| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is hppD [H]
Identifier: 118475988
GI number: 118475988
Start: 237251
End: 238420
Strand: Direct
Name: hppD [H]
Synonym: BALH_0225
Alternate gene names: 118475988
Gene position: 237251-238420 (Clockwise)
Preceding gene: 118475986
Following gene: 118475989
Centisome position: 4.51
GC content: 36.24
Gene sequence:
>1170_bases TTGGTTTTAAGTATGAACCATTTAATCTATTTACAGGGGGATGAGGATTTTATGAAACAAAAATCTATGGATACGCTAGC TGCACAAATGGAGGACTTTTTTCCAGTACGTGATGTAGATCATTTGGAATTTTACGTAGGAAATGCAAAGCAATCAAGTT ATTATCTTGCGAGAGCATTCGGATTCAAAATTGTGGCTTACTCTGGATTAGAAACTGGTAATCGTGAAAAAGTATCTTAT GTTCTTGTGCAAAAAAACATGCGTTTTGTTGTGTCTGGGGCTTTAAGTAGTGACAATCGTATTGCAGAGTTTGTAAAGAC TCATGGTGATGGCGTGAAAGATGTAGCATTACTTGTTGACGATGTTGATAAAGCATACTCAGAAGCAGTGAAACGTGGTG CCGTCGCAATTGCTCCGCCTGTAGAGTTAACAGATGAGAACGGTACATTGAAAAAAGCAGTTATTGGTACGTATGGTGAT ACAATTCATACGCTTGTAGAGCGTAAAAATTATAAAGGGACATTTATGCCAGGATTCCAAAAGGCTGAGTTTGATATTCC ATTTGAAGAGTCAGGTTTAATTGCTGTAGACCATGTAGTTGGTAATGTTGAAAAGATGGAAGAGTGGGTTAGTTATTACG AGAACGTTATGGGCTTTAAACAAATGATCCATTTTGATGATGATGATATTAGTACAGAGTATTCAGCATTAATGTCGAAG GTTATGACAAATGGAAGTCGTATTAAGTTCCCTATTAACGAGCCAGCAGATGGAAAGAGAAAATCACAAATTCAAGAATA TCTAGAGTTCTATAATGGAGCAGGTGTACAGCATCTTGCTTTACTAACAAATGACATTGTTAAAACAGTAGAAGCGCTAC GTGCAAATGGTGTGGAGTTTTTAGATACACCAGATACTTATTATGATGAGTTAACTGCACGAGTTGGAAAAATTGATGAG GAAATTGATAAGTTGAAAGAATTAAAGATTTTAGTAGATCGCGATGATGAAGGATACTTACTACAAATCTTTACGAAACC AATTGTAGATCGTCCAACTTTATTTATTGAAATCATTCAGCGTAAAGGTTCTCGTGGATTTGGAGAAGGAAACTTTAAAG CGTTATTCGAATCAATTGAAAGAGAACAAGAGCGTCGCGGGAATTTATAA
Upstream 100 bases:
>100_bases AAAAAAGAGGAATTTGACAGAAAAGATAGAAAATTTTAAAGGTCAGAATTTGTTAGCTTGCTAACTAATTTCTATTAATT GATGTTGGAAGCGTTTTCGG
Downstream 100 bases:
>100_bases AATTTATATCCACCAGCAATAATTCTTTTGCTGGTGGAAATTTCATTTTCATAGGGAGGAATCATGATGAAATTTGTTAC ATTTCGTCTTCCTTCAAAAG
Product: 4-hydroxyphenylpyruvate dioxygenase
Products: NA
Alternate protein names: 4HPPD; HPD; HPPDase [H]
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MVLSMNHLIYLQGDEDFMKQKSMDTLAAQMEDFFPVRDVDHLEFYVGNAKQSSYYLARAFGFKIVAYSGLETGNREKVSY VLVQKNMRFVVSGALSSDNRIAEFVKTHGDGVKDVALLVDDVDKAYSEAVKRGAVAIAPPVELTDENGTLKKAVIGTYGD TIHTLVERKNYKGTFMPGFQKAEFDIPFEESGLIAVDHVVGNVEKMEEWVSYYENVMGFKQMIHFDDDDISTEYSALMSK VMTNGSRIKFPINEPADGKRKSQIQEYLEFYNGAGVQHLALLTNDIVKTVEALRANGVEFLDTPDTYYDELTARVGKIDE EIDKLKELKILVDRDDEGYLLQIFTKPIVDRPTLFIEIIQRKGSRGFGEGNFKALFESIEREQERRGNL
Sequences:
>Translated_389_residues MVLSMNHLIYLQGDEDFMKQKSMDTLAAQMEDFFPVRDVDHLEFYVGNAKQSSYYLARAFGFKIVAYSGLETGNREKVSY VLVQKNMRFVVSGALSSDNRIAEFVKTHGDGVKDVALLVDDVDKAYSEAVKRGAVAIAPPVELTDENGTLKKAVIGTYGD TIHTLVERKNYKGTFMPGFQKAEFDIPFEESGLIAVDHVVGNVEKMEEWVSYYENVMGFKQMIHFDDDDISTEYSALMSK VMTNGSRIKFPINEPADGKRKSQIQEYLEFYNGAGVQHLALLTNDIVKTVEALRANGVEFLDTPDTYYDELTARVGKIDE EIDKLKELKILVDRDDEGYLLQIFTKPIVDRPTLFIEIIQRKGSRGFGEGNFKALFESIEREQERRGNL >Mature_389_residues MVLSMNHLIYLQGDEDFMKQKSMDTLAAQMEDFFPVRDVDHLEFYVGNAKQSSYYLARAFGFKIVAYSGLETGNREKVSY VLVQKNMRFVVSGALSSDNRIAEFVKTHGDGVKDVALLVDDVDKAYSEAVKRGAVAIAPPVELTDENGTLKKAVIGTYGD TIHTLVERKNYKGTFMPGFQKAEFDIPFEESGLIAVDHVVGNVEKMEEWVSYYENVMGFKQMIHFDDDDISTEYSALMSK VMTNGSRIKFPINEPADGKRKSQIQEYLEFYNGAGVQHLALLTNDIVKTVEALRANGVEFLDTPDTYYDELTARVGKIDE EIDKLKELKILVDRDDEGYLLQIFTKPIVDRPTLFIEIIQRKGSRGFGEGNFKALFESIEREQERRGNL
Specific function: Unknown
COG id: COG3185
COG function: function code ER; 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4HPPD family [H]
Homologues:
Organism=Homo sapiens, GI4504477, Length=362, Percent_Identity=49.171270718232, Blast_Score=327, Evalue=9e-90, Organism=Homo sapiens, GI285002264, Length=344, Percent_Identity=49.4186046511628, Blast_Score=310, Evalue=1e-84, Organism=Homo sapiens, GI14249394, Length=374, Percent_Identity=26.7379679144385, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17555220, Length=364, Percent_Identity=49.7252747252747, Blast_Score=340, Evalue=6e-94, Organism=Caenorhabditis elegans, GI17550752, Length=366, Percent_Identity=37.7049180327869, Blast_Score=241, Evalue=6e-64, Organism=Drosophila melanogaster, GI24667510, Length=361, Percent_Identity=49.0304709141274, Blast_Score=330, Evalue=1e-90, Organism=Drosophila melanogaster, GI21356105, Length=292, Percent_Identity=51.3698630136986, Blast_Score=286, Evalue=2e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005956 - InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.27 [H]
Molecular weight: Translated: 44087; Mature: 44087
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSMNHLIYLQGDEDFMKQKSMDTLAAQMEDFFPVRDVDHLEFYVGNAKQSSYYLARAF CEEEECCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCHHHHHHHH GFKIVAYSGLETGNREKVSYVLVQKNMRFVVSGALSSDNRIAEFVKTHGDGVKDVALLVD CEEEEEEECCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHH DVDKAYSEAVKRGAVAIAPPVELTDENGTLKKAVIGTYGDTIHTLVERKNYKGTFMPGFQ HHHHHHHHHHHCCCEEECCCCEEECCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC KAEFDIPFEESGLIAVDHVVGNVEKMEEWVSYYENVMGFKQMIHFDDDDISTEYSALMSK CCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH VMTNGSRIKFPINEPADGKRKSQIQEYLEFYNGAGVQHLALLTNDIVKTVEALRANGVEF HHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEE LDTPDTYYDELTARVGKIDEEIDKLKELKILVDRDDEGYLLQIFTKPIVDRPTLFIEIIQ ECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECCCCCCCCHHHHHHHH RKGSRGFGEGNFKALFESIEREQERRGNL HCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVLSMNHLIYLQGDEDFMKQKSMDTLAAQMEDFFPVRDVDHLEFYVGNAKQSSYYLARAF CEEEECCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCHHHHHHHH GFKIVAYSGLETGNREKVSYVLVQKNMRFVVSGALSSDNRIAEFVKTHGDGVKDVALLVD CEEEEEEECCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHH DVDKAYSEAVKRGAVAIAPPVELTDENGTLKKAVIGTYGDTIHTLVERKNYKGTFMPGFQ HHHHHHHHHHHCCCEEECCCCEEECCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC KAEFDIPFEESGLIAVDHVVGNVEKMEEWVSYYENVMGFKQMIHFDDDDISTEYSALMSK CCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH VMTNGSRIKFPINEPADGKRKSQIQEYLEFYNGAGVQHLALLTNDIVKTVEALRANGVEF HHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEE LDTPDTYYDELTARVGKIDEEIDKLKELKILVDRDDEGYLLQIFTKPIVDRPTLFIEIIQ ECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECCCCCCCCHHHHHHHH RKGSRGFGEGNFKALFESIEREQERRGNL HCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8071207; 11572948; 12692562 [H]