Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118578880
Identifier: 118578880
GI number: 118578880
Start: 459605
End: 461203
Strand: Direct
Name: 118578880
Synonym: Ppro_0439
Alternate gene names: NA
Gene position: 459605-461203 (Clockwise)
Preceding gene: 118578879
Following gene: 118578881
Centisome position: 11.47
GC content: 65.48
Gene sequence:
>1599_bases ATGCCGTTTATCTTTCGTAATCTCAGCATATCTCCCCAGGATGATGAAAACTGCCTTCCCCTGCTGGTGGCCGGCCAACT GGGGTTGCCCCCCGCGTTGTTGCGGGATTTGCGTATCGTCCGCAAGGGGATCGATGCCCGCAAGAAGCCGCGGGTAAAAC TGGTGTACACCATTTCGTTCATGGTTGCCGATGAGCGCTCCTTGCGTTCACGCATCGCCGACGCCACGGCGCCCCATGGG CTGGAGTGGGTGCCGGAAGTGGAGCCTGCCCGGTTTCCCTCACTGCGCAGCAGTGAGAGGATCGTCATAGTGGGCAGCGG TCCGGCCGGTCTGTTCGCCGCATTGCGTCTAACCGAGTACGGGTTGAACGCCACGCTCATTGAGCGGGGGCAGCCGGTGG AGCAGCGGGCGCGGGACGTACAGCAGTTCTGGAGAAACGGGATACTCAACCCAGAGAGCAATGTGCAGTTCGGCGAAGGG GGGGCGGGAACCTTTTCCGATGGCAAGCTGACGAGCCGTTCCCGGGATGCGCTGGTGCCCTGGGTTCTGGAGCGGCTGGT GGATTTCGGCGCCCAGCCCGAGGTCCGCTACCTGGCCAAGCCGCACATCGGCACCGACCGCCTGCGCCATGTGGTTGCCA ACCTGCGCGCCCATCTGCTGGAGCGGGGGACTAGGGTCTGTTTCGGCAGCCGCCTCAGTGACCTGATCGTGCGCGATGGC CGCTGCCGTGCCATCGTGGTCAACGACTGCGAGGAGCTGGCATGCGACCGGCTGATCCTGGCCACCGGCCACAGCGCCCG GGATACCTATGAACTGCTGCATCGCCGCGGGGTGCCGATGGAGCGCAAGGCCTTCGCCATGGGGCTGCGCGTGGAGCACC CCCAGGCACTGATCGATGCTATCCAGTACGGCGGCACGCGCCACCCGAATCTGCCCCCGGCCGACTACGCCCTGGCCTGG AACAACCGCGGCAGTGGTCGCAGCGCCTATTCCTTCTGCATGTGTCCCGGCGGCGTGGTGGTGGCGGGGGCTTCGGAGCA GGGGGGAGTGGTCACCAATGGCATGAGCGGTCAACTGCGCAATTCTCCCTTTGCCAATAGCGCGCTGGTGGTCAATGTGA CCCCGGACGATTTCGGCGGCCCGGGGCCGCTGGCGGGCATCCATTTCCAGCGTCACTGGGAGCGCAAGGCCTTCAGCGCT GGGGGGGGCGGCTTTCGCGCCCCGGCCCAGGGGGTGCTTTCGTTTATGGGGCTCCCCGGCCAAAGGGCGCTCTCCAGCAG CTATCGCCCCGGCATCGTCGAGTCCGAACTGGACCAGGTCCTGCCCCCCCTTGTGATCTCCACGTTGCGGGAGGGTCTTG TCGACTTCAACCGGCGCATGCGCGGCTTCATCTGCGCCGAGGCTGTCCTGGTCGGCATCGAATCGCGCACTTCCGCACCG GTACGGATAGTGCGGGACGAACGCTTCGAATCCATCGGTATCGGCAGGCTCTATCCGGCCGGCGAAGGAGCCGGTTACGC CGGCGGAATCATGAGTTCGGCCATTGACGGCGTCAGGATCGCCGATACCATCGCGGCCAGTCTGGATGGTCGGGCGTGA
Upstream 100 bases:
>100_bases GGGGGCCAGGGTGCATATCCCCAAATCGATGGCTCCCCAGGATATCGTCATCCTCGTGGAACAGCTCCTGAAGAGGGATG CACGCCAGCCGGACTGACCA
Downstream 100 bases:
>100_bases AAAGATGATGGGCAGAGAGTAACTTTCATCCGGCAGCTGGGGTCTTCCAGCTGCCGAATCCATGTATAAGGAGCATCAGG TGACACGACAGTATGTTGCG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MPFIFRNLSISPQDDENCLPLLVAGQLGLPPALLRDLRIVRKGIDARKKPRVKLVYTISFMVADERSLRSRIADATAPHG LEWVPEVEPARFPSLRSSERIVIVGSGPAGLFAALRLTEYGLNATLIERGQPVEQRARDVQQFWRNGILNPESNVQFGEG GAGTFSDGKLTSRSRDALVPWVLERLVDFGAQPEVRYLAKPHIGTDRLRHVVANLRAHLLERGTRVCFGSRLSDLIVRDG RCRAIVVNDCEELACDRLILATGHSARDTYELLHRRGVPMERKAFAMGLRVEHPQALIDAIQYGGTRHPNLPPADYALAW NNRGSGRSAYSFCMCPGGVVVAGASEQGGVVTNGMSGQLRNSPFANSALVVNVTPDDFGGPGPLAGIHFQRHWERKAFSA GGGGFRAPAQGVLSFMGLPGQRALSSSYRPGIVESELDQVLPPLVISTLREGLVDFNRRMRGFICAEAVLVGIESRTSAP VRIVRDERFESIGIGRLYPAGEGAGYAGGIMSSAIDGVRIADTIAASLDGRA
Sequences:
>Translated_532_residues MPFIFRNLSISPQDDENCLPLLVAGQLGLPPALLRDLRIVRKGIDARKKPRVKLVYTISFMVADERSLRSRIADATAPHG LEWVPEVEPARFPSLRSSERIVIVGSGPAGLFAALRLTEYGLNATLIERGQPVEQRARDVQQFWRNGILNPESNVQFGEG GAGTFSDGKLTSRSRDALVPWVLERLVDFGAQPEVRYLAKPHIGTDRLRHVVANLRAHLLERGTRVCFGSRLSDLIVRDG RCRAIVVNDCEELACDRLILATGHSARDTYELLHRRGVPMERKAFAMGLRVEHPQALIDAIQYGGTRHPNLPPADYALAW NNRGSGRSAYSFCMCPGGVVVAGASEQGGVVTNGMSGQLRNSPFANSALVVNVTPDDFGGPGPLAGIHFQRHWERKAFSA GGGGFRAPAQGVLSFMGLPGQRALSSSYRPGIVESELDQVLPPLVISTLREGLVDFNRRMRGFICAEAVLVGIESRTSAP VRIVRDERFESIGIGRLYPAGEGAGYAGGIMSSAIDGVRIADTIAASLDGRA >Mature_531_residues PFIFRNLSISPQDDENCLPLLVAGQLGLPPALLRDLRIVRKGIDARKKPRVKLVYTISFMVADERSLRSRIADATAPHGL EWVPEVEPARFPSLRSSERIVIVGSGPAGLFAALRLTEYGLNATLIERGQPVEQRARDVQQFWRNGILNPESNVQFGEGG AGTFSDGKLTSRSRDALVPWVLERLVDFGAQPEVRYLAKPHIGTDRLRHVVANLRAHLLERGTRVCFGSRLSDLIVRDGR CRAIVVNDCEELACDRLILATGHSARDTYELLHRRGVPMERKAFAMGLRVEHPQALIDAIQYGGTRHPNLPPADYALAWN NRGSGRSAYSFCMCPGGVVVAGASEQGGVVTNGMSGQLRNSPFANSALVVNVTPDDFGGPGPLAGIHFQRHWERKAFSAG GGGFRAPAQGVLSFMGLPGQRALSSSYRPGIVESELDQVLPPLVISTLREGLVDFNRRMRGFICAEAVLVGIESRTSAPV RIVRDERFESIGIGRLYPAGEGAGYAGGIMSSAIDGVRIADTIAASLDGRA
Specific function: Unknown
COG id: COG2509
COG function: function code R; Uncharacterized FAD-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 57726; Mature: 57595
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFIFRNLSISPQDDENCLPLLVAGQLGLPPALLRDLRIVRKGIDARKKPRVKLVYTISF CCEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE MVADERSLRSRIADATAPHGLEWVPEVEPARFPSLRSSERIVIVGSGPAGLFAALRLTEY EEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHC GLNATLIERGQPVEQRARDVQQFWRNGILNPESNVQFGEGGAGTFSDGKLTSRSRDALVP CCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHH WVLERLVDFGAQPEVRYLAKPHIGTDRLRHVVANLRAHLLERGTRVCFGSRLSDLIVRDG HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC RCRAIVVNDCEELACDRLILATGHSARDTYELLHRRGVPMERKAFAMGLRVEHPQALIDA CEEEEEECCHHHHHHCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCEECCHHHHHHH IQYGGTRHPNLPPADYALAWNNRGSGRSAYSFCMCPGGVVVAGASEQGGVVTNGMSGQLR HHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCC NSPFANSALVVNVTPDDFGGPGPLAGIHFQRHWERKAFSAGGGGFRAPAQGVLSFMGLPG CCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC QRALSSSYRPGIVESELDQVLPPLVISTLREGLVDFNRRMRGFICAEAVLVGIESRTSAP HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VRIVRDERFESIGIGRLYPAGEGAGYAGGIMSSAIDGVRIADTIAASLDGRA EEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCC >Mature Secondary Structure PFIFRNLSISPQDDENCLPLLVAGQLGLPPALLRDLRIVRKGIDARKKPRVKLVYTISF CEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE MVADERSLRSRIADATAPHGLEWVPEVEPARFPSLRSSERIVIVGSGPAGLFAALRLTEY EEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHC GLNATLIERGQPVEQRARDVQQFWRNGILNPESNVQFGEGGAGTFSDGKLTSRSRDALVP CCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHH WVLERLVDFGAQPEVRYLAKPHIGTDRLRHVVANLRAHLLERGTRVCFGSRLSDLIVRDG HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC RCRAIVVNDCEELACDRLILATGHSARDTYELLHRRGVPMERKAFAMGLRVEHPQALIDA CEEEEEECCHHHHHHCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCEECCHHHHHHH IQYGGTRHPNLPPADYALAWNNRGSGRSAYSFCMCPGGVVVAGASEQGGVVTNGMSGQLR HHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCC NSPFANSALVVNVTPDDFGGPGPLAGIHFQRHWERKAFSAGGGGFRAPAQGVLSFMGLPG CCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC QRALSSSYRPGIVESELDQVLPPLVISTLREGLVDFNRRMRGFICAEAVLVGIESRTSAP HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VRIVRDERFESIGIGRLYPAGEGAGYAGGIMSSAIDGVRIADTIAASLDGRA EEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396545 [H]