Click here to switch to the map view.

The map label for this gene is yhdP [H]

Identifier: 118476293

GI number: 118476293

Start: 633709

End: 635007

Strand: Direct

Name: yhdP [H]

Synonym: BALH_0547

Alternate gene names: 118476293

Gene position: 633709-635007 (Clockwise)

Preceding gene: 118476292

Following gene: 118476294

Centisome position: 12.05

GC content: 34.87

Gene sequence:

>1299_bases
GTGGATATTTTAAAATTACTGATGGTAGCCATCCTTATTGGATTAACAGCATTTTTTGTAGCTGTTGAGTTTGCAATTAT
TAAGGTGCGTAGCAGTCGTATTGATCAACTCGTTAGTGAAAAACGACGAGGAGCATTGGCAGCGAAAAAAGTAACTTCGA
ACTTAGATGAGTATTTATCAGCATGTCAGTTAGGTATTACAATTACCGCTTTAGGACTTGGGTGGTTAGGCGAGCCGACT
ATAAAACATTTACTTGAGCCGTTGTTTTTAAAACTAAACTTATCCCCTGCAATTGCAAGTACCGTTTCATTTATTATTGC
TTTTGCAGTTATTACGTTTTTACATGTTGTTATTGGTGAACTTGCTCCAAAGACGTTCGCCATACAAAGAGCAGAGCAAG
TTAGCTTATTATTATCGAAGCCACTTATTTACTTTTACCGAATAATGTATCCGTTTATTTGGGCTTTAAACGGTTCGGCA
AGGCTTGTAACAGGGTTATTCGGTTTACATCCAGCTTCTGAACATGAAGTAGCTCATTCAGAAGAAGAATTACGATTAAT
CTTATCTGAGAGTTATGAGAGCGGAGAGATTAATCAAAGGGAATTTAAATATGTAAATAACATTTTTGAATTTGATAATA
GAGTAGCAAAGGAAATTATGGTGCCTCGTACGGAAGTTATAGGTTTATATGAGGACGAACCATTTGAAACACATATTAAA
ATAATCGCACAAGAAAAATATACGAGGTATCCTGTATTTGGTGAAGATAAAGATGAAATCATTGGGATGGTTAATGTAAA
GGATTTATTTATTCGTTATATGGATGGTAATCGGGACGAGGAATGCTCCATTACGCCATATACAAGACCAGTTATTGAAG
TGTTAGAAAATATTCCTATACATGATTTGCTATTACAAATGCAAAGAAAACATATTCCATTAGCTGTGTTGTATGATGAA
TACGGAGGTACAGCAGGGATTGTTACATTAGAAGATATTTTAGAAGAAATTGTTGGAGAAATCCGAGATGAATACGATGA
AGATGAACACCCGCCTATAGAGCATATAAGTGAAGGGTGTAAAATTGTAGAAGGAAAAGTGCTTATTAGTGAAGTGAATG
ATTTATTTGGCATTCACTTAATCGCTGATGATATAGATACAATTGGTGGCTGGATTATGGTACAAAAGCAAATCGTTGCT
GAAGGAGATATTATTGAGAAACACGGCTTTTCTTTTAAAGTTCTGGAAAAAGATATGCATCAAATTAAACGAGTGGAAAT
AAAGAAGGTAGAAGAATGA

Upstream 100 bases:

>100_bases
GAATTTTATATAGGGTTGCTTTTGAGTAAATGAAGAAACTAAAGTGAAACTTCTTTTTAAAAGGAGGTGTAACTTTAGCT
AAGAAAGCTAAAGGGTATAT

Downstream 100 bases:

>100_bases
TTTTCTATAAAAGTTATATATAGAAAATTAAATGTTTGCGCTTTCAAAAAGGTGCTATATAGTGAAGGTGGACACTGAAA
AATTCTTCTACATGATACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLSACQLGITITALGLGWLGEPT
IKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGELAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWALNGSA
RLVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGCKIVEGKVLISEVNDLFGIHLIADDIDTIGGWIMVQKQIVA
EGDIIEKHGFSFKVLEKDMHQIKRVEIKKVEE

Sequences:

>Translated_432_residues
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLSACQLGITITALGLGWLGEPT
IKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGELAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWALNGSA
RLVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGCKIVEGKVLISEVNDLFGIHLIADDIDTIGGWIMVQKQIVA
EGDIIEKHGFSFKVLEKDMHQIKRVEIKKVEE
>Mature_432_residues
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLSACQLGITITALGLGWLGEPT
IKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGELAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWALNGSA
RLVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGCKIVEGKVLISEVNDLFGIHLIADDIDTIGGWIMVQKQIVA
EGDIIEKHGFSFKVLEKDMHQIKRVEIKKVEE

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=394, Percent_Identity=48.7309644670051, Blast_Score=382, Evalue=1e-106,
Organism=Escherichia coli, GI1790664, Length=433, Percent_Identity=23.094688221709, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI145693175, Length=418, Percent_Identity=25.1196172248804, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1786879, Length=257, Percent_Identity=30.7392996108949, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI87082033, Length=234, Percent_Identity=23.9316239316239, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1788119, Length=238, Percent_Identity=25.2100840336134, Blast_Score=66, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17539402, Length=243, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 49066; Mature: 49066

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ACQLGITITALGLGWLGEPTIKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGE
HHHHCCEEEEECCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWALNGSARLVTGLFGLHPASEHEVAHS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCC
EEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCHHHHHH
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPI
EEECCCCCCCCCCCCCHHHEEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCH
HDLLLQMQRKHIPLAVLYDEYGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGC
HHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
KIVEGKVLISEVNDLFGIHLIADDIDTIGGWIMVQKQIVAEGDIIEKHGFSFKVLEKDMH
EEEECHHHHHHHHHHHHHEEEHHHHHHHCCHHEEHHHHHHCCCEEHHCCCCHHHHHHHHH
QIKRVEIKKVEE
HHHHHHHHHCCC
>Mature Secondary Structure
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ACQLGITITALGLGWLGEPTIKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGE
HHHHCCEEEEECCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWALNGSARLVTGLFGLHPASEHEVAHS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCC
EEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCHHHHHH
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPI
EEECCCCCCCCCCCCCHHHEEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCH
HDLLLQMQRKHIPLAVLYDEYGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGC
HHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
KIVEGKVLISEVNDLFGIHLIADDIDTIGGWIMVQKQIVAEGDIIEKHGFSFKVLEKDMH
EEEECHHHHHHHHHHHHHEEEHHHHHHHCCHHEEHHHHHHCCCEEHHCCCCHHHHHHHHH
QIKRVEIKKVEE
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]