Click here to switch to the map view.

The map label for this gene is ycdJ [C]

Identifier: 118478470

GI number: 118478470

Start: 3010269

End: 3011153

Strand: Reverse

Name: ycdJ [C]

Synonym: BALH_2842

Alternate gene names: 118478470

Gene position: 3011153-3010269 (Counterclockwise)

Preceding gene: 118478471

Following gene: 118478469

Centisome position: 57.28

GC content: 35.03

Gene sequence:

>885_bases
ATGAATCACTTTTTTGTAGAATTTGGTGAATACCAAGCAAGTGTTTGTGAATGGGGGGATAAAAGTAACCCTCAAATCAT
TTGTTTTCATGGTTTAGGAAGTACAAAGTTAAGTTTTATAGAAATGGCGGAATTTCTAAAAGATAAATATCATGTTGTAT
CGTTTGATCTACCTGGACATGGGAAAACACCAAATTTTGAGAAGGATGAAGATTACGGTGCATCTCATTTAACAAATTGG
GTAGTAGCATTACTTGAGCACATAGGAAAAGAAACATTTCATATAGTAGCACATTCATGGGGCGCAAGCGTTGCGCTTCA
CTATGCAGCCGAGCGTCCAGAAAAAGTGAATAAAATGGTTTTATTAGATGGTGGTTATCATCATGGCAAAATGAATGCGG
ACTATTTTGCGCAGCTATATAAACATGCGAAAGAAGGAGATTGTCCACCGCGATCATTAGAAGAAGAAATTACTCATTAC
GAAAACGACTTTGATGAATACGTTTTTGATAGTAAAGAAGCGTTCATCCAATCAGAAAAACGGGCTTACAGCAGGTGGTC
ACCATTAATAGAACGTGCAGTTTATGACTTAATGCGAGAAGAAGATAGTAAAGTGAAATGGCACGCTACTGGTGATACCG
CTAGAGGTGTAATTAAGTTTCAATATACGGTGTATAAAACATTGAAATCGCATAAAATTAAAAGCGATATTTTATTATTG
TATTGCGATCTTCCACATAACTATTTAAAAATAAGAGAATTGCAGATTGCGGAATTTAAGAAGCATATTGATATTACGAC
TAAGTTTTACAAAGATACAGGACATTTAATGCATTGGGATAGACCAGAAGAGATTGCTGAAGATGTTTTAAAATGGTTCA
TATAA

Upstream 100 bases:

>100_bases
ACGAAAAATGAATTTGGATAATTTTGTTGAATTTATTTATTGTAAAAAAGCAATTTTGCATTCAAACTAATTTATATCTA
ACAATTAGAGGAGATTAAAA

Downstream 100 bases:

>100_bases
AGAAAGTCCGTTGTTCGAATTTGAGCACCGGACTTTCTTTTGAAAAACTGAATTCAAGAGTGATAGAAGGATAAGCAAAA
GCATTACAGTTCTATCACCA

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold Protein; Lipase; Hydrolase Alpha; Alpha/Beta Superfamily Hydrolase/Acyltransferase

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MNHFFVEFGEYQASVCEWGDKSNPQIICFHGLGSTKLSFIEMAEFLKDKYHVVSFDLPGHGKTPNFEKDEDYGASHLTNW
VVALLEHIGKETFHIVAHSWGASVALHYAAERPEKVNKMVLLDGGYHHGKMNADYFAQLYKHAKEGDCPPRSLEEEITHY
ENDFDEYVFDSKEAFIQSEKRAYSRWSPLIERAVYDLMREEDSKVKWHATGDTARGVIKFQYTVYKTLKSHKIKSDILLL
YCDLPHNYLKIRELQIAEFKKHIDITTKFYKDTGHLMHWDRPEEIAEDVLKWFI

Sequences:

>Translated_294_residues
MNHFFVEFGEYQASVCEWGDKSNPQIICFHGLGSTKLSFIEMAEFLKDKYHVVSFDLPGHGKTPNFEKDEDYGASHLTNW
VVALLEHIGKETFHIVAHSWGASVALHYAAERPEKVNKMVLLDGGYHHGKMNADYFAQLYKHAKEGDCPPRSLEEEITHY
ENDFDEYVFDSKEAFIQSEKRAYSRWSPLIERAVYDLMREEDSKVKWHATGDTARGVIKFQYTVYKTLKSHKIKSDILLL
YCDLPHNYLKIRELQIAEFKKHIDITTKFYKDTGHLMHWDRPEEIAEDVLKWFI
>Mature_294_residues
MNHFFVEFGEYQASVCEWGDKSNPQIICFHGLGSTKLSFIEMAEFLKDKYHVVSFDLPGHGKTPNFEKDEDYGASHLTNW
VVALLEHIGKETFHIVAHSWGASVALHYAAERPEKVNKMVLLDGGYHHGKMNADYFAQLYKHAKEGDCPPRSLEEEITHY
ENDFDEYVFDSKEAFIQSEKRAYSRWSPLIERAVYDLMREEDSKVKWHATGDTARGVIKFQYTVYKTLKSHKIKSDILLL
YCDLPHNYLKIRELQIAEFKKHIDITTKFYKDTGHLMHWDRPEEIAEDVLKWFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34432; Mature: 34432

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHFFVEFGEYQASVCEWGDKSNPQIICFHGLGSTKLSFIEMAEFLKDKYHVVSFDLPGH
CCCEEEECCCHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCC
GKTPNFEKDEDYGASHLTNWVVALLEHIGKETFHIVAHSWGASVALHYAAERPEKVNKMV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCCEEEEHHHCCCHHCCEEE
LLDGGYHHGKMNADYFAQLYKHAKEGDCPPRSLEEEITHYENDFDEYVFDSKEAFIQSEK
EEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHH
RAYSRWSPLIERAVYDLMREEDSKVKWHATGDTARGVIKFQYTVYKTLKSHKIKSDILLL
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCCCCCEEEE
YCDLPHNYLKIRELQIAEFKKHIDITTKFYKDTGHLMHWDRPEEIAEDVLKWFI
EECCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNHFFVEFGEYQASVCEWGDKSNPQIICFHGLGSTKLSFIEMAEFLKDKYHVVSFDLPGH
CCCEEEECCCHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCC
GKTPNFEKDEDYGASHLTNWVVALLEHIGKETFHIVAHSWGASVALHYAAERPEKVNKMV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCCEEEEHHHCCCHHCCEEE
LLDGGYHHGKMNADYFAQLYKHAKEGDCPPRSLEEEITHYENDFDEYVFDSKEAFIQSEK
EEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHH
RAYSRWSPLIERAVYDLMREEDSKVKWHATGDTARGVIKFQYTVYKTLKSHKIKSDILLL
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCCCCCEEEE
YCDLPHNYLKIRELQIAEFKKHIDITTKFYKDTGHLMHWDRPEEIAEDVLKWFI
EECCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA