Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118578875
Identifier: 118578875
GI number: 118578875
Start: 455826
End: 456695
Strand: Direct
Name: 118578875
Synonym: Ppro_0434
Alternate gene names: NA
Gene position: 455826-456695 (Clockwise)
Preceding gene: 118578874
Following gene: 118578876
Centisome position: 11.37
GC content: 61.95
Gene sequence:
>870_bases GTGTCCGACAGAGAGACCAACAACGCCGATCACGGTGCAAGTACACCCGGAACGATCCTCAGGAGATGCCGCGAATTCCG CGGCGCTTCCATCCAGGACGCTGCGGGAGCGACCAAGATTGCCGAGCATCATCTCAGGGCGCTGGAACAGGACCGCTTCA CCGAGTTTGCCAACCCGGCATATCTGAAAGGTTTTTTGCGCATCTATTCCGACTATCTGGGCCTCAGTCCGGACGACATG ATCCGTTTGTGCGAGCGGCAGCATGTGCCGCCAGGAGAGGGCGGCGACGGCCGGCCGGAGAAAAAACGGTCGTTCAGGAG CGTGAGACGTTCCTTTCCCTGGAAGAAGCTGTTTCTGCCGGCCGTTCTGCTGCTGATGATGATCGTCACTTCGGTCCTCC TCGACCATTCCCCTCTTCCCCGGCGTCATCTTCCTCGTCCCCTGCCTCTGCCGACTGCCGTTCCCGTGGCGGCGATCCAG CCGGCGCTCTCCAGTTCGGCAACCGTTGCGCTTACCGAGGAGGCAGAACCGGTGGTCGAAGCCGAACAACCCCAGAGTCA TGACGAGGCTCAGGCAGAGAAGGGTGCTCACCCCGATGCGGCGGCTGAAGTCTCCCGGGGCGTAGTGGTGCGCCTGAGGG TCATTCATAACGCTTCCCTGGCCGTTACCATGGACGGCACCACATCCCAGCACTACGAGCTGACCAGTGGCGATACCTTT GAGTGGAAAGCCGACCGGACCATTGCCCTGGAGCTGTCCAACGCCGGCAGCGCGGTCGTTGAGTTGAACGGCAGATCACT CGGTTCCCTGGGCGCGAACGGTGCCCCGGTATACGTGCTGCTGGACGCCAACGGCATCAGGCAGCAGTAG
Upstream 100 bases:
>100_bases CACGAAACGCCTTCCGTGAAGTCATCCGTATCAAGCCGAACACTGAGTTGGGGCGTTCGGCCATGGGGTACCTGGAACTG CTGAAGTAAGTGAGGCTTGC
Downstream 100 bases:
>100_bases GCATCAGCTGCTCTCCATGGCGGGGCGTAAAGCGATGTGCTCGCCGCCCCCCTGAAGTTCCCCTGTGCCCCCTCTCCGCT CTCATGCCCCGGTTTATCAA
Product: transcriptional regulator
Products: NA
Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSDRETNNADHGASTPGTILRRCREFRGASIQDAAGATKIAEHHLRALEQDRFTEFANPAYLKGFLRIYSDYLGLSPDDM IRLCERQHVPPGEGGDGRPEKKRSFRSVRRSFPWKKLFLPAVLLLMMIVTSVLLDHSPLPRRHLPRPLPLPTAVPVAAIQ PALSSSATVALTEEAEPVVEAEQPQSHDEAQAEKGAHPDAAAEVSRGVVVRLRVIHNASLAVTMDGTTSQHYELTSGDTF EWKADRTIALELSNAGSAVVELNGRSLGSLGANGAPVYVLLDANGIRQQ
Sequences:
>Translated_289_residues MSDRETNNADHGASTPGTILRRCREFRGASIQDAAGATKIAEHHLRALEQDRFTEFANPAYLKGFLRIYSDYLGLSPDDM IRLCERQHVPPGEGGDGRPEKKRSFRSVRRSFPWKKLFLPAVLLLMMIVTSVLLDHSPLPRRHLPRPLPLPTAVPVAAIQ PALSSSATVALTEEAEPVVEAEQPQSHDEAQAEKGAHPDAAAEVSRGVVVRLRVIHNASLAVTMDGTTSQHYELTSGDTF EWKADRTIALELSNAGSAVVELNGRSLGSLGANGAPVYVLLDANGIRQQ >Mature_288_residues SDRETNNADHGASTPGTILRRCREFRGASIQDAAGATKIAEHHLRALEQDRFTEFANPAYLKGFLRIYSDYLGLSPDDMI RLCERQHVPPGEGGDGRPEKKRSFRSVRRSFPWKKLFLPAVLLLMMIVTSVLLDHSPLPRRHLPRPLPLPTAVPVAAIQP ALSSSATVALTEEAEPVVEAEQPQSHDEAQAEKGAHPDAAAEVSRGVVVRLRVIHNASLAVTMDGTTSQHYELTSGDTFE WKADRTIALELSNAGSAVVELNGRSLGSLGANGAPVYVLLDANGIRQQ
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31449; Mature: 31318
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRETNNADHGASTPGTILRRCREFRGASIQDAAGATKIAEHHLRALEQDRFTEFANPA CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCHH YLKGFLRIYSDYLGLSPDDMIRLCERQHVPPGEGGDGRPEKKRSFRSVRRSFPWKKLFLP HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH AVLLLMMIVTSVLLDHSPLPRRHLPRPLPLPTAVPVAAIQPALSSSATVALTEEAEPVVE HHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCC AEQPQSHDEAQAEKGAHPDAAAEVSRGVVVRLRVIHNASLAVTMDGTTSQHYELTSGDTF CCCCCCCHHHHHHCCCCCCHHHHHHCCEEEEEEEEECCEEEEEECCCCCCCEEECCCCEE EWKADRTIALELSNAGSAVVELNGRSLGSLGANGAPVYVLLDANGIRQQ EEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure SDRETNNADHGASTPGTILRRCREFRGASIQDAAGATKIAEHHLRALEQDRFTEFANPA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCHH YLKGFLRIYSDYLGLSPDDMIRLCERQHVPPGEGGDGRPEKKRSFRSVRRSFPWKKLFLP HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH AVLLLMMIVTSVLLDHSPLPRRHLPRPLPLPTAVPVAAIQPALSSSATVALTEEAEPVVE HHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCC AEQPQSHDEAQAEKGAHPDAAAEVSRGVVVRLRVIHNASLAVTMDGTTSQHYELTSGDTF CCCCCCCHHHHHHCCCCCCHHHHHHCCEEEEEEEEECCEEEEEECCCCCCCEEECCCCEE EWKADRTIALELSNAGSAVVELNGRSLGSLGANGAPVYVLLDANGIRQQ EEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA