Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118578786
Identifier: 118578786
GI number: 118578786
Start: 345721
End: 346974
Strand: Direct
Name: 118578786
Synonym: Ppro_0344
Alternate gene names: NA
Gene position: 345721-346974 (Clockwise)
Preceding gene: 118578785
Following gene: 118578787
Centisome position: 8.63
GC content: 62.76
Gene sequence:
>1254_bases ATGAACCCTGTGACCGTAACCATCACCGAGGAGCGCTCAATGCCCGATTCCCTGCTGGACCTGACCATCCATGACCTTGT GTCCCGCCATCCGGAGACAGTGCCGGTTTTAAGCTCCAACGGTCTCCACCTGTTTGTTGATCAGCAGGTGCGGGAAGTCT TTGGCCGGGCATTGACCCTGCGTACCGCCCTGCGGGCGGCTGGCATCAATGTGGAATCGTTTTGCAGGCTGCTGAATGAC GCCATCGCCGTCGAATCCCTGAACTCGGCCCATTCCCCTTCCCGTCCCCTGAATCTGTTCGCCCTGCTCCCCTGTCCTCT CAAGGTGCCGCTGGAGGAGGCCGTGAACGACTTCCTGGAGGAGCTTGGCCCCCAGGAGCGCGCCGGACTCACCTGCCGCA TCGAGGGGAACGCCAACAACCAGATCGAGTACGCCGACTACGCGGATCATTTCCAGAGCGTGGATGAGATTCCGGACATT GTCATCACCCCCGGCTTCAACAGCTTCTACCATCCCGGCTTTGTGCGGCGTTTCATCCAGAGCGGATGCTTCGCTGCTGT CAACCTCTCCTCCGGCGACCGGCATCTCTCCCCCCTGGGGGTGGTGGACCCGGACAGCCACTATTCCCTGCTGGCCATGA ACCTGCTGCTGCCGGTGGTGGACCATACCCGCCTGGGGAATCGCCCCCTCCCGCGGCGCTGGGAGGATCTGCTGGATCCG GTGTACGAGAAGAGCATCGCCATCCGGGGCAACCGGGTGGGGACCTTCTGCGAAACCCTGTTGCTCTCCCTGTTCAAGGA TTTCGGCCAGGAGGGGCTTAAGAGTCTGGGGCGCAATGTTGCCTGGGGATGGCACCCCTCCCAGATGGTCAAGGCCGCCG GCAGCGGTCAGCAGGAGACCCCAGCCATCAGCGTCATGCCGCTCTTCTTCGCCAACACCATCAAGAACCGCGACAGGGTC AGCGTGATCTGGCCCGAGGATGGCGCCCTGGTCAGTCCGGTCACCATGCTGGTCAAAAGCGAAAAGCGGGAGCAGTTGCG CCCCCTGATCGACTTCCTTATCGGCCCGCGGGTGGCCGCCATCTGCGCCGGAGCCTCCTTCCCCGCCCTGCACCCGGCGG TTGACAACCGGCTGCCAAAAGACGCCCGCTTCAAGTGGATCGGCTGGGAGTACGTCAAGAACAACGACCTCAAGAGTCTG ATCGCCGAGACCAATGCCATCTTCCTGGCCTCCTTCCGCGGGGAAGAGCGGTGA
Upstream 100 bases:
>100_bases CCACATCCCTGGGGTTAGGCAGCCCTGTGAACGATAACTAGCTGCAATAAGGTGATTGTTTGTGGCTGGTTGTTTTGGCA TGGGGTGAGCATGGAGGGTT
Downstream 100 bases:
>100_bases GGCTGGTCACCGTTGCCGGCCCGCCGTCGTCGGGCAAGACCGCTGTCACCATCAAGGCCCTGAGCTCGCTCATGCGGGAG GGGGCGAGGGTGGGGGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MNPVTVTITEERSMPDSLLDLTIHDLVSRHPETVPVLSSNGLHLFVDQQVREVFGRALTLRTALRAAGINVESFCRLLND AIAVESLNSAHSPSRPLNLFALLPCPLKVPLEEAVNDFLEELGPQERAGLTCRIEGNANNQIEYADYADHFQSVDEIPDI VITPGFNSFYHPGFVRRFIQSGCFAAVNLSSGDRHLSPLGVVDPDSHYSLLAMNLLLPVVDHTRLGNRPLPRRWEDLLDP VYEKSIAIRGNRVGTFCETLLLSLFKDFGQEGLKSLGRNVAWGWHPSQMVKAAGSGQQETPAISVMPLFFANTIKNRDRV SVIWPEDGALVSPVTMLVKSEKREQLRPLIDFLIGPRVAAICAGASFPALHPAVDNRLPKDARFKWIGWEYVKNNDLKSL IAETNAIFLASFRGEER
Sequences:
>Translated_417_residues MNPVTVTITEERSMPDSLLDLTIHDLVSRHPETVPVLSSNGLHLFVDQQVREVFGRALTLRTALRAAGINVESFCRLLND AIAVESLNSAHSPSRPLNLFALLPCPLKVPLEEAVNDFLEELGPQERAGLTCRIEGNANNQIEYADYADHFQSVDEIPDI VITPGFNSFYHPGFVRRFIQSGCFAAVNLSSGDRHLSPLGVVDPDSHYSLLAMNLLLPVVDHTRLGNRPLPRRWEDLLDP VYEKSIAIRGNRVGTFCETLLLSLFKDFGQEGLKSLGRNVAWGWHPSQMVKAAGSGQQETPAISVMPLFFANTIKNRDRV SVIWPEDGALVSPVTMLVKSEKREQLRPLIDFLIGPRVAAICAGASFPALHPAVDNRLPKDARFKWIGWEYVKNNDLKSL IAETNAIFLASFRGEER >Mature_417_residues MNPVTVTITEERSMPDSLLDLTIHDLVSRHPETVPVLSSNGLHLFVDQQVREVFGRALTLRTALRAAGINVESFCRLLND AIAVESLNSAHSPSRPLNLFALLPCPLKVPLEEAVNDFLEELGPQERAGLTCRIEGNANNQIEYADYADHFQSVDEIPDI VITPGFNSFYHPGFVRRFIQSGCFAAVNLSSGDRHLSPLGVVDPDSHYSLLAMNLLLPVVDHTRLGNRPLPRRWEDLLDP VYEKSIAIRGNRVGTFCETLLLSLFKDFGQEGLKSLGRNVAWGWHPSQMVKAAGSGQQETPAISVMPLFFANTIKNRDRV SVIWPEDGALVSPVTMLVKSEKREQLRPLIDFLIGPRVAAICAGASFPALHPAVDNRLPKDARFKWIGWEYVKNNDLKSL IAETNAIFLASFRGEER
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46349; Mature: 46349
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVTVTITEERSMPDSLLDLTIHDLVSRHPETVPVLSSNGLHLFVDQQVREVFGRALTL CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECHHHHHHHHHHHHH RTALRAAGINVESFCRLLNDAIAVESLNSAHSPSRPLNLFALLPCPLKVPLEEAVNDFLE HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH ELGPQERAGLTCRIEGNANNQIEYADYADHFQSVDEIPDIVITPGFNSFYHPGFVRRFIQ HCCCHHHCCEEEEEECCCCCCEEECHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHH SGCFAAVNLSSGDRHLSPLGVVDPDSHYSLLAMNLLLPVVDHTRLGNRPLPRRWEDLLDP CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH VYEKSIAIRGNRVGTFCETLLLSLFKDFGQEGLKSLGRNVAWGWHPSQMVKAAGSGQQET HHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCC PAISVMPLFFANTIKNRDRVSVIWPEDGALVSPVTMLVKSEKREQLRPLIDFLIGPRVAA CCEEEHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ICAGASFPALHPAVDNRLPKDARFKWIGWEYVKNNDLKSLIAETNAIFLASFRGEER HHCCCCCCCCCCHHHCCCCCCCCEEEECEEEECCCCHHHHHHCCCEEEEEECCCCCC >Mature Secondary Structure MNPVTVTITEERSMPDSLLDLTIHDLVSRHPETVPVLSSNGLHLFVDQQVREVFGRALTL CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECHHHHHHHHHHHHH RTALRAAGINVESFCRLLNDAIAVESLNSAHSPSRPLNLFALLPCPLKVPLEEAVNDFLE HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH ELGPQERAGLTCRIEGNANNQIEYADYADHFQSVDEIPDIVITPGFNSFYHPGFVRRFIQ HCCCHHHCCEEEEEECCCCCCEEECHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHH SGCFAAVNLSSGDRHLSPLGVVDPDSHYSLLAMNLLLPVVDHTRLGNRPLPRRWEDLLDP CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH VYEKSIAIRGNRVGTFCETLLLSLFKDFGQEGLKSLGRNVAWGWHPSQMVKAAGSGQQET HHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCC PAISVMPLFFANTIKNRDRVSVIWPEDGALVSPVTMLVKSEKREQLRPLIDFLIGPRVAA CCEEEHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ICAGASFPALHPAVDNRLPKDARFKWIGWEYVKNNDLKSLIAETNAIFLASFRGEER HHCCCCCCCCCCHHHCCCCCCCCEEEECEEEECCCCHHHHHHCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA