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The map label for this gene is ydiK [H]

Identifier: 118578847

GI number: 118578847

Start: 416636

End: 417760

Strand: Direct

Name: ydiK [H]

Synonym: Ppro_0405

Alternate gene names: 118578847

Gene position: 416636-417760 (Clockwise)

Preceding gene: 118578846

Following gene: 118578848

Centisome position: 10.4

GC content: 64.62

Gene sequence:

>1125_bases
ATGAAACCTGCTACCCCCTCCGCGGACATCGCTCGCACCACCCTGGCGGTGCTGTTCATCGCTATCCTGATCAGCGCCAG
CTTCTGGGTGCTGCGCCCCTTTCTTACGGCGCTGGTCTGGGCAACCATGATTGTCATCACCACCTGGCCGCTGATGCTCT
CGCTCCAGAAGTGCCTGTGGGGAAAGCGGGCACTGGCGGTTGCGGCAATGAGTGCCGCGCTCTTGCTCCTGCTGGTTATC
CCCCTGACCCTGGCAATCGTCAGTATCGTCGAACGCTCCGATGACATCGTCGGTTGGGCCAGGTCACTGGCCATGTACAC
GCCGGCACCGCCACCGGCCTGGGTGGAGCAGGTCCCTGTGATCGGGCCGAAACTGGCCGAACGCTGGCGCACTCTGGCGA
CGATCGACCCGGTGGAGTTGTCCGCCCGTCTGGCGCCCCATGTCAAGGCAATCGTCGGCTGGATTGTGGCCCAGACAGGG
AGCGTCATGATGATGGTCGTGCAGTTTCTGCTGACCGTGATCATCAGCGCGGTGCTCTACGCCAGCGGTGAGAAAGCGGC
CATGGGGGTCCGCCTCTTTGCCCATCGGCTTGGCGGCAAGAGCGGTGAAGACGCCTCCATCCTGGCCGCAAAGGCCATCC
GCGGCGTTGCCCTCGGCGTGGTCGTCACCGCCCTGGCCCAGGCCCTGCTGGGCGGCATCGGTCTGGCCCTGTCCGGGGTT
CCGGCAGCCACGCTGCTGACTGCGGTCATGTTCATCCTCTGCGTGGCCCAGCTCGGTCCCTCCCTGGTGCTCATCCCCGC
CGTTATCTGGCTCTTCTGGAAAGACCAGACCATGTGGGGCTCTATCATGGTGGTCTGGGCGGTTGTCGTGGGCACCATGG
ACAATTTCATCCGGCCGATCCTGATCAAGAAGGGCGCCGACCTGCCCCTGCTCTTGATCTTTGCCGGGGTGATCGGCGGC
TTGATCGCCTTCGGCGTGATCGGCCTGTTCATCGGGCCGGTGATGCTGGCCGTGACCTACACCCTGCTGGTTGCCTGGGT
GATGGGGCCGGAGCCGACGGAGGAGGCCGCTGCTGGAAGCGATTTCGGTACGGGTCACCCTCAACGGGAAGACAGCGCCC
TGTGA

Upstream 100 bases:

>100_bases
GAGTGAGCAGTTTCGCCCATTGCTCATCCCCCAGCTGACACCGGCGGAAGCGGCAGGCCGGTCGCTCCCGCCACATTACG
ACGAGTGGAGAATACCATCA

Downstream 100 bases:

>100_bases
CCCTGCCTGTTGGGCAGGGCCAGGGGACCATGAACATACATCCGAAGGGAGTACCGTCATGCAGGAGAACATATCACCTA
CGAATGAAGCGAAACGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKPATPSADIARTTLAVLFIAILISASFWVLRPFLTALVWATMIVITTWPLMLSLQKCLWGKRALAVAAMSAALLLLLVI
PLTLAIVSIVERSDDIVGWARSLAMYTPAPPPAWVEQVPVIGPKLAERWRTLATIDPVELSARLAPHVKAIVGWIVAQTG
SVMMMVVQFLLTVIISAVLYASGEKAAMGVRLFAHRLGGKSGEDASILAAKAIRGVALGVVVTALAQALLGGIGLALSGV
PAATLLTAVMFILCVAQLGPSLVLIPAVIWLFWKDQTMWGSIMVVWAVVVGTMDNFIRPILIKKGADLPLLLIFAGVIGG
LIAFGVIGLFIGPVMLAVTYTLLVAWVMGPEPTEEAAAGSDFGTGHPQREDSAL

Sequences:

>Translated_374_residues
MKPATPSADIARTTLAVLFIAILISASFWVLRPFLTALVWATMIVITTWPLMLSLQKCLWGKRALAVAAMSAALLLLLVI
PLTLAIVSIVERSDDIVGWARSLAMYTPAPPPAWVEQVPVIGPKLAERWRTLATIDPVELSARLAPHVKAIVGWIVAQTG
SVMMMVVQFLLTVIISAVLYASGEKAAMGVRLFAHRLGGKSGEDASILAAKAIRGVALGVVVTALAQALLGGIGLALSGV
PAATLLTAVMFILCVAQLGPSLVLIPAVIWLFWKDQTMWGSIMVVWAVVVGTMDNFIRPILIKKGADLPLLLIFAGVIGG
LIAFGVIGLFIGPVMLAVTYTLLVAWVMGPEPTEEAAAGSDFGTGHPQREDSAL
>Mature_374_residues
MKPATPSADIARTTLAVLFIAILISASFWVLRPFLTALVWATMIVITTWPLMLSLQKCLWGKRALAVAAMSAALLLLLVI
PLTLAIVSIVERSDDIVGWARSLAMYTPAPPPAWVEQVPVIGPKLAERWRTLATIDPVELSARLAPHVKAIVGWIVAQTG
SVMMMVVQFLLTVIISAVLYASGEKAAMGVRLFAHRLGGKSGEDASILAAKAIRGVALGVVVTALAQALLGGIGLALSGV
PAATLLTAVMFILCVAQLGPSLVLIPAVIWLFWKDQTMWGSIMVVWAVVVGTMDNFIRPILIKKGADLPLLLIFAGVIGG
LIAFGVIGLFIGPVMLAVTYTLLVAWVMGPEPTEEAAAGSDFGTGHPQREDSAL

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=348, Percent_Identity=50.2873563218391, Blast_Score=324, Evalue=7e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39536; Mature: 39536

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPATPSADIARTTLAVLFIAILISASFWVLRPFLTALVWATMIVITTWPLMLSLQKCLW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKRALAVAAMSAALLLLLVIPLTLAIVSIVERSDDIVGWARSLAMYTPAPPPAWVEQVPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHCCCC
IGPKLAERWRTLATIDPVELSARLAPHVKAIVGWIVAQTGSVMMMVVQFLLTVIISAVLY
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ASGEKAAMGVRLFAHRLGGKSGEDASILAAKAIRGVALGVVVTALAQALLGGIGLALSGV
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAATLLTAVMFILCVAQLGPSLVLIPAVIWLFWKDQTMWGSIMVVWAVVVGTMDNFIRPI
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIKKGADLPLLLIFAGVIGGLIAFGVIGLFIGPVMLAVTYTLLVAWVMGPEPTEEAAAGS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
DFGTGHPQREDSAL
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKPATPSADIARTTLAVLFIAILISASFWVLRPFLTALVWATMIVITTWPLMLSLQKCLW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKRALAVAAMSAALLLLLVIPLTLAIVSIVERSDDIVGWARSLAMYTPAPPPAWVEQVPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHCCCC
IGPKLAERWRTLATIDPVELSARLAPHVKAIVGWIVAQTGSVMMMVVQFLLTVIISAVLY
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ASGEKAAMGVRLFAHRLGGKSGEDASILAAKAIRGVALGVVVTALAQALLGGIGLALSGV
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAATLLTAVMFILCVAQLGPSLVLIPAVIWLFWKDQTMWGSIMVVWAVVVGTMDNFIRPI
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIKKGADLPLLLIFAGVIGGLIAFGVIGLFIGPVMLAVTYTLLVAWVMGPEPTEEAAAGS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
DFGTGHPQREDSAL
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]