Click here to switch to the map view.

The map label for this gene is ykuC [H]

Identifier: 118478014

GI number: 118478014

Start: 2536519

End: 2537850

Strand: Direct

Name: ykuC [H]

Synonym: BALH_2365

Alternate gene names: 118478014

Gene position: 2536519-2537850 (Clockwise)

Preceding gene: 118478013

Following gene: 118478015

Centisome position: 48.25

GC content: 34.91

Gene sequence:

>1332_bases
ATGATTTGTGCTGCCTCCTGTTCAGAACATGAAATAGGGGGCTTTTTTATGTCGACAAATGTAGAAACGAAACAAAATAC
TGGGGTATCACAAGTGTTGAAAAATCGGTTTGTGCAAGGTATTTTAGCATCAGCATTATTTTTACAAGTAGGGATATGGG
TTCGAAACTTTGCGGTATTATTATATGTAATGGAAATGACAAAAGGTGATGCTTTTGCTATCTCGATGATTTCAGTTGCG
GAGTTTGCTCCAATTTTCATCTTCTCCTTTATTGGTGGAACGTTTGCTGATAGGTGGAAGCCGAAAAAGACAATGATATG
GTGTGAAACGTTAAGTGCTATTTCAGTATTTGCTGTATTAATTACTCTAATGTTCGGAACGTGGAAAATCGTATTTTTTG
TAACGCTTATTTCTGCAATCCTTTCTCAGTTTTCTCAACCATCTGGAATGAAATTATTTAAACAGCATTTATCGGCAGAA
CAAATCCAATTAGCAATGTCTATTTATCAAACAATATTTGCGATATTTATGGTGTTAGGACCGATTCTTGGAACATTTAT
TTTTCATAGTTTTGGAATTTATATTTCAATTATTATTACAGGTATCGCTTTTTTACTTGCAGCAGCGGTGTTGTTATTTC
TTCCGAAAGATCTTGAGAATGATAATGAGAAGAAAGAAATCACTCTGTTACAGGAAATGCTTGATGGTATTAAGTATGTC
AAAAAGAAAAAAGCATTAACTTTGCTAGGGCTTTGTTTTATGGCAGCAGGACTAGGTATAGGTTTAATTCAGCCATTAGG
CATATTTATCGTAACTGAGCAGTTAGGGCTGTCAAAAGAGAGTTTACAATGGTTACTAACAGTAAATGGTGCAGGAATGA
TTGTTGGCGGTGCTTTAGCGATGGTATTTGCAAAAAACGTTGCGCCGCAAAAGATGTTAATTATCGGTATGCTCGGTCAG
GCGATTGGCATTGGTATTATAGGTTATTCGACAAATTTATGGATAACACTCACAGCACAACTTTTTAGTGGGTTAGCTCT
TCCCTGTATCCAAATAGGTATTAATACGCTCATTATTCAAAATAGCGATACAGATTTTATTGGTCGTGTAAATGGCATTT
TAAGTCCACTATTCACCGGTTCAATGGTAGTAACGATGAGTATTGCTGGTTCATTAAAGGAGATGTTTTCATTAAGTATG
ATGTATGAAGGAACGGCTTTCCTATTTATAATTGGTTTATTGTTTATTTTACCTATATACAATTTAAAGCCAACGATAGC
AATAGAAAGTGAAATAAGTGGTAAAGGAAGTGCTATACAAAATGAATCCTAA

Upstream 100 bases:

>100_bases
GATCTTCGTTAAAAAACGAAATATTCTTCTGAATAGGATTAGTCTGTACATTTATAGAAAAGGGATGTATTTCGCTCTGC
GAAAAATATAGTCTTTTCAT

Downstream 100 bases:

>100_bases
TCCAAATGTTAAATACCCTATTGAAGGAAATCAAAACGTCCATTTTATAAAAAATACAATAACAAAAGCTAATATACTCG
TTGGAGACTATTCATATTAT

Product: macrolide efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MICAASCSEHEIGGFFMSTNVETKQNTGVSQVLKNRFVQGILASALFLQVGIWVRNFAVLLYVMEMTKGDAFAISMISVA
EFAPIFIFSFIGGTFADRWKPKKTMIWCETLSAISVFAVLITLMFGTWKIVFFVTLISAILSQFSQPSGMKLFKQHLSAE
QIQLAMSIYQTIFAIFMVLGPILGTFIFHSFGIYISIIITGIAFLLAAAVLLFLPKDLENDNEKKEITLLQEMLDGIKYV
KKKKALTLLGLCFMAAGLGIGLIQPLGIFIVTEQLGLSKESLQWLLTVNGAGMIVGGALAMVFAKNVAPQKMLIIGMLGQ
AIGIGIIGYSTNLWITLTAQLFSGLALPCIQIGINTLIIQNSDTDFIGRVNGILSPLFTGSMVVTMSIAGSLKEMFSLSM
MYEGTAFLFIIGLLFILPIYNLKPTIAIESEISGKGSAIQNES

Sequences:

>Translated_443_residues
MICAASCSEHEIGGFFMSTNVETKQNTGVSQVLKNRFVQGILASALFLQVGIWVRNFAVLLYVMEMTKGDAFAISMISVA
EFAPIFIFSFIGGTFADRWKPKKTMIWCETLSAISVFAVLITLMFGTWKIVFFVTLISAILSQFSQPSGMKLFKQHLSAE
QIQLAMSIYQTIFAIFMVLGPILGTFIFHSFGIYISIIITGIAFLLAAAVLLFLPKDLENDNEKKEITLLQEMLDGIKYV
KKKKALTLLGLCFMAAGLGIGLIQPLGIFIVTEQLGLSKESLQWLLTVNGAGMIVGGALAMVFAKNVAPQKMLIIGMLGQ
AIGIGIIGYSTNLWITLTAQLFSGLALPCIQIGINTLIIQNSDTDFIGRVNGILSPLFTGSMVVTMSIAGSLKEMFSLSM
MYEGTAFLFIIGLLFILPIYNLKPTIAIESEISGKGSAIQNES
>Mature_443_residues
MICAASCSEHEIGGFFMSTNVETKQNTGVSQVLKNRFVQGILASALFLQVGIWVRNFAVLLYVMEMTKGDAFAISMISVA
EFAPIFIFSFIGGTFADRWKPKKTMIWCETLSAISVFAVLITLMFGTWKIVFFVTLISAILSQFSQPSGMKLFKQHLSAE
QIQLAMSIYQTIFAIFMVLGPILGTFIFHSFGIYISIIITGIAFLLAAAVLLFLPKDLENDNEKKEITLLQEMLDGIKYV
KKKKALTLLGLCFMAAGLGIGLIQPLGIFIVTEQLGLSKESLQWLLTVNGAGMIVGGALAMVFAKNVAPQKMLIIGMLGQ
AIGIGIIGYSTNLWITLTAQLFSGLALPCIQIGINTLIIQNSDTDFIGRVNGILSPLFTGSMVVTMSIAGSLKEMFSLSM
MYEGTAFLFIIGLLFILPIYNLKPTIAIESEISGKGSAIQNES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004751
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48220; Mature: 48220

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]