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The map label for this gene is hom [H]

Identifier: 118478000

GI number: 118478000

Start: 2518362

End: 2519432

Strand: Direct

Name: hom [H]

Synonym: BALH_2348

Alternate gene names: 118478000

Gene position: 2518362-2519432 (Clockwise)

Preceding gene: 118477999

Following gene: 118478001

Centisome position: 47.9

GC content: 32.77

Gene sequence:

>1071_bases
TTGGATAGAAAAATATGGGGGGATATTATGAAAATTAAAGTTGTATTATCAGGATATGGAACAGTAGGAAAAGAGTTTAT
AAAATTATTAAACAAAAAATATTTATATATAAATAAGACGTATGGAATAGATTTAGTGGTAAGCGGTGTATTAGGCAGAA
ATGTTGCAATACATAATGAAGATGGATTATCTATTCATCATTTATTAAGATATGGTGGCGGTAGCTGTGCAATTGAAAAA
TATATTGAACATCATCCAGAGGAACGTGCAACAGATAACATAAGTGGTACAGTGCTGGTAGAATCAACAGTTACAAACCT
TAAAGATGGAAATCCAGGGAAACAATATATAAAACAAGCGATTGAGAAAAAAATGGATATAGTAGCAATTTCAAAAGGTG
CGCTAGTTACAAACTGGAGAGAAATAAATGAAGCTGCAAAAATCGCAAATGTACGAATTCGATACAGTGGGGCAACTGCT
GCGGCATTACCAACACTTGATATTGGTCAATTTAGTTTAGCTGGTTGCCATATTGAAAAAATAGAAGGAATATTAAACGG
GACAACAAATTATATTCTTTCGAAAATGAATGAGGAAGATATTACATTTGAAGAAGCACTGAAAGAAGCGCAAAGTAAAG
GAATTGCTGAAACGAACCCAATATTAGATGTAAGTGGTTCTGATAGTGCGTGTAAATTGTTACTTTTGACAAACAGTTTA
ATGGGAACAGAGAATAAGCTTACAGATATACATATTAAAGGAATCGAACATGTTACAAAACAACAAATTCGAAATGCGAA
GGAACAAAATAAAATTATTAAATTGATAGCATCAGCCTATAAAGATAATGAAGGTAATGTGAATCTAAATGTTGAACCGT
ACAAATTACATAAAAATCATCCGCTAGCAAATGTAAATGGAACAGAAAAAGGAATTACGTTTTTTACAGATACGATGGGC
CAAGTTACTACAATTGGTGGTGCGTCAAATCCACGCGGAGCCGCAGCAGCAGCTTTAAAAGATATAATTAATTTATATCG
TAAAGATTTGTCACGTATTAACAGGGAGTAA

Upstream 100 bases:

>100_bases
TAGAGCAATTGCTGAAAAGCTATCACGTTTACCGAAATAGATAATAATAAAGCGCTCTCGATAGAATTCGGGGGCGCTTT
ATTATATATTAAAAGAGGGA

Downstream 100 bases:

>100_bases
AGTTACTAATTGATTAAAGTTGTATTTTATAAAACCGTACCGCCCTTTATAAAAAATACATATGCAGTGGACCTTTTGAG
AATGAAATAAATATGCAAAA

Product: homoserine dehydrogenase

Products: NA

Alternate protein names: HDH [H]

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MDRKIWGDIMKIKVVLSGYGTVGKEFIKLLNKKYLYINKTYGIDLVVSGVLGRNVAIHNEDGLSIHHLLRYGGGSCAIEK
YIEHHPEERATDNISGTVLVESTVTNLKDGNPGKQYIKQAIEKKMDIVAISKGALVTNWREINEAAKIANVRIRYSGATA
AALPTLDIGQFSLAGCHIEKIEGILNGTTNYILSKMNEEDITFEEALKEAQSKGIAETNPILDVSGSDSACKLLLLTNSL
MGTENKLTDIHIKGIEHVTKQQIRNAKEQNKIIKLIASAYKDNEGNVNLNVEPYKLHKNHPLANVNGTEKGITFFTDTMG
QVTTIGGASNPRGAAAAALKDIINLYRKDLSRINRE

Sequences:

>Translated_356_residues
MDRKIWGDIMKIKVVLSGYGTVGKEFIKLLNKKYLYINKTYGIDLVVSGVLGRNVAIHNEDGLSIHHLLRYGGGSCAIEK
YIEHHPEERATDNISGTVLVESTVTNLKDGNPGKQYIKQAIEKKMDIVAISKGALVTNWREINEAAKIANVRIRYSGATA
AALPTLDIGQFSLAGCHIEKIEGILNGTTNYILSKMNEEDITFEEALKEAQSKGIAETNPILDVSGSDSACKLLLLTNSL
MGTENKLTDIHIKGIEHVTKQQIRNAKEQNKIIKLIASAYKDNEGNVNLNVEPYKLHKNHPLANVNGTEKGITFFTDTMG
QVTTIGGASNPRGAAAAALKDIINLYRKDLSRINRE
>Mature_356_residues
MDRKIWGDIMKIKVVLSGYGTVGKEFIKLLNKKYLYINKTYGIDLVVSGVLGRNVAIHNEDGLSIHHLLRYGGGSCAIEK
YIEHHPEERATDNISGTVLVESTVTNLKDGNPGKQYIKQAIEKKMDIVAISKGALVTNWREINEAAKIANVRIRYSGATA
AALPTLDIGQFSLAGCHIEKIEGILNGTTNYILSKMNEEDITFEEALKEAQSKGIAETNPILDVSGSDSACKLLLLTNSL
MGTENKLTDIHIKGIEHVTKQQIRNAKEQNKIIKLIASAYKDNEGNVNLNVEPYKLHKNHPLANVNGTEKGITFFTDTMG
QVTTIGGASNPRGAAAAALKDIINLYRKDLSRINRE

Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]

COG id: COG0460

COG function: function code E; Homoserine dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the homoserine dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1786183, Length=200, Percent_Identity=25.5, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005106
- InterPro:   IPR001342
- InterPro:   IPR019811
- InterPro:   IPR022697
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]

EC number: =1.1.1.3 [H]

Molecular weight: Translated: 39082; Mature: 39082

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS01042 HOMOSER_DHGENASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRKIWGDIMKIKVVLSGYGTVGKEFIKLLNKKYLYINKTYGIDLVVSGVLGRNVAIHNE
CCCCHHHHHEEEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHCCCEEEECC
DGLSIHHLLRYGGGSCAIEKYIEHHPEERATDNISGTVLVESTVTNLKDGNPGKQYIKQA
CCCHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCEEEEEEEHHHCCCCCCCHHHHHHHH
IEKKMDIVAISKGALVTNWREINEAAKIANVRIRYSGATAAALPTLDIGQFSLAGCHIEK
HHHCCCEEEEECCCEEECHHHHHHHHHHEEEEEEECCCCCHHCCCCCCCCEEECCCHHHH
IEGILNGTTNYILSKMNEEDITFEEALKEAQSKGIAETNPILDVSGSDSACKLLLLTNSL
HHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEECHH
MGTENKLTDIHIKGIEHVTKQQIRNAKEQNKIIKLIASAYKDNEGNVNLNVEPYKLHKNH
CCCCCCCEEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECEEEEECCC
PLANVNGTEKGITFFTDTMGQVTTIGGASNPRGAAAAALKDIINLYRKDLSRINRE
CCCCCCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDRKIWGDIMKIKVVLSGYGTVGKEFIKLLNKKYLYINKTYGIDLVVSGVLGRNVAIHNE
CCCCHHHHHEEEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHCCCEEEECC
DGLSIHHLLRYGGGSCAIEKYIEHHPEERATDNISGTVLVESTVTNLKDGNPGKQYIKQA
CCCHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCEEEEEEEHHHCCCCCCCHHHHHHHH
IEKKMDIVAISKGALVTNWREINEAAKIANVRIRYSGATAAALPTLDIGQFSLAGCHIEK
HHHCCCEEEEECCCEEECHHHHHHHHHHEEEEEEECCCCCHHCCCCCCCCEEECCCHHHH
IEGILNGTTNYILSKMNEEDITFEEALKEAQSKGIAETNPILDVSGSDSACKLLLLTNSL
HHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEECHH
MGTENKLTDIHIKGIEHVTKQQIRNAKEQNKIIKLIASAYKDNEGNVNLNVEPYKLHKNH
CCCCCCCEEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECEEEEECCC
PLANVNGTEKGITFFTDTMGQVTTIGGASNPRGAAAAALKDIINLYRKDLSRINRE
CCCCCCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]