| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is oppB
Identifier: 118477793
GI number: 118477793
Start: 2290131
End: 2290997
Strand: Direct
Name: oppB
Synonym: BALH_2132
Alternate gene names: NA
Gene position: 2290131-2290997 (Clockwise)
Preceding gene: 118477792
Following gene: 118477794
Centisome position: 43.56
GC content: 31.6
Gene sequence:
>867_bases ATGTTGATGCGAATGGTTAAGTGGTGTGGGATTACTGGTTTACAACTAGTAGCTGCAATTTTATGTATAATATGCCTAGG TGCACTACCGCGTTTATTTAAGGGATTGCAAATTGATTTAATCGGTTTTTGGAACACGATTGTATTTCTTGGAGGAAAGT TACTTCAACCGGGGGAAATAACATACGGTTTTCGGGACTCAAGAAAATTATTTCCGCAAATATGGATTCATTATTTAGAG ACAATGTTTGTGTTTATTTCGGCATTTTTACTGTCATTACTTATTGCATATCTTCTCGTTGTGTGGGTATTACAACGATC TCAATCAAAGCAACGAATGTGGAATGGGATTTTTGTCGCACTTGAAAGCATCCCAGATATTTTAATAATTTTATTATCTC AACTTCTAGTTGTAATAATCTTTCAAAAGACAGGGTTTATGCCAGTTAAACTTGCAGGGATTGGGGAGGAAAGGGCTCGC CTGTTGCCAATAATATGTCTCACTTTGCCTACAACGTTATTATTTATTAAGTTACTACTATTACGTTTTAGGGAAGAATT AGAGAAGGATTATAGTATATTTGCTAAAAGTAAAGGGCTTAGTTTAAGACATATTTTAACACATCATATTTCAAGAAATG TTTTGTTAACAACAATCTATTATGCAAAAACAAATATTTTATTTATGTTATCAAATCTATATATTATTGAATGGATATTT AATACGTACGGCATGTTTGTTTTTGTAAAAGAAAATTCGAAATTAGAAATATTTACAGTGAGCTTAATTATGTTATACGT ACCGCTTTTTATACTATTTCGTTTATTACATACGTTCTTACAAAATGTTATAAAGGAGCGTGTGTAA
Upstream 100 bases:
>100_bases CCTAGTGGGCAAAAGCGAGTACATGTTGTCGCTAAAGAAATGTGATATATTTAGCTTTTTTATTTCTGAATCTTCTATCT AATGGTAAGGGGAAATCGTT
Downstream 100 bases:
>100_bases CATGTGGGAAGTTGTAAAAAGAGATGTAAGATTTTGGATTGGTGTTACTTTTTTAAGTGTACTTATGATTGTTAGTATTG GGAATACGTTGTTTTTCGAC
Product: oligopeptide transport system, permease
Products: NA
Alternate protein names: Oligopeptide Transport System Permease Protein-Like Protein; Oligopeptide Transport System Permease
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MLMRMVKWCGITGLQLVAAILCIICLGALPRLFKGLQIDLIGFWNTIVFLGGKLLQPGEITYGFRDSRKLFPQIWIHYLE TMFVFISAFLLSLLIAYLLVVWVLQRSQSKQRMWNGIFVALESIPDILIILLSQLLVVIIFQKTGFMPVKLAGIGEERAR LLPIICLTLPTTLLFIKLLLLRFREELEKDYSIFAKSKGLSLRHILTHHISRNVLLTTIYYAKTNILFMLSNLYIIEWIF NTYGMFVFVKENSKLEIFTVSLIMLYVPLFILFRLLHTFLQNVIKERV
Sequences:
>Translated_288_residues MLMRMVKWCGITGLQLVAAILCIICLGALPRLFKGLQIDLIGFWNTIVFLGGKLLQPGEITYGFRDSRKLFPQIWIHYLE TMFVFISAFLLSLLIAYLLVVWVLQRSQSKQRMWNGIFVALESIPDILIILLSQLLVVIIFQKTGFMPVKLAGIGEERAR LLPIICLTLPTTLLFIKLLLLRFREELEKDYSIFAKSKGLSLRHILTHHISRNVLLTTIYYAKTNILFMLSNLYIIEWIF NTYGMFVFVKENSKLEIFTVSLIMLYVPLFILFRLLHTFLQNVIKERV >Mature_288_residues MLMRMVKWCGITGLQLVAAILCIICLGALPRLFKGLQIDLIGFWNTIVFLGGKLLQPGEITYGFRDSRKLFPQIWIHYLE TMFVFISAFLLSLLIAYLLVVWVLQRSQSKQRMWNGIFVALESIPDILIILLSQLLVVIIFQKTGFMPVKLAGIGEERAR LLPIICLTLPTTLLFIKLLLLRFREELEKDYSIFAKSKGLSLRHILTHHISRNVLLTTIYYAKTNILFMLSNLYIIEWIF NTYGMFVFVKENSKLEIFTVSLIMLYVPLFILFRLLHTFLQNVIKERV
Specific function: Unknown
COG id: COG0601
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33482; Mature: 33482
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS50928 ABC_TM1 ; PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMRMVKWCGITGLQLVAAILCIICLGALPRLFKGLQIDLIGFWNTIVFLGGKLLQPGEI CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCE TYGFRDSRKLFPQIWIHYLETMFVFISAFLLSLLIAYLLVVWVLQRSQSKQRMWNGIFVA EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LESIPDILIILLSQLLVVIIFQKTGFMPVKLAGIGEERARLLPIICLTLPTTLLFIKLLL HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH LRFREELEKDYSIFAKSKGLSLRHILTHHISRNVLLTTIYYAKTNILFMLSNLYIIEWIF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NTYGMFVFVKENSKLEIFTVSLIMLYVPLFILFRLLHTFLQNVIKERV HHCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLMRMVKWCGITGLQLVAAILCIICLGALPRLFKGLQIDLIGFWNTIVFLGGKLLQPGEI CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCE TYGFRDSRKLFPQIWIHYLETMFVFISAFLLSLLIAYLLVVWVLQRSQSKQRMWNGIFVA EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LESIPDILIILLSQLLVVIIFQKTGFMPVKLAGIGEERARLLPIICLTLPTTLLFIKLLL HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH LRFREELEKDYSIFAKSKGLSLRHILTHHISRNVLLTTIYYAKTNILFMLSNLYIIEWIF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NTYGMFVFVKENSKLEIFTVSLIMLYVPLFILFRLLHTFLQNVIKERV HHCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA