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The map label for this gene is yhaM [H]

Identifier: 118578881

GI number: 118578881

Start: 461283

End: 462416

Strand: Direct

Name: yhaM [H]

Synonym: Ppro_0440

Alternate gene names: 118578881

Gene position: 461283-462416 (Clockwise)

Preceding gene: 118578880

Following gene: 118578883

Centisome position: 11.51

GC content: 57.41

Gene sequence:

>1134_bases
GTGACACGACAGTATGTTGCGGATATAAAGGACCGGGATCCGGTCAAGGGAGTCTTTCTGGTCAAGGAAAAGATCATGGC
CATGGCCAAGAACGGCAAACCGTATATGAATCTGCGGTTCATGGACAAGAGCGGTGAGGTGGACGCCAAACTGTGGGACA
ACACGGACGTTCTGGACAAGCTCTTCGACAAGAATGACTTTGTCAGGGTGCGTGGCAAAGCCTCGGTCTATATGAACAAA
ATGCAGGTCGTGGTGGCCGAGATCAGTAGGGTCCCGGATGAGGAGGTCAACCTGGCCGACTTCCTGCCCGAATCGCCCCG
CAGCATCGGAGAGATGCGCCAGGAACTGCGCGACGTGGTCGGCGCTCTTGACAATTCCCACCTGAAGGGGCTGATGGAGG
CATTTCTGGCCGACGAGCCGCTGATGGATCAGTACTGCAAAGCCCCGGCAGCCAAGGGGATGCACCATGTCTACCTGGGA
GGGTTGCTGGAGCATTCACTGGCGCTGGTCAGGCTGATCAGGGCCATCGTACCGTTGTACGAGGGGATCAACGAGGACCT
GCTGGTGGTGGGTGCCCTGCTGCACGATGTTGGCAAGATCCAGGAGATGAGTTACGAGCGTGCCTTCGACTATACCGATG
CCGGCAAGTTGCTGGGGCATATCACCATCGGCGTGGAACTGGTGGAAGACAAAATCCGTCAGGTGGATGGTTTTCCACGG
GAACTGTCGCTCTTGCTGAAACATATGCTGCTCTCACATCATGGCCAGTATGAATTCGGCTCACCCAAGCGCCCCAAGAC
CGTTGAAGCCACCATCCTGAACTACCTGGATGATATGGATTCCAAGATCAACGGAATCCGCACCCATATCGCCAAGGAGA
CCGCCAGCAGTTCCCGCTGGACCGCCCATCACCGGCTGTACGACCGCTATTTCTTCAAGGTGAACGGTCTGGACGGGGAG
GAGGAACCTGTCTGCGCCCGCGAGGAGGGTTGCCAGGTGGTACCGCTGGAAGAGCTTCCCCCGCCGGCGGTGCAGCGGCC
CGTTCCCCGCAGGGAGAAACAGGTGTTCAGCAACCAGCCTCTGCGCAAGTTGGAAAATTTGAACTTGTTCGGCAACGGGT
CCAACGAAGAATAG

Upstream 100 bases:

>100_bases
AGTCTGGATGGTCGGGCGTGAAAAGATGATGGGCAGAGAGTAACTTTCATCCGGCAGCTGGGGTCTTCCAGCTGCCGAAT
CCATGTATAAGGAGCATCAG

Downstream 100 bases:

>100_bases
AATCTTCCTGGCCCGGTGAAATGCACAAACGCCCCTCCGGATCGATTCCGGAGGGGCGTTTGTGCGAGAGGAATGCTTCA
GCCGGCCGTTATTTGCCGTT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTRQYVADIKDRDPVKGVFLVKEKIMAMAKNGKPYMNLRFMDKSGEVDAKLWDNTDVLDKLFDKNDFVRVRGKASVYMNK
MQVVVAEISRVPDEEVNLADFLPESPRSIGEMRQELRDVVGALDNSHLKGLMEAFLADEPLMDQYCKAPAAKGMHHVYLG
GLLEHSLALVRLIRAIVPLYEGINEDLLVVGALLHDVGKIQEMSYERAFDYTDAGKLLGHITIGVELVEDKIRQVDGFPR
ELSLLLKHMLLSHHGQYEFGSPKRPKTVEATILNYLDDMDSKINGIRTHIAKETASSSRWTAHHRLYDRYFFKVNGLDGE
EEPVCAREEGCQVVPLEELPPPAVQRPVPRREKQVFSNQPLRKLENLNLFGNGSNEE

Sequences:

>Translated_377_residues
MTRQYVADIKDRDPVKGVFLVKEKIMAMAKNGKPYMNLRFMDKSGEVDAKLWDNTDVLDKLFDKNDFVRVRGKASVYMNK
MQVVVAEISRVPDEEVNLADFLPESPRSIGEMRQELRDVVGALDNSHLKGLMEAFLADEPLMDQYCKAPAAKGMHHVYLG
GLLEHSLALVRLIRAIVPLYEGINEDLLVVGALLHDVGKIQEMSYERAFDYTDAGKLLGHITIGVELVEDKIRQVDGFPR
ELSLLLKHMLLSHHGQYEFGSPKRPKTVEATILNYLDDMDSKINGIRTHIAKETASSSRWTAHHRLYDRYFFKVNGLDGE
EEPVCAREEGCQVVPLEELPPPAVQRPVPRREKQVFSNQPLRKLENLNLFGNGSNEE
>Mature_376_residues
TRQYVADIKDRDPVKGVFLVKEKIMAMAKNGKPYMNLRFMDKSGEVDAKLWDNTDVLDKLFDKNDFVRVRGKASVYMNKM
QVVVAEISRVPDEEVNLADFLPESPRSIGEMRQELRDVVGALDNSHLKGLMEAFLADEPLMDQYCKAPAAKGMHHVYLGG
LLEHSLALVRLIRAIVPLYEGINEDLLVVGALLHDVGKIQEMSYERAFDYTDAGKLLGHITIGVELVEDKIRQVDGFPRE
LSLLLKHMLLSHHGQYEFGSPKRPKTVEATILNYLDDMDSKINGIRTHIAKETASSSRWTAHHRLYDRYFFKVNGLDGEE
EPVCAREEGCQVVPLEELPPPAVQRPVPRREKQVFSNQPLRKLENLNLFGNGSNEE

Specific function: Shows a 3'-5' exoribonuclease activity [H]

COG id: COG3481

COG function: function code R; Predicted HD-superfamily hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yhaM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020873
- InterPro:   IPR003607
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 42812; Mature: 42681

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQYVADIKDRDPVKGVFLVKEKIMAMAKNGKPYMNLRFMDKSGEVDAKLWDNTDVLDK
CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEECCCHHHHHH
LFDKNDFVRVRGKASVYMNKMQVVVAEISRVPDEEVNLADFLPESPRSIGEMRQELRDVV
HHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHH
GALDNSHLKGLMEAFLADEPLMDQYCKAPAAKGMHHVYLGGLLEHSLALVRLIRAIVPLY
HHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EGINEDLLVVGALLHDVGKIQEMSYERAFDYTDAGKLLGHITIGVELVEDKIRQVDGFPR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ELSLLLKHMLLSHHGQYEFGSPKRPKTVEATILNYLDDMDSKINGIRTHIAKETASSSRW
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TAHHRLYDRYFFKVNGLDGEEEPVCAREEGCQVVPLEELPPPAVQRPVPRREKQVFSNQP
HHHHHHHHHHEEEEECCCCCCCCCCHHHCCCEEEEHHCCCCCHHCCCCCHHHHHHHCCCC
LRKLENLNLFGNGSNEE
HHHHHCCCEECCCCCCC
>Mature Secondary Structure 
TRQYVADIKDRDPVKGVFLVKEKIMAMAKNGKPYMNLRFMDKSGEVDAKLWDNTDVLDK
CCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEECCCHHHHHH
LFDKNDFVRVRGKASVYMNKMQVVVAEISRVPDEEVNLADFLPESPRSIGEMRQELRDVV
HHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHH
GALDNSHLKGLMEAFLADEPLMDQYCKAPAAKGMHHVYLGGLLEHSLALVRLIRAIVPLY
HHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EGINEDLLVVGALLHDVGKIQEMSYERAFDYTDAGKLLGHITIGVELVEDKIRQVDGFPR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ELSLLLKHMLLSHHGQYEFGSPKRPKTVEATILNYLDDMDSKINGIRTHIAKETASSSRW
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TAHHRLYDRYFFKVNGLDGEEEPVCAREEGCQVVPLEELPPPAVQRPVPRREKQVFSNQP
HHHHHHHHHHEEEEECCCCCCCCCCHHHCCCEEEEHHCCCCCHHCCCCCHHHHHHHCCCC
LRKLENLNLFGNGSNEE
HHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA