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The map label for this gene is ygaJ [H]

Identifier: 118477248

GI number: 118477248

Start: 1701508

End: 1702227

Strand: Reverse

Name: ygaJ [H]

Synonym: BALH_1557

Alternate gene names: 118477248

Gene position: 1702227-1701508 (Counterclockwise)

Preceding gene: 118477255

Following gene: 118477240

Centisome position: 32.38

GC content: 33.75

Gene sequence:

>720_bases
ATGATTAGGTGGTGCTTTACTATGAAATTAGCTGTCATTGGTGGCGGTGATTTACAAGATTCCAATCACTCGCCTATTAA
TGAGCGACTTATAGAATTAACAAATAAACAATATCCGAAAGTATTATTCATTCCTACAGCTAGTCATGATGATGAAAGCT
ATATAAAATTATTTTTAGACACATTTGAAAAACAATTACACTGTGACGTACAAATTTTAGGTATTATAGCTGATACACCT
TCTAAATATGAAATAGACGAAATGATTCAGTCTGCTGATTTAATTTATCTCGGTGGCGGGAACTATATTCAAATGGTTAC
AGAATGGAAAGAACATAAACTCGATGAAAAATTACTATTGGCTCTTGAGCAAGGAACGCTCATTGCAGGATACAGCGCTG
GTGCTATGTGCTGGTTCACATCTAGCATCCGCTCAGATTATGAAGGTTCTGGTTATATAGAGAGCAACGGCTGGGGAATT
GTGAACAAAAGATTTTGTCCACATTATAATCAATTAAATAGAATGAACGCCTTCCATTCCTTTTTACAAAATCATCAAGG
TAATATAGAAGGCATTGCACTAGAGGATAATTGCGCCTTATATATTACAGAAGAATCTTTTGAAATTATCGGTGAACCAG
AAAAAGCTTGGGAGTTTTATATGAGTGATAACAAACTCATTAGACAACATTTTGATATTACTTTAAAAAGTTATTTGTAA

Upstream 100 bases:

>100_bases
TTGCTTTACTATTCCGATATATTTAAACTATATTTTCTACTTAATCATTACATCACAGAAGGAATGTAACTCTCTTCTAT
CGAATTTTTATATAACGAAA

Downstream 100 bases:

>100_bases
CCTACACTTACAAATAATGTCCCTAAGTATAATAACTTAGGGACATTTTCATGATTTAACTCACTAATCGTGTAATTCGT
TTCTTCTGCCATGAAAGCTT

Product: peptidase E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MIRWCFTMKLAVIGGGDLQDSNHSPINERLIELTNKQYPKVLFIPTASHDDESYIKLFLDTFEKQLHCDVQILGIIADTP
SKYEIDEMIQSADLIYLGGGNYIQMVTEWKEHKLDEKLLLALEQGTLIAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGI
VNKRFCPHYNQLNRMNAFHSFLQNHQGNIEGIALEDNCALYITEESFEIIGEPEKAWEFYMSDNKLIRQHFDITLKSYL

Sequences:

>Translated_239_residues
MIRWCFTMKLAVIGGGDLQDSNHSPINERLIELTNKQYPKVLFIPTASHDDESYIKLFLDTFEKQLHCDVQILGIIADTP
SKYEIDEMIQSADLIYLGGGNYIQMVTEWKEHKLDEKLLLALEQGTLIAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGI
VNKRFCPHYNQLNRMNAFHSFLQNHQGNIEGIALEDNCALYITEESFEIIGEPEKAWEFYMSDNKLIRQHFDITLKSYL
>Mature_239_residues
MIRWCFTMKLAVIGGGDLQDSNHSPINERLIELTNKQYPKVLFIPTASHDDESYIKLFLDTFEKQLHCDVQILGIIADTP
SKYEIDEMIQSADLIYLGGGNYIQMVTEWKEHKLDEKLLLALEQGTLIAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGI
VNKRFCPHYNQLNRMNAFHSFLQNHQGNIEGIALEDNCALYITEESFEIIGEPEKAWEFYMSDNKLIRQHFDITLKSYL

Specific function: Unknown

COG id: COG3340

COG function: function code E; Peptidase E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: NA

Molecular weight: Translated: 27484; Mature: 27484

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRWCFTMKLAVIGGGDLQDSNHSPINERLIELTNKQYPKVLFIPTASHDDESYIKLFLD
CEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHH
TFEKQLHCDVQILGIIADTPSKYEIDEMIQSADLIYLGGGNYIQMVTEWKEHKLDEKLLL
HHHHHHCCCEEEEEEEECCCCCCCHHHHHHHCCEEEECCCCEEEEEHHHHHHCCCHHHEE
ALEQGTLIAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGIVNKRFCPHYNQLNRMNAFHS
EEECCCEEEECCCCEEEEEEHHHHCCCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHH
FLQNHQGNIEGIALEDNCALYITEESFEIIGEPEKAWEFYMSDNKLIRQHFDITLKSYL
HHHCCCCCEEEEEEECCEEEEEECCCEEECCCCHHHEEEEECCCHHHHHHHCEEEECCC
>Mature Secondary Structure
MIRWCFTMKLAVIGGGDLQDSNHSPINERLIELTNKQYPKVLFIPTASHDDESYIKLFLD
CEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHH
TFEKQLHCDVQILGIIADTPSKYEIDEMIQSADLIYLGGGNYIQMVTEWKEHKLDEKLLL
HHHHHHCCCEEEEEEEECCCCCCCHHHHHHHCCEEEECCCCEEEEEHHHHHHCCCHHHEE
ALEQGTLIAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGIVNKRFCPHYNQLNRMNAFHS
EEECCCEEEECCCCEEEEEEHHHHCCCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHH
FLQNHQGNIEGIALEDNCALYITEESFEIIGEPEKAWEFYMSDNKLIRQHFDITLKSYL
HHHCCCCCEEEEEEECCEEEEEECCCEEECCCCHHHEEEEECCCHHHHHHHCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]