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The map label for this gene is xyn11A [H]

Identifier: 118477300

GI number: 118477300

Start: 1762177

End: 1762881

Strand: Reverse

Name: xyn11A [H]

Synonym: BALH_1615

Alternate gene names: 118477300

Gene position: 1762881-1762177 (Counterclockwise)

Preceding gene: 118477304

Following gene: 118477298

Centisome position: 33.53

GC content: 29.93

Gene sequence:

>705_bases
ATGAAAAAGAAAATAATTATTACAATCGTTACATTATTCATTATTACTGTAGCATTGTTCGGAACGTATAAGTTGATGAA
CGCAAGAAGTCTTCAATTGTTTGGAGATTTAACAAATCGAGTAGAAACAAATGAAAAAGTGATTGCTTTAACTTTTGATG
ATGGCCCTACTAACAATGTAAAACAAATATTACCTCTACTAGATAAGTACAATGCGAAAGCTACTTTCTTTTTAATCGGA
AATGAATTAGAGAAAAACCTATCGTTAGGAGAAGATATTGTACACTCTGGACACCAAGTTGGAAACCATACATATTCTCA
TAACAGAATGGTTTTTAAAACACCTTCTTTTATTAAAGAAGAAATAGAAAAAACAAATTCATTAATCCGCCGAATAGGAT
TTACAGGCGAAATTGATTTTAGACCACCTAATGGAAAAAAATTAATTGGACTACCATATTATTTAAATAAAAATAATATC
GAAACGATCACATGGGATCTTGAACCTGATACTTTTTATAAATCTGCGGCAGATAAAATTGACTACGTTTCTAAAAATGT
AAAACCAGGTTCTATCATTTTACTGCACTCTATGTATGATGAGTCTAATGAAAATTTACAGACTATCGAAGGTATTCTAG
ACTCTTTATCTAAGAAGGGCTATCAGTTCGTAACAGTAAATGAATTACAAAAAAGTGCAAAATAA

Upstream 100 bases:

>100_bases
AATTCCTTCCCCTTGCATCCACATCCTTTTTAAAGCATGAAACTACTTAGTTTGATATAATACTTTTTAGTCCAATCAAA
AACTATAGTGAGGTTGCTTT

Downstream 100 bases:

>100_bases
AAAGGTAGCGTATCATAAAACGATACGCTACCTTTCTTTTTAAATAATGCCAAGTACATTTAAGAATACGATAATAATCG
CAATTGGTGCGATAAAGCGA

Product: polysaccharide deacetylase, chitooligosaccharide deacetylase

Products: NA

Alternate protein names: Endo-1,4-beta-xylanase 11A; Xylanase xyn11A; Xylanase xynT; Acetylated xylan deacetylase [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKKKIIITIVTLFIITVALFGTYKLMNARSLQLFGDLTNRVETNEKVIALTFDDGPTNNVKQILPLLDKYNAKATFFLIG
NELEKNLSLGEDIVHSGHQVGNHTYSHNRMVFKTPSFIKEEIEKTNSLIRRIGFTGEIDFRPPNGKKLIGLPYYLNKNNI
ETITWDLEPDTFYKSAADKIDYVSKNVKPGSIILLHSMYDESNENLQTIEGILDSLSKKGYQFVTVNELQKSAK

Sequences:

>Translated_234_residues
MKKKIIITIVTLFIITVALFGTYKLMNARSLQLFGDLTNRVETNEKVIALTFDDGPTNNVKQILPLLDKYNAKATFFLIG
NELEKNLSLGEDIVHSGHQVGNHTYSHNRMVFKTPSFIKEEIEKTNSLIRRIGFTGEIDFRPPNGKKLIGLPYYLNKNNI
ETITWDLEPDTFYKSAADKIDYVSKNVKPGSIILLHSMYDESNENLQTIEGILDSLSKKGYQFVTVNELQKSAK
>Mature_234_residues
MKKKIIITIVTLFIITVALFGTYKLMNARSLQLFGDLTNRVETNEKVIALTFDDGPTNNVKQILPLLDKYNAKATFFLIG
NELEKNLSLGEDIVHSGHQVGNHTYSHNRMVFKTPSFIKEEIEKTNSLIRRIGFTGEIDFRPPNGKKLIGLPYYLNKNNI
ETITWDLEPDTFYKSAADKIDYVSKNVKPGSIILLHSMYDESNENLQTIEGILDSLSKKGYQFVTVNELQKSAK

Specific function: Endo-acting xylanase which specifically cleaves internal linkages on the xylan backbone, releasing xylooligosaccharides. Is also probably able, via its C-terminal domain, to remove acetyl groups from acetylated xylan, and thus it is probably capable of hy

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 polysaccharide deacetylase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005084
- InterPro:   IPR008985
- InterPro:   IPR008979
- InterPro:   IPR011330
- InterPro:   IPR001137
- InterPro:   IPR013319
- InterPro:   IPR018208
- InterPro:   IPR002509 [H]

Pfam domain/function: PF03422 CBM_6; PF00457 Glyco_hydro_11; PF01522 Polysacc_deac_1 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 26594; Mature: 26594

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIIITIVTLFIITVALFGTYKLMNARSLQLFGDLTNRVETNEKVIALTFDDGPTNNV
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCH
KQILPLLDKYNAKATFFLIGNELEKNLSLGEDIVHSGHQVGNHTYSHNRMVFKTPSFIKE
HHHHHHHHCCCCCEEEEEECCHHHHHCCCCHHHHHCCHHHCCCEECCCEEEEECHHHHHH
EIEKTNSLIRRIGFTGEIDFRPPNGKKLIGLPYYLNKNNIETITWDLEPDTFYKSAADKI
HHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHH
DYVSKNVKPGSIILLHSMYDESNENLQTIEGILDSLSKKGYQFVTVNELQKSAK
HHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHCC
>Mature Secondary Structure
MKKKIIITIVTLFIITVALFGTYKLMNARSLQLFGDLTNRVETNEKVIALTFDDGPTNNV
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCH
KQILPLLDKYNAKATFFLIGNELEKNLSLGEDIVHSGHQVGNHTYSHNRMVFKTPSFIKE
HHHHHHHHCCCCCEEEEEECCHHHHHCCCCHHHHHCCHHHCCCEECCCEEEEECHHHHHH
EIEKTNSLIRRIGFTGEIDFRPPNGKKLIGLPYYLNKNNIETITWDLEPDTFYKSAADKI
HHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHH
DYVSKNVKPGSIILLHSMYDESNENLQTIEGILDSLSKKGYQFVTVNELQKSAK
HHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA