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The map label for this gene is fecI [C]

Identifier: 118476332

GI number: 118476332

Start: 683533

End: 684090

Strand: Direct

Name: fecI [C]

Synonym: BALH_0588

Alternate gene names: 118476332

Gene position: 683533-684090 (Clockwise)

Preceding gene: 118476331

Following gene: 118476333

Centisome position: 13.0

GC content: 32.62

Gene sequence:

>558_bases
ATGAAAGTTACAGACAACGATTATGAAAAGATGGAAGAGCTATATGAGTTGTACGAACAAAAAGTTTATTATGTAGCTTA
TTCTATTTTAAATAATATTCAACAGGCTGAAGATGCGGTTCAAGAGACATTTATTACTCTTTATAAAAATTTGGAAAAGC
TTCATAACTTGAATATTCAAGAGCTTAAACGCTACATTTTGAGGGTCGCGAAAAACAAGGCGATTGATAGTTATCGGAAA
AATAAACGACATGAAACATTTTTAGAAGAATATGAAAGAGAATCAATAGAAGCGGTAGATGAAAATATTGAAGAGTGGGA
AAAACGGAAAATGTCTGAAGTTCAAATTGATACATTGCTAAAAGAGTTAAATGAGTCTAATAGACAGGTGTTTAAGTACA
AAGTCTTCTATAACTTAACGTATCAAGAAATTTCAAGTGTCATGGGGATAACGGAGGCTAATGTTCGCAAGCAGTTTGAA
CGCGCTCGAAAACGAGTCCAAAATATGATAGGAGGTATACAACATGACGAATTCAAAGAACTCCAAAGAAATATATGA

Upstream 100 bases:

>100_bases
GGCTTTTTTTATTCTGTTATTAAATTTTACATATAAAAAGATTTTACAGTGTCACAAAGTATAGTGCTCATTCGTTATAT
AGAGTGAGAGGAGGAATCAT

Downstream 100 bases:

>100_bases
ATTTGCTGAAAAAATCGCTTTAGATGATTTTGATAAAATCGAAGAAAAACATGAATTTTCAAATACATATACACGTAAAA
AGAAATTGTTTATGGAGGAA

Product: RNA polymerase sigma factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-70 Factor ECF Subfamily; Sigma-70 Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma Factor SigJ

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKVTDNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHNLNIQELKRYILRVAKNKAIDSYRK
NKRHETFLEEYERESIEAVDENIEEWEKRKMSEVQIDTLLKELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFE
RARKRVQNMIGGIQHDEFKELQRNI

Sequences:

>Translated_185_residues
MKVTDNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHNLNIQELKRYILRVAKNKAIDSYRK
NKRHETFLEEYERESIEAVDENIEEWEKRKMSEVQIDTLLKELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFE
RARKRVQNMIGGIQHDEFKELQRNI
>Mature_185_residues
MKVTDNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHNLNIQELKRYILRVAKNKAIDSYRK
NKRHETFLEEYERESIEAVDENIEEWEKRKMSEVQIDTLLKELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFE
RARKRVQNMIGGIQHDEFKELQRNI

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22527; Mature: 22527

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTDNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHNLNIQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ELKRYILRVAKNKAIDSYRKNKRHETFLEEYERESIEAVDENIEEWEKRKMSEVQIDTLL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFERARKRVQNMIGGIQHDEFKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LQRNI
HHHCC
>Mature Secondary Structure
MKVTDNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHNLNIQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ELKRYILRVAKNKAIDSYRKNKRHETFLEEYERESIEAVDENIEEWEKRKMSEVQIDTLL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFERARKRVQNMIGGIQHDEFKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LQRNI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA