Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118578789
Identifier: 118578789
GI number: 118578789
Start: 348704
End: 349672
Strand: Direct
Name: 118578789
Synonym: Ppro_0347
Alternate gene names: NA
Gene position: 348704-349672 (Clockwise)
Preceding gene: 118578788
Following gene: 118578794
Centisome position: 8.7
GC content: 61.51
Gene sequence:
>969_bases ATGGCCATCATCTCCGCCAGCAGACGCAGCGACATACCGGCCTTCTTTGCCCACTGGTTTATGGAACGGGTGCGCCAGGG CTTCTTCCACCGGGTCAATCCCTTTAACGCCCATCAGGTCAAGGCGATAAGTCTCAGGCCGGAGGACGTGGACGCCATCG TGTTCTGGACCAAAAATCCCAAGCCGCTCTTCCCCTTTTTAGCTGAACTGGATGACCGGGGACTCAACTACTATGTCCAG TTCACCCTCAATCCCTATGAACGGTCCTTCGAGCCCAACCTTCCCTCTCTGTCCGAGCGGATCCATACCTTCCGCACCCT GAGCGAGATGATCGGTCCCCGGCGGCTGGTCTGGCGCTACGACCCGCTGATCCTCAGCAGCCGCACACCCCTGGAGTACC ACAGGGAAATGTTCGACCGTATGGCCACGGAGTTGCGTGGCGCAAGCCTACGGGTCATGTTCAGCTTCCTGGACTTCTAC GGCAAGGCCAGGGGCCGCCTCAGGGGCATCCAACGGGAGCAGGGGGTCGTAATCCAAGACGTCAGGGGGGAGGGGTTCGC GGCGGAGCGCTGGAGGTTGCTGGCGGATATGCGCGCAAGCGCGGAAGACAACGGCATGGAGCTCTGCTCCTGCGCGGAGG CGGAGGAGCTGGAGCGGATCGGTATCCGGCATGGCCACTGCATCGACGGAGGTCTGGTGCGGGAACTGTTCGGCAACCGG GGAAACTTTTCCAAGGACAAGTATCAGCGCAAGGAGTGCGGCTGCGTGGAGTCGGTGGACATGGGGGCCTACAACAGCTG CCCCTTTCAGTGCGTCTACTGCTATGCCAATGCCAGCCCGAAGGCGGTCGCCGCCAACCTGAAGAAGCACAATCCAACAG GATCGGCCCTGATCGGAGACTATCCGTTGGAGCGGTCAGCCGTCAGGCCCGTGAAGGAGACGGAGAGCGGCCAGCATCCC CTGTTCTGA
Upstream 100 bases:
>100_bases CTTCGAGGAGATGGACAACTGCCTCCAGGCGGTGCGCAACGCCCTGCGCAGGGGAGAGCGGATCGAGGGGGTATGAGGTA AGTGAGGAGGTAGGAGAGCC
Downstream 100 bases:
>100_bases GGGAAAGAGGGACGCAAAAAAGCCCGGAAGACGGATCTTCCGAGCTCTGCATGCCGTGTTAAAGCGGAGTGCTAGTTGGG GTAAACGGAAACCTTCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MAIISASRRSDIPAFFAHWFMERVRQGFFHRVNPFNAHQVKAISLRPEDVDAIVFWTKNPKPLFPFLAELDDRGLNYYVQ FTLNPYERSFEPNLPSLSERIHTFRTLSEMIGPRRLVWRYDPLILSSRTPLEYHREMFDRMATELRGASLRVMFSFLDFY GKARGRLRGIQREQGVVIQDVRGEGFAAERWRLLADMRASAEDNGMELCSCAEAEELERIGIRHGHCIDGGLVRELFGNR GNFSKDKYQRKECGCVESVDMGAYNSCPFQCVYCYANASPKAVAANLKKHNPTGSALIGDYPLERSAVRPVKETESGQHP LF
Sequences:
>Translated_322_residues MAIISASRRSDIPAFFAHWFMERVRQGFFHRVNPFNAHQVKAISLRPEDVDAIVFWTKNPKPLFPFLAELDDRGLNYYVQ FTLNPYERSFEPNLPSLSERIHTFRTLSEMIGPRRLVWRYDPLILSSRTPLEYHREMFDRMATELRGASLRVMFSFLDFY GKARGRLRGIQREQGVVIQDVRGEGFAAERWRLLADMRASAEDNGMELCSCAEAEELERIGIRHGHCIDGGLVRELFGNR GNFSKDKYQRKECGCVESVDMGAYNSCPFQCVYCYANASPKAVAANLKKHNPTGSALIGDYPLERSAVRPVKETESGQHP LF >Mature_321_residues AIISASRRSDIPAFFAHWFMERVRQGFFHRVNPFNAHQVKAISLRPEDVDAIVFWTKNPKPLFPFLAELDDRGLNYYVQF TLNPYERSFEPNLPSLSERIHTFRTLSEMIGPRRLVWRYDPLILSSRTPLEYHREMFDRMATELRGASLRVMFSFLDFYG KARGRLRGIQREQGVVIQDVRGEGFAAERWRLLADMRASAEDNGMELCSCAEAEELERIGIRHGHCIDGGLVRELFGNRG NFSKDKYQRKECGCVESVDMGAYNSCPFQCVYCYANASPKAVAANLKKHNPTGSALIGDYPLERSAVRPVKETESGQHPL F
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36957; Mature: 36825
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIISASRRSDIPAFFAHWFMERVRQGFFHRVNPFNAHQVKAISLRPEDVDAIVFWTKNP CCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEECCCC KPLFPFLAELDDRGLNYYVQFTLNPYERSFEPNLPSLSERIHTFRTLSEMIGPRRLVWRY CCHHHHHHHHCCCCCEEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE DPLILSSRTPLEYHREMFDRMATELRGASLRVMFSFLDFYGKARGRLRGIQREQGVVIQD CCEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEE VRGEGFAAERWRLLADMRASAEDNGMELCSCAEAEELERIGIRHGHCIDGGLVRELFGNR CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHCCC GNFSKDKYQRKECGCVESVDMGAYNSCPFQCVYCYANASPKAVAANLKKHNPTGSALIGD CCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCEEECC YPLERSAVRPVKETESGQHPLF CCCCHHHCCCHHHCCCCCCCCC >Mature Secondary Structure AIISASRRSDIPAFFAHWFMERVRQGFFHRVNPFNAHQVKAISLRPEDVDAIVFWTKNP CEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEECCCC KPLFPFLAELDDRGLNYYVQFTLNPYERSFEPNLPSLSERIHTFRTLSEMIGPRRLVWRY CCHHHHHHHHCCCCCEEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE DPLILSSRTPLEYHREMFDRMATELRGASLRVMFSFLDFYGKARGRLRGIQREQGVVIQD CCEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEE VRGEGFAAERWRLLADMRASAEDNGMELCSCAEAEELERIGIRHGHCIDGGLVRELFGNR CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHCCC GNFSKDKYQRKECGCVESVDMGAYNSCPFQCVYCYANASPKAVAANLKKHNPTGSALIGD CCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCEEECC YPLERSAVRPVKETESGQHPLF CCCCHHHCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA