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The map label for this gene is yutI [H]

Identifier: 118578775

GI number: 118578775

Start: 335026

End: 335250

Strand: Direct

Name: yutI [H]

Synonym: Ppro_0333

Alternate gene names: 118578775

Gene position: 335026-335250 (Clockwise)

Preceding gene: 118578770

Following gene: 118578778

Centisome position: 8.36

GC content: 58.67

Gene sequence:

>225_bases
ATGAAAGAAGATGTATTGAGGGTTCTTGGGCAGGTGCGTCCCGCCCTGCAGGCGGATGGCGGAGATGTGGAGCTGGTTGA
AGTGACGGCGGACGGAATTGTCAAGGTGCGTCTGAAAGGCGCGTGCGGCAGCTGCCCCATGTCCACCATGACCCTCAAGA
TGGGGATCGAGCGTGCCATGAAGGAACAGATTCCCGCGGTGAAAGAGGTCGTTCAGGTTCCCTAG

Upstream 100 bases:

>100_bases
GGGGCTGCTCGGACGCCCCCCCGGTTGTGGAAATTGCGGTGCATGAAGCGATGGTGTGTGGCGCAGTGGTAGATCATAGA
CGATAAAGGAGAATGAGAGC

Downstream 100 bases:

>100_bases
TACGATGGTTCCGCATTGCGTACCCGAACCCCGCCAGCCCGGCGGGGTTTTTTTGTGCCCGCTACTCCAGAGCCAGCTGC
AGGCGGAGCGTCTTTTCCAC

Product: NifU domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MKEDVLRVLGQVRPALQADGGDVELVEVTADGIVKVRLKGACGSCPMSTMTLKMGIERAMKEQIPAVKEVVQVP

Sequences:

>Translated_74_residues
MKEDVLRVLGQVRPALQADGGDVELVEVTADGIVKVRLKGACGSCPMSTMTLKMGIERAMKEQIPAVKEVVQVP
>Mature_74_residues
MKEDVLRVLGQVRPALQADGGDVELVEVTADGIVKVRLKGACGSCPMSTMTLKMGIERAMKEQIPAVKEVVQVP

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17541876, Length=63, Percent_Identity=46.031746031746, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 7922; Mature: 7922

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEDVLRVLGQVRPALQADGGDVELVEVTADGIVKVRLKGACGSCPMSTMTLKMGIERAM
CCHHHHHHHHHHCHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
KEQIPAVKEVVQVP
HHHCHHHHHHHCCC
>Mature Secondary Structure
MKEDVLRVLGQVRPALQADGGDVELVEVTADGIVKVRLKGACGSCPMSTMTLKMGIERAM
CCHHHHHHHHHHCHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
KEQIPAVKEVVQVP
HHHCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]