| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is pulA [H]
Identifier: 118478096
GI number: 118478096
Start: 2616053
End: 2618620
Strand: Reverse
Name: pulA [H]
Synonym: BALH_2451
Alternate gene names: 118478096
Gene position: 2618620-2616053 (Counterclockwise)
Preceding gene: 118478097
Following gene: 118478095
Centisome position: 49.81
GC content: 34.46
Gene sequence:
>2568_bases GTGTATGTGGTGCAAATTACAAAAAGATTAATTAACAAAACAGTTTTATTACTTACTTTAATCGTTATGTTATCATCGAT TTTCTCCTTTCAGAATGTGAAGGCAGTTTCAAATTCGAAAACAACTGAAGTCATCATTCATTACAAAGAGCAGTCTGGAA ATACAAAAGACTGGAACCTTTGGATATGGGGAGAAAATTCAAGTGGAAAATCATATGAATTTACTGGTGAAGATGAATTT GGAAAGTACGCAAAGATTAATATAGATGGTGATTATAACCGTTTAGGATTTATCATTCGTACAAATGAGTGGGAAAAAGA TGGTGGGGATCGTTGGATTGAAAATATAAAAGACGGTCGTGCTGAAGTATGGATTCTTTCGGGTGATGAAAAAGTGTATA ATTCTAAGCCGTCATCGGATCTCTCAATTCAAAAAGCAACTATTGATAGTTTCCATGAAATTACTGTAACGACGAATGTC CCGTTTAATATTAAGGAAAAGAAAATTGAAATGGAAGGCATTAAAATTAAGAGTATTAGTCCTTATGATATAAACAGTGG AGATATTACGAATAAGGTTAAAATAATTACGGAACAGAAAATTGATTTAAAACAAACATACAAAGTTAAAATAGAAAACT TAGCTGATACGAATACTGAAATCGGTAAAGTAATTCGTACTGAGGAGTTTGATAAATTATTTTATTACGGTGGCAACGAT TTAGGTAATATATATACACCACAACATACAAAATTCCGTGTATGGGCCCCTACTGCGAGTGAAGCGAAGTTAGTTACATA TAAAAAATGGAACGATAAAATAGGTACTGAAATAAATATGCAACAAGGTGAAAAGGGCACCTGGAAAGCAGAACTTAAAG GAAATCAAAAAGGTCTCTATTATACGTATAAGGTGAAAATTGGTGATAAGTGGACAGAAGCCGTTGATCCGTATGCACGT GCTGCTTCTGTAAATGGAGATAAAGGTGCGGTTGTTGATTTAGAAGAAACAAATCCGAAAAGATGGAACACTAACAAAAA GCCTAAATTAAAAAATCCGGAAGATGCTATTATTTATGAATTGCATGTACGCGATCTTTCCATCCAACCTGAAAGTGGGA TTAAGCAGAAAGGGAAATATTTAGGAGTAATAGAAAAAGGAACAAAAGGGCCTGAAGGTGTGAAAACGGGACTTGATCAT ATGAAAGATCTTGGTGTTACACACGTTCAGCTTTTACCAATATTTGATTATGCTTCAGTAAATGAAGAGAAGGTAAACGA ACCGCAATATAACTGGGGATATGACCCAAAAAACTTTAACGTTCCAGAGGGATCCTATTCTACAAATCCATATGAGCCAA CTGTTCGAATAACTGAATTAAAACAAATGATTCAAACACTACATGATAATAATCTTCGAGTGGTGATGGATGTAGTATAT AACCATATGTATAACGCTGTTGAATCTAATTTCCATAAGTTGGTTCCAGGTTATTATTATCGTTACAATGAAGATGGAAC ATTTGCAAATGGAACTGGAGTAGGAAATGATACGGCTTCAGAAAGAAAAATGATGAGGAAATTTATGATAGATTCCGTCA CATATTGGGCAAAAGAATACAATTTAGATGGATTCCGTTTTGATTTAATGGGTATTCATGATTATGAAACGATGAATGAA ATACGTAAAGCTGTTAATCAAATTGACCCTTCTATTATACTGCATGGAGAAGGTTGGGATTTAAATACACCCCTTGCAGC TGAGTTGAAAGCAAATCAAAAAAATGCGGAGAAAATGAAAGGAATTGCCCATTTTAACGATAATATACGTGATGGATTGA AAGGTAGTGTGTTTGAAGAGAAAGAAAATGGATTTGTAAATGGAAAGGAAAACATGGAAGACCGTATTAAAAAAGGCATT ACAGCAGGCATTGACTACGATACAAATTCGTCGACTTATCTAGATCCAGAGCAGGTATTAACTTATGTGGAAGCGCATGA TAATCATACATTATGGGATAAACTTGAGTTGACTAATCCAGGTGACAGTGAAGAAGCGCGAAAACAAATGCATAAATTAT CTTCTTCGATTTTATTAACATCACAAGGTATTCCGTTTTTACATGCAGGACAAGAGTTTATGCGCACGAAATATGGTGAT CATAACAGTTATAAATCTCCAGATTCAATTAACCAGATGGACTGGTTGCGCCGTGCTGCGTTTAATAATGAAGTAGATTA TATGAAGGGCTTAATAGAATTACGCAAAAAGTACCCAGCTTTTCGAATGACATCTGCAGAGCAAATAAAAACACACGTAT CATTTATTGATGCTCCGAAAAATACTGTAGCTTATACAATAGAGGGGAATAAAAATGAATACTTTACGGTGGCTCACAAT GCAAATAAAGAAGCTGTTGAAATAACACTTCCATCGAAAGGTCCTTGGAAAGTACTAGTAGACGGGAAGCAGGCGGGAAG TAAACCACTTTATGTTGTCCATGACAATAAAATTAAAGTTCCTGCATTAAGTTCATTTGTTTTAAAAACAGAGAAACCGA TTAAATAA
Upstream 100 bases:
>100_bases ATAGCCAATATGGAGGTGAAGTAAAAGAGATTTCTAGATTAATTTAAGCAGTGTTATTCAGTGAAAGCATAATAAATCGT TCGTACTATTTAAAGAAAGG
Downstream 100 bases:
>100_bases ATGCTAAAAGCGGAGTGAAGAAGGTTGTTTTCACTTTGCTTTTAAAGTTAAAATAGTATAATTTCACATACTGTAATTAT ATTACAATTTAATAAAAAAA
Product: pullulanase
Products: NA
Alternate protein names: Alpha-dextrin endo-1,6-alpha-glucosidase; Pullulan 6-glucanohydrolase [H]
Number of amino acids: Translated: 855; Mature: 855
Protein sequence:
>855_residues MYVVQITKRLINKTVLLLTLIVMLSSIFSFQNVKAVSNSKTTEVIIHYKEQSGNTKDWNLWIWGENSSGKSYEFTGEDEF GKYAKINIDGDYNRLGFIIRTNEWEKDGGDRWIENIKDGRAEVWILSGDEKVYNSKPSSDLSIQKATIDSFHEITVTTNV PFNIKEKKIEMEGIKIKSISPYDINSGDITNKVKIITEQKIDLKQTYKVKIENLADTNTEIGKVIRTEEFDKLFYYGGND LGNIYTPQHTKFRVWAPTASEAKLVTYKKWNDKIGTEINMQQGEKGTWKAELKGNQKGLYYTYKVKIGDKWTEAVDPYAR AASVNGDKGAVVDLEETNPKRWNTNKKPKLKNPEDAIIYELHVRDLSIQPESGIKQKGKYLGVIEKGTKGPEGVKTGLDH MKDLGVTHVQLLPIFDYASVNEEKVNEPQYNWGYDPKNFNVPEGSYSTNPYEPTVRITELKQMIQTLHDNNLRVVMDVVY NHMYNAVESNFHKLVPGYYYRYNEDGTFANGTGVGNDTASERKMMRKFMIDSVTYWAKEYNLDGFRFDLMGIHDYETMNE IRKAVNQIDPSIILHGEGWDLNTPLAAELKANQKNAEKMKGIAHFNDNIRDGLKGSVFEEKENGFVNGKENMEDRIKKGI TAGIDYDTNSSTYLDPEQVLTYVEAHDNHTLWDKLELTNPGDSEEARKQMHKLSSSILLTSQGIPFLHAGQEFMRTKYGD HNSYKSPDSINQMDWLRRAAFNNEVDYMKGLIELRKKYPAFRMTSAEQIKTHVSFIDAPKNTVAYTIEGNKNEYFTVAHN ANKEAVEITLPSKGPWKVLVDGKQAGSKPLYVVHDNKIKVPALSSFVLKTEKPIK
Sequences:
>Translated_855_residues MYVVQITKRLINKTVLLLTLIVMLSSIFSFQNVKAVSNSKTTEVIIHYKEQSGNTKDWNLWIWGENSSGKSYEFTGEDEF GKYAKINIDGDYNRLGFIIRTNEWEKDGGDRWIENIKDGRAEVWILSGDEKVYNSKPSSDLSIQKATIDSFHEITVTTNV PFNIKEKKIEMEGIKIKSISPYDINSGDITNKVKIITEQKIDLKQTYKVKIENLADTNTEIGKVIRTEEFDKLFYYGGND LGNIYTPQHTKFRVWAPTASEAKLVTYKKWNDKIGTEINMQQGEKGTWKAELKGNQKGLYYTYKVKIGDKWTEAVDPYAR AASVNGDKGAVVDLEETNPKRWNTNKKPKLKNPEDAIIYELHVRDLSIQPESGIKQKGKYLGVIEKGTKGPEGVKTGLDH MKDLGVTHVQLLPIFDYASVNEEKVNEPQYNWGYDPKNFNVPEGSYSTNPYEPTVRITELKQMIQTLHDNNLRVVMDVVY NHMYNAVESNFHKLVPGYYYRYNEDGTFANGTGVGNDTASERKMMRKFMIDSVTYWAKEYNLDGFRFDLMGIHDYETMNE IRKAVNQIDPSIILHGEGWDLNTPLAAELKANQKNAEKMKGIAHFNDNIRDGLKGSVFEEKENGFVNGKENMEDRIKKGI TAGIDYDTNSSTYLDPEQVLTYVEAHDNHTLWDKLELTNPGDSEEARKQMHKLSSSILLTSQGIPFLHAGQEFMRTKYGD HNSYKSPDSINQMDWLRRAAFNNEVDYMKGLIELRKKYPAFRMTSAEQIKTHVSFIDAPKNTVAYTIEGNKNEYFTVAHN ANKEAVEITLPSKGPWKVLVDGKQAGSKPLYVVHDNKIKVPALSSFVLKTEKPIK >Mature_855_residues MYVVQITKRLINKTVLLLTLIVMLSSIFSFQNVKAVSNSKTTEVIIHYKEQSGNTKDWNLWIWGENSSGKSYEFTGEDEF GKYAKINIDGDYNRLGFIIRTNEWEKDGGDRWIENIKDGRAEVWILSGDEKVYNSKPSSDLSIQKATIDSFHEITVTTNV PFNIKEKKIEMEGIKIKSISPYDINSGDITNKVKIITEQKIDLKQTYKVKIENLADTNTEIGKVIRTEEFDKLFYYGGND LGNIYTPQHTKFRVWAPTASEAKLVTYKKWNDKIGTEINMQQGEKGTWKAELKGNQKGLYYTYKVKIGDKWTEAVDPYAR AASVNGDKGAVVDLEETNPKRWNTNKKPKLKNPEDAIIYELHVRDLSIQPESGIKQKGKYLGVIEKGTKGPEGVKTGLDH MKDLGVTHVQLLPIFDYASVNEEKVNEPQYNWGYDPKNFNVPEGSYSTNPYEPTVRITELKQMIQTLHDNNLRVVMDVVY NHMYNAVESNFHKLVPGYYYRYNEDGTFANGTGVGNDTASERKMMRKFMIDSVTYWAKEYNLDGFRFDLMGIHDYETMNE IRKAVNQIDPSIILHGEGWDLNTPLAAELKANQKNAEKMKGIAHFNDNIRDGLKGSVFEEKENGFVNGKENMEDRIKKGI TAGIDYDTNSSTYLDPEQVLTYVEAHDNHTLWDKLELTNPGDSEEARKQMHKLSSSILLTSQGIPFLHAGQEFMRTKYGD HNSYKSPDSINQMDWLRRAAFNNEVDYMKGLIELRKKYPAFRMTSAEQIKTHVSFIDAPKNTVAYTIEGNKNEYFTVAHN ANKEAVEITLPSKGPWKVLVDGKQAGSKPLYVVHDNKIKVPALSSFVLKTEKPIK
Specific function: Hydrolyzes The Alpha-1,6-Glucosidic Linkages In Glycogen Which Has First Been Partially Depolymerized By Phosphorylase. Shows Only Very Little Activity With Native Glycogen. [C]
COG id: COG1523
COG function: function code G; Type II secretory pathway, pullulanase PulA and related glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Escherichia coli, GI2367229, Length=663, Percent_Identity=22.7752639517345, Blast_Score=119, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR004193 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR005323 - InterPro: IPR011840 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF02922 CBM_48; PF03714 PUD [H]
EC number: =3.2.1.41 [H]
Molecular weight: Translated: 97668; Mature: 97668
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVVQITKRLINKTVLLLTLIVMLSSIFSFQNVKAVSNSKTTEVIIHYKEQSGNTKDWNL CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHCCCCCEEEEEEEECCCCCCCCEEE WIWGENSSGKSYEFTGEDEFGKYAKINIDGDYNRLGFIIRTNEWEKDGGDRWIENIKDGR EEEECCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHCCCC AEVWILSGDEKVYNSKPSSDLSIQKATIDSFHEITVTTNVPFNIKEKKIEMEGIKIKSIS EEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCHHCEEEECCEEEECCC PYDINSGDITNKVKIITEQKIDLKQTYKVKIENLADTNTEIGKVIRTEEFDKLFYYGGND CCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCC LGNIYTPQHTKFRVWAPTASEAKLVTYKKWNDKIGTEINMQQGEKGTWKAELKGNQKGLY CCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEECCCCCCCCEEEEECCCCCCEE YTYKVKIGDKWTEAVDPYARAASVNGDKGAVVDLEETNPKRWNTNKKPKLKNPEDAIIYE EEEEEEECCCHHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE LHVRDLSIQPESGIKQKGKYLGVIEKGTKGPEGVKTGLDHMKDLGVTHVQLLPIFDYASV EEEEEEEECCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCC NEEKVNEPQYNWGYDPKNFNVPEGSYSTNPYEPTVRITELKQMIQTLHDNNLRVVMDVVY CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEHHHHHH NHMYNAVESNFHKLVPGYYYRYNEDGTFANGTGVGNDTASERKMMRKFMIDSVTYWAKEY HHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC NLDGFRFDLMGIHDYETMNEIRKAVNQIDPSIILHGEGWDLNTPLAAELKANQKNAEKMK CCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHEECCCCCHHHHHH GIAHFNDNIRDGLKGSVFEEKENGFVNGKENMEDRIKKGITAGIDYDTNSSTYLDPEQVL HHHHCCCCHHCCCCCCCEECCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCHHHHH TYVEAHDNHTLWDKLELTNPGDSEEARKQMHKLSSSILLTSQGIPFLHAGQEFMRTKYGD HHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCEECCHHHHHHHCCC HNSYKSPDSINQMDWLRRAAFNNEVDYMKGLIELRKKYPAFRMTSAEQIKTHVSFIDAPK CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHEEECCC NTVAYTIEGNKNEYFTVAHNANKEAVEITLPSKGPWKVLVDGKQAGSKPLYVVHDNKIKV CEEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEECCEECC PALSSFVLKTEKPIK CCHHHHHCCCCCCCC >Mature Secondary Structure MYVVQITKRLINKTVLLLTLIVMLSSIFSFQNVKAVSNSKTTEVIIHYKEQSGNTKDWNL CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHCCCCCEEEEEEEECCCCCCCCEEE WIWGENSSGKSYEFTGEDEFGKYAKINIDGDYNRLGFIIRTNEWEKDGGDRWIENIKDGR EEEECCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHCCCC AEVWILSGDEKVYNSKPSSDLSIQKATIDSFHEITVTTNVPFNIKEKKIEMEGIKIKSIS EEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCHHCEEEECCEEEECCC PYDINSGDITNKVKIITEQKIDLKQTYKVKIENLADTNTEIGKVIRTEEFDKLFYYGGND CCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCC LGNIYTPQHTKFRVWAPTASEAKLVTYKKWNDKIGTEINMQQGEKGTWKAELKGNQKGLY CCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEECCCCCCCCEEEEECCCCCCEE YTYKVKIGDKWTEAVDPYARAASVNGDKGAVVDLEETNPKRWNTNKKPKLKNPEDAIIYE EEEEEEECCCHHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE LHVRDLSIQPESGIKQKGKYLGVIEKGTKGPEGVKTGLDHMKDLGVTHVQLLPIFDYASV EEEEEEEECCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCC NEEKVNEPQYNWGYDPKNFNVPEGSYSTNPYEPTVRITELKQMIQTLHDNNLRVVMDVVY CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEHHHHHH NHMYNAVESNFHKLVPGYYYRYNEDGTFANGTGVGNDTASERKMMRKFMIDSVTYWAKEY HHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC NLDGFRFDLMGIHDYETMNEIRKAVNQIDPSIILHGEGWDLNTPLAAELKANQKNAEKMK CCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHEECCCCCHHHHHH GIAHFNDNIRDGLKGSVFEEKENGFVNGKENMEDRIKKGITAGIDYDTNSSTYLDPEQVL HHHHCCCCHHCCCCCCCEECCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCHHHHH TYVEAHDNHTLWDKLELTNPGDSEEARKQMHKLSSSILLTSQGIPFLHAGQEFMRTKYGD HHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCEECCHHHHHHHCCC HNSYKSPDSINQMDWLRRAAFNNEVDYMKGLIELRKKYPAFRMTSAEQIKTHVSFIDAPK CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHEEECCC NTVAYTIEGNKNEYFTVAHNANKEAVEITLPSKGPWKVLVDGKQAGSKPLYVVHDNKIKV CEEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEECCEECC PALSSFVLKTEKPIK CCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9453151; 10360571 [H]