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The map label for this gene is oppC [H]

Identifier: 118477794

GI number: 118477794

Start: 2290990

End: 2292000

Strand: Direct

Name: oppC [H]

Synonym: BALH_2133

Alternate gene names: 118477794

Gene position: 2290990-2292000 (Clockwise)

Preceding gene: 118477793

Following gene: 118477796

Centisome position: 43.58

GC content: 35.91

Gene sequence:

>1011_bases
GTGTGTAACATGTGGGAAGTTGTAAAAAGAGATGTAAGATTTTGGATTGGTGTTACTTTTTTAAGTGTACTTATGATTGT
TAGTATTGGGAATACGTTGTTTTTCGACGGGAATATTCGCGAACTAACGATGATGTATAACGAAAAAGGAGAACTAGAGG
CTGCTCCGTTTTCACCGTCGAGTAAATTTTGGTTCGGAAGTGATGAGAAAGGACGCGACCTTTTCCAGTTAATAATAGAA
GGAGCAAAATGGACAGTTGGCGCGAGTGTAATTATAGCGATTTTACGAGTTATAGTTGGAGGGGGTATAGGCTTGCTTCT
TGGTATGTATAGCAAACGGTCTTTTCCAGTTATATCATCTTTTTTTGATCCGTTCAGTATTGTACCTATGGTTATGGTTT
CTTTCTTTGTATTAAAGGAAGTTTTAGTTTTTGAAAATGGGACAGTACCAGAACCGTTTCATTTAAGGGTAATATTTCAA
ATGGTTATCCTTATATGTTTAGCGGTACCAACAATTATGTTATATACAACGCAGGAAGTCCGTCGGATAAAAAGAGAAGA
ATTTATGATGGCAGCAACTGTGCTTGGGGGAAGTAATTGGCATAGAATGAAAAATCACGTATGGCCACACGTATTGCCAT
CATTTTTTTTACTTGTCGCCCAACAATTTGTGAGCACTTTATTACTTCTTTTACATCTTGGCTTGTTGGAGTTATTTTTT
GGTGGAACAATAATCTCTGGTTTAGAGGCAGATAGTGTAACGAAAGAATGGACTGGTCTAATTGGTCAAAACTTCCGCCA
CTTAACTACACATACATGGATTGTACTTATACCGATTGCTTTTTATAGTATGACAATTCTCGCAGGAAATCTAGTTAGTA
ATAGTATGCAAGATGCGATTAAACTAGGAAATGTAAGAATACCTAAGAGCAGGGATAAAGAAATGAAGGAAGAGAAACAA
GTACAACATACTGTGAATGATTTTTCATTCTATAAAGAAATACAAAAATAA

Upstream 100 bases:

>100_bases
AAATTAGAAATATTTACAGTGAGCTTAATTATGTTATACGTACCGCTTTTTATACTATTTCGTTTATTACATACGTTCTT
ACAAAATGTTATAAAGGAGC

Downstream 100 bases:

>100_bases
AGAGAGATAGCTGAAGACAAATTGTTTTCAGCTATCTTTTTTTGTTTAATTTAGTGATGTCCAGCTAGTAGAGTAAACAC
TATTATTAAGAAAAATCCAC

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MCNMWEVVKRDVRFWIGVTFLSVLMIVSIGNTLFFDGNIRELTMMYNEKGELEAAPFSPSSKFWFGSDEKGRDLFQLIIE
GAKWTVGASVIIAILRVIVGGGIGLLLGMYSKRSFPVISSFFDPFSIVPMVMVSFFVLKEVLVFENGTVPEPFHLRVIFQ
MVILICLAVPTIMLYTTQEVRRIKREEFMMAATVLGGSNWHRMKNHVWPHVLPSFFLLVAQQFVSTLLLLLHLGLLELFF
GGTIISGLEADSVTKEWTGLIGQNFRHLTTHTWIVLIPIAFYSMTILAGNLVSNSMQDAIKLGNVRIPKSRDKEMKEEKQ
VQHTVNDFSFYKEIQK

Sequences:

>Translated_336_residues
MCNMWEVVKRDVRFWIGVTFLSVLMIVSIGNTLFFDGNIRELTMMYNEKGELEAAPFSPSSKFWFGSDEKGRDLFQLIIE
GAKWTVGASVIIAILRVIVGGGIGLLLGMYSKRSFPVISSFFDPFSIVPMVMVSFFVLKEVLVFENGTVPEPFHLRVIFQ
MVILICLAVPTIMLYTTQEVRRIKREEFMMAATVLGGSNWHRMKNHVWPHVLPSFFLLVAQQFVSTLLLLLHLGLLELFF
GGTIISGLEADSVTKEWTGLIGQNFRHLTTHTWIVLIPIAFYSMTILAGNLVSNSMQDAIKLGNVRIPKSRDKEMKEEKQ
VQHTVNDFSFYKEIQK
>Mature_336_residues
MCNMWEVVKRDVRFWIGVTFLSVLMIVSIGNTLFFDGNIRELTMMYNEKGELEAAPFSPSSKFWFGSDEKGRDLFQLIIE
GAKWTVGASVIIAILRVIVGGGIGLLLGMYSKRSFPVISSFFDPFSIVPMVMVSFFVLKEVLVFENGTVPEPFHLRVIFQ
MVILICLAVPTIMLYTTQEVRRIKREEFMMAATVLGGSNWHRMKNHVWPHVLPSFFLLVAQQFVSTLLLLLHLGLLELFF
GGTIISGLEADSVTKEWTGLIGQNFRHLTTHTWIVLIPIAFYSMTILAGNLVSNSMQDAIKLGNVRIPKSRDKEMKEEKQ
VQHTVNDFSFYKEIQK

Specific function: Part of the ABC transporter complex ddpABCDF, which is probably involved in D,D-dipeptide transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=264, Percent_Identity=21.969696969697, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787054, Length=244, Percent_Identity=22.1311475409836, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38243; Mature: 38243

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCNMWEVVKRDVRFWIGVTFLSVLMIVSIGNTLFFDGNIRELTMMYNEKGELEAAPFSPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHEECCCCCCEECCCCCC
SKFWFGSDEKGRDLFQLIIEGAKWTVGASVIIAILRVIVGGGIGLLLGMYSKRSFPVISS
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHH
FFDPFSIVPMVMVSFFVLKEVLVFENGTVPEPFHLRVIFQMVILICLAVPTIMLYTTQEV
HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRIKREEFMMAATVLGGSNWHRMKNHVWPHVLPSFFLLVAQQFVSTLLLLLHLGLLELFF
HHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGTIISGLEADSVTKEWTGLIGQNFRHLTTHTWIVLIPIAFYSMTILAGNLVSNSMQDAI
CCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLGNVRIPKSRDKEMKEEKQVQHTVNDFSFYKEIQK
HHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCNMWEVVKRDVRFWIGVTFLSVLMIVSIGNTLFFDGNIRELTMMYNEKGELEAAPFSPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHEECCCCCCEECCCCCC
SKFWFGSDEKGRDLFQLIIEGAKWTVGASVIIAILRVIVGGGIGLLLGMYSKRSFPVISS
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHH
FFDPFSIVPMVMVSFFVLKEVLVFENGTVPEPFHLRVIFQMVILICLAVPTIMLYTTQEV
HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRIKREEFMMAATVLGGSNWHRMKNHVWPHVLPSFFLLVAQQFVSTLLLLLHLGLLELFF
HHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGTIISGLEADSVTKEWTGLIGQNFRHLTTHTWIVLIPIAFYSMTILAGNLVSNSMQDAI
CCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLGNVRIPKSRDKEMKEEKQVQHTVNDFSFYKEIQK
HHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]