTTCAGACTCCCGAGACAGTTGTGG GCGACAAGCCGCCGGTTGAGCATACCGTCCTGACTGAGGGTAACAGTGGGAATCTGCTCCTTGCAGAATCTGTTGATCAC ACAGAGCTGCCTCATGGTACCGATGTTTCTCACATGCCTGTTGCGGCAACTCACGGTGCTACGGAGGGCGATCATCACAC CGGTCACACGTTTGCTGATCCAAGACAGGCAGCTATTGCTCATGGCGCACATGAAGCTCACAATCCGGCTATCATCATAT CAAGCATTATGGTCGCGCTTGGAATCAGTATGGCCGGCATTGTTTATGTCTTCAAGGTTATCGATCCCGACAGTACCGCC CGGAATATCCGTCCCCTTTATCTCTTTTCATTGAACAAGTGGTACTGGGACGAAATATATGATGCGACCGTCATCAAAGG CTCAATACTGATTTCGAAAATATTTGCCTGGTTTGACAGCAACATCATTGACGGCCTTGTTAACGGTATTGCCGTGACCG TCAGAAAATTCGCATTTGCAAATGGTAGCTTTGACAAATATGTTGTTGACGGACTTGTGAATTTTACCGCATTTTTTGTC AATACCAGTGGTGCACTGCTCAGAAAATTTCAGACCGGAAAGGTGCAGACCTATGTAGTACTCCTTATGATTGCTGTTTG CGGCTATTTTGTCTATTACTTTACACAACTGGTCTATTAA
Upstream 100 bases:
>100_bases ATATTCAAAAGCGTTGATGTGTCGAGCATCGACACCATGAAAGAGTAACACCCCGGATAAAGGGTATCAGTTTTAATTTT TTCTTGTAAACCGAAAGAAC
Downstream 100 bases:
>100_bases GAGATTTACTTTTAATCTGAAAACCTACAGATACGGAACATGCTGAGTTTAATCGTCTTTTTGCCTATTCTTGCCGGTCT TGTGATTCTTGCCGTGCCTT
Product: proton-translocating NADH-quinone oxidoreductase, chain L
Products: NA
Alternate protein names: NADH dehydrogenase I subunit L; NDH-1 subunit L [H]
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MHSLIQLSIVVLLLPLLSFVILIFFNRRLPGRGDFIGVGILGAAFALSAYIFWSVIVQAYDPLFKIAWSFTWIDLGMVPG VGPLKINMGIVIDNLTAIMLTMVTLISLLVHIYSTGYMAGDKHYGRYFAYLGIFTFSMLGIVLSDNLFSIYMFWELVGLS SYLLIGFFFEKDSAADAQKKAFLANRVGDIGMWLGILILYSQFHTFNYDDIFGALAAGKFTLSQGWLTAAGILLFMGCVG KSAQFPLHVWLPDAMEGPTPVSALIHAATMVAAGVYFVARIFVLLTPDALHVISFIGAFTAFMAATIAITQNDIKRVLAY STVSQLGYMVLGLGVGAYSAALFHLVTHAFFKACLFLGSGAIIHAMHHEQDMRWMGGLRKPMPWTFVTFTIATLALAGLP LTSGFMSKDAILAGAIGFAEAEGGGIYYLIPVLGFFSAMLTAFYMGRQIWLVFFGDSRTHLKPAEHHAHGHDAHHGHDDE HGGDHGVHEVSWNMRAPLVVLAALSVFAVYSPDPLDGAKGWFMSMVQTPETVVGDKPPVEHTVLTEGNSGNLLLAESVDH TELPHGTDVSHMPVAATHGATEGDHHTGHTFADPRQAAIAHGAHEAHNPAIIISSIMVALGISMAGIVYVFKVIDPDSTA RNIRPLYLFSLNKWYWDEIYDATVIKGSILISKIFAWFDSNIIDGLVNGIAVTVRKFAFANGSFDKYVVDGLVNFTAFFV NTSGALLRKFQTGKVQTYVVLLMIAVCGYFVYYFTQLVY
Sequences:
>Translated_759_residues MHSLIQLSIVVLLLPLLSFVILIFFNRRLPGRGDFIGVGILGAAFALSAYIFWSVIVQAYDPLFKIAWSFTWIDLGMVPG VGPLKINMGIVIDNLTAIMLTMVTLISLLVHIYSTGYMAGDKHYGRYFAYLGIFTFSMLGIVLSDNLFSIYMFWELVGLS SYLLIGFFFEKDSAADAQKKAFLANRVGDIGMWLGILILYSQFHTFNYDDIFGALAAGKFTLSQGWLTAAGILLFMGCVG KSAQFPLHVWLPDAMEGPTPVSALIHAATMVAAGVYFVARIFVLLTPDALHVISFIGAFTAFMAATIAITQNDIKRVLAY STVSQLGYMVLGLGVGAYSAALFHLVTHAFFKACLFLGSGAIIHAMHHEQDMRWMGGLRKPMPWTFVTFTIATLALAGLP LTSGFMSKDAILAGAIGFAEAEGGGIYYLIPVLGFFSAMLTAFYMGRQIWLVFFGDSRTHLKPAEHHAHGHDAHHGHDDE HGGDHGVHEVSWNMRAPLVVLAALSVFAVYSPDPLDGAKGWFMSMVQTPETVVGDKPPVEHTVLTEGNSGNLLLAESVDH TELPHGTDVSHMPVAATHGATEGDHHTGHTFADPRQAAIAHGAHEAHNPAIIISSIMVALGISMAGIVYVFKVIDPDSTA RNIRPLYLFSLNKWYWDEIYDATVIKGSILISKIFAWFDSNIIDGLVNGIAVTVRKFAFANGSFDKYVVDGLVNFTAFFV NTSGALLRKFQTGKVQTYVVLLMIAVCGYFVYYFTQLVY >Mature_759_residues MHSLIQLSIVVLLLPLLSFVILIFFNRRLPGRGDFIGVGILGAAFALSAYIFWSVIVQAYDPLFKIAWSFTWIDLGMVPG VGPLKINMGIVIDNLTAIMLTMVTLISLLVHIYSTGYMAGDKHYGRYFAYLGIFTFSMLGIVLSDNLFSIYMFWELVGLS SYLLIGFFFEKDSAADAQKKAFLANRVGDIGMWLGILILYSQFHTFNYDDIFGALAAGKFTLSQGWLTAAGILLFMGCVG KSAQFPLHVWLPDAMEGPTPVSALIHAATMVAAGVYFVARIFVLLTPDALHVISFIGAFTAFMAATIAITQNDIKRVLAY STVSQLGYMVLGLGVGAYSAALFHLVTHAFFKACLFLGSGAIIHAMHHEQDMRWMGGLRKPMPWTFVTFTIATLALAGLP LTSGFMSKDAILAGAIGFAEAEGGGIYYLIPVLGFFSAMLTAFYMGRQIWLVFFGDSRTHLKPAEHHAHGHDAHHGHDDE HGGDHGVHEVSWNMRAPLVVLAALSVFAVYSPDPLDGAKGWFMSMVQTPETVVGDKPPVEHTVLTEGNSGNLLLAESVDH TELPHGTDVSHMPVAATHGATEGDHHTGHTFADPRQAAIAHGAHEAHNPAIIISSIMVALGISMAGIVYVFKVIDPDSTA RNIRPLYLFSLNKWYWDEIYDATVIKGSILISKIFAWFDSNIIDGLVNGIAVTVRKFAFANGSFDKYVVDGLVNFTAFFV NTSGALLRKFQTGKVQTYVVLLMIAVCGYFVYYFTQLVY
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1009
COG function: function code CP; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 5 family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=377, Percent_Identity=38.4615384615385, Blast_Score=239, Evalue=7e-63, Organism=Escherichia coli, GI1788614, Length=543, Percent_Identity=41.9889502762431, Blast_Score=350, Evalue=2e-97, Organism=Escherichia coli, GI1788829, Length=431, Percent_Identity=34.1067285382831, Blast_Score=181, Evalue=2e-46, Organism=Escherichia coli, GI1788827, Length=347, Percent_Identity=31.1239193083574, Blast_Score=134, Evalue=3e-32, Organism=Escherichia coli, GI1788831, Length=339, Percent_Identity=30.0884955752212, Blast_Score=131, Evalue=2e-31, Organism=Escherichia coli, GI1788613, Length=414, Percent_Identity=25.6038647342995, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI145693160, Length=358, Percent_Identity=26.536312849162, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI2367154, Length=188, Percent_Identity=29.2553191489362, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001750 - InterPro: IPR001516 - InterPro: IPR002128 - InterPro: IPR003945 - InterPro: IPR018393 [H]
Pfam domain/function: PF00361 Oxidored_q1; PF01010 Oxidored_q1_C; PF00662 Oxidored_q1_N [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 82993; Mature: 82993
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSLIQLSIVVLLLPLLSFVILIFFNRRLPGRGDFIGVGILGAAFALSAYIFWSVIVQAY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH DPLFKIAWSFTWIDLGMVPGVGPLKINMGIVIDNLTAIMLTMVTLISLLVHIYSTGYMAG HHHHHHHHHHHEEEECCCCCCCCEEEEECEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC DKHYGRYFAYLGIFTFSMLGIVLSDNLFSIYMFWELVGLSSYLLIGFFFEKDSAADAQKK CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHH AFLANRVGDIGMWLGILILYSQFHTFNYDDIFGALAAGKFTLSQGWLTAAGILLFMGCVG HHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCC KSAQFPLHVWLPDAMEGPTPVSALIHAATMVAAGVYFVARIFVLLTPDALHVISFIGAFT CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AFMAATIAITQNDIKRVLAYSTVSQLGYMVLGLGVGAYSAALFHLVTHAFFKACLFLGSG HHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC AIIHAMHHEQDMRWMGGLRKPMPWTFVTFTIATLALAGLPLTSGFMSKDAILAGAIGFAE CEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEE AEGGGIYYLIPVLGFFSAMLTAFYMGRQIWLVFFGDSRTHLKPAEHHAHGHDAHHGHDDE CCCCCEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCC HGGDHGVHEVSWNMRAPLVVLAALSVFAVYSPDPLDGAKGWFMSMVQTPETVVGDKPPVE CCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCC HTVLTEGNSGNLLLAESVDHTELPHGTDVSHMPVAATHGATEGDHHTGHTFADPRQAAIA CEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHH HGAHEAHNPAIIISSIMVALGISMAGIVYVFKVIDPDSTARNIRPLYLFSLNKWYWDEIY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEECCCHHHHHHH DATVIKGSILISKIFAWFDSNIIDGLVNGIAVTVRKFAFANGSFDKYVVDGLVNFTAFFV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEE NTSGALLRKFQTGKVQTYVVLLMIAVCGYFVYYFTQLVY ECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHSLIQLSIVVLLLPLLSFVILIFFNRRLPGRGDFIGVGILGAAFALSAYIFWSVIVQAY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH DPLFKIAWSFTWIDLGMVPGVGPLKINMGIVIDNLTAIMLTMVTLISLLVHIYSTGYMAG HHHHHHHHHHHEEEECCCCCCCCEEEEECEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC DKHYGRYFAYLGIFTFSMLGIVLSDNLFSIYMFWELVGLSSYLLIGFFFEKDSAADAQKK CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHH AFLANRVGDIGMWLGILILYSQFHTFNYDDIFGALAAGKFTLSQGWLTAAGILLFMGCVG HHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCC KSAQFPLHVWLPDAMEGPTPVSALIHAATMVAAGVYFVARIFVLLTPDALHVISFIGAFT CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AFMAATIAITQNDIKRVLAYSTVSQLGYMVLGLGVGAYSAALFHLVTHAFFKACLFLGSG HHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC AIIHAMHHEQDMRWMGGLRKPMPWTFVTFTIATLALAGLPLTSGFMSKDAILAGAIGFAE CEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEE AEGGGIYYLIPVLGFFSAMLTAFYMGRQIWLVFFGDSRTHLKPAEHHAHGHDAHHGHDDE CCCCCEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCC HGGDHGVHEVSWNMRAPLVVLAALSVFAVYSPDPLDGAKGWFMSMVQTPETVVGDKPPVE CCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCC HTVLTEGNSGNLLLAESVDHTELPHGTDVSHMPVAATHGATEGDHHTGHTFADPRQAAIA CEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHH HGAHEAHNPAIIISSIMVALGISMAGIVYVFKVIDPDSTARNIRPLYLFSLNKWYWDEIY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEECCCHHHHHHH DATVIKGSILISKIFAWFDSNIIDGLVNGIAVTVRKFAFANGSFDKYVVDGLVNFTAFFV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEE NTSGALLRKFQTGKVQTYVVLLMIAVCGYFVYYFTQLVY ECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]