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The map label for this gene is 117920010

Identifier: 117920010

GI number: 117920010

Start: 1824497

End: 1825846

Strand: Direct

Name: 117920010

Synonym: Shewana3_1562

Alternate gene names: NA

Gene position: 1824497-1825846 (Clockwise)

Preceding gene: 117920005

Following gene: 117920011

Centisome position: 36.69

GC content: 49.48

Gene sequence:

>1350_bases
ATGAAGCAACAACAAACGGACTTGGGCAAAGATCCAAGAACTATGGTCACCCCTAAGGCATTCACTATTGCCGAATCGGT
ACTTTATACCCCGTTAGCTACGCCATTTAAGCGGGCATTGGCGATGTTAATCGACGGTTTATTTATCACTATTTTAGCCG
AACAAATGGATTGGCTGTTTGTTCTGCTGGTGGTGGGGATTATTTATATCGAGAAACGCAGTCGTCAGTTTGGCCGCTTA
CTCAAATGGGGCCTGTATGCGGCCATGCTGGGGTTAATGCTCTTTAGCTCGGCGGGGAATTTGTGGAATTTCCATCAATC
GAGTAAAACTTCCCGCGAAAAGGTCTCTGCCCCTCAAGATATCAATGCTGTTGTTAAGGCGATTCCAGGTCTTGTCTCCC
TCGGACTCTGTGAAAATACCGATTGTGCCCGTGAACAGATCCATTCTTTGCAACAGACGCTCGACACTCAGACGCTCGAG
AATGTGCCTATGGAGGGAATGTCGGCAGTTGAGCGCCGCGATATGGTATTAGAGACTTTAGCAAGCACGGATTTATCCGA
TGCAGATAAAGCACAGTTACGTGATGAAATTATGGCGGGCAGCCTCTGGCCCGAGGTGAAAGGGCTTGAAGTCACCCTAG
ACTCCACCAAGGGCTTAGCTAAAAATTCAACCAAGGATTCAAGCACATTATCACAGCCGCCACAGCCAAATCAGTCGCTC
GTAAATCAATCGACCGATGGCAAGCTTGACGCAGTTCCCGTATCTGAACCGCAAACCGATGGATTAGCTAACGTTCAAAC
CGATATTCGAGGGGCCATGGAAAACGCTCCCTCAGCTCCAGACGCCAATCTGATTCCTGCGCATAAAACCGAAGGCCGCA
ACAGTGACATCGCCGACGAGGAAGAGAGTGACACCCGCAGTGTGCTGGCGTGGATCAAAGGCTTTATGAGCGATATGGGC
TTAGGCTTTGGCTGGGCTGCATTTTACTTCACCGTGTTTACTGCCAAATTTGATGGTCAGACCTTAGGGAAGAAACTCTT
AGGCATCCGCGTTATCCAACTCGATGGCGCTAAAATCAGCCTTTGGGGGGCATTTGGCCGTTATGGTGGTTATGCGGCGG
GCTTCACGACGGGTTTACTGGGCTTTATGCAGATATTTTGGGATGCCAATCGGCAGGGGATCCAAGATAAAATATCTTCC
ACAGTCGTGATAGACTTAGCGCAAATGCATAAAAAGCAACAAATAGAGCAGCAACAGGCGCAGGCTGAACACGCATTGGC
CGCCGTGCCAACACAGAATAATGCGACGTCTGCTCACCTTACAACAAGCACCCGTTCGGAGCACCTATGA

Upstream 100 bases:

>100_bases
GTTAACCTCTTGCTAACATCAATAAAAAATAACCTGTAAATAAGAATAACCACTTGATGTTTCACTTATAAAACGTCTAT
CGGAATCGGATTGCCACACT

Downstream 100 bases:

>100_bases
AACAGGTCGTTATTTCTGGCAGCGGTTTATTTACGCCGCCACACAGTATTTCTAATGAAGCTTTGGTGGAGAGCTTCAAC
GCCTATGTGGATATGTTTAA

Product: RDD domain-containing protein

Products: NA

Alternate protein names: RDD Domain Containing Protein

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MKQQQTDLGKDPRTMVTPKAFTIAESVLYTPLATPFKRALAMLIDGLFITILAEQMDWLFVLLVVGIIYIEKRSRQFGRL
LKWGLYAAMLGLMLFSSAGNLWNFHQSSKTSREKVSAPQDINAVVKAIPGLVSLGLCENTDCAREQIHSLQQTLDTQTLE
NVPMEGMSAVERRDMVLETLASTDLSDADKAQLRDEIMAGSLWPEVKGLEVTLDSTKGLAKNSTKDSSTLSQPPQPNQSL
VNQSTDGKLDAVPVSEPQTDGLANVQTDIRGAMENAPSAPDANLIPAHKTEGRNSDIADEEESDTRSVLAWIKGFMSDMG
LGFGWAAFYFTVFTAKFDGQTLGKKLLGIRVIQLDGAKISLWGAFGRYGGYAAGFTTGLLGFMQIFWDANRQGIQDKISS
TVVIDLAQMHKKQQIEQQQAQAEHALAAVPTQNNATSAHLTTSTRSEHL

Sequences:

>Translated_449_residues
MKQQQTDLGKDPRTMVTPKAFTIAESVLYTPLATPFKRALAMLIDGLFITILAEQMDWLFVLLVVGIIYIEKRSRQFGRL
LKWGLYAAMLGLMLFSSAGNLWNFHQSSKTSREKVSAPQDINAVVKAIPGLVSLGLCENTDCAREQIHSLQQTLDTQTLE
NVPMEGMSAVERRDMVLETLASTDLSDADKAQLRDEIMAGSLWPEVKGLEVTLDSTKGLAKNSTKDSSTLSQPPQPNQSL
VNQSTDGKLDAVPVSEPQTDGLANVQTDIRGAMENAPSAPDANLIPAHKTEGRNSDIADEEESDTRSVLAWIKGFMSDMG
LGFGWAAFYFTVFTAKFDGQTLGKKLLGIRVIQLDGAKISLWGAFGRYGGYAAGFTTGLLGFMQIFWDANRQGIQDKISS
TVVIDLAQMHKKQQIEQQQAQAEHALAAVPTQNNATSAHLTTSTRSEHL
>Mature_449_residues
MKQQQTDLGKDPRTMVTPKAFTIAESVLYTPLATPFKRALAMLIDGLFITILAEQMDWLFVLLVVGIIYIEKRSRQFGRL
LKWGLYAAMLGLMLFSSAGNLWNFHQSSKTSREKVSAPQDINAVVKAIPGLVSLGLCENTDCAREQIHSLQQTLDTQTLE
NVPMEGMSAVERRDMVLETLASTDLSDADKAQLRDEIMAGSLWPEVKGLEVTLDSTKGLAKNSTKDSSTLSQPPQPNQSL
VNQSTDGKLDAVPVSEPQTDGLANVQTDIRGAMENAPSAPDANLIPAHKTEGRNSDIADEEESDTRSVLAWIKGFMSDMG
LGFGWAAFYFTVFTAKFDGQTLGKKLLGIRVIQLDGAKISLWGAFGRYGGYAAGFTTGLLGFMQIFWDANRQGIQDKISS
TVVIDLAQMHKKQQIEQQQAQAEHALAAVPTQNNATSAHLTTSTRSEHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49100; Mature: 49100

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQQTDLGKDPRTMVTPKAFTIAESVLYTPLATPFKRALAMLIDGLFITILAEQMDWLF
CCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLVVGIIYIEKRSRQFGRLLKWGLYAAMLGLMLFSSAGNLWNFHQSSKTSREKVSAPQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHCCHHHHHCCCCHH
INAVVKAIPGLVSLGLCENTDCAREQIHSLQQTLDTQTLENVPMEGMSAVERRDMVLETL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ASTDLSDADKAQLRDEIMAGSLWPEVKGLEVTLDSTKGLAKNSTKDSSTLSQPPQPNQSL
HHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHH
VNQSTDGKLDAVPVSEPQTDGLANVQTDIRGAMENAPSAPDANLIPAHKTEGRNSDIADE
HCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
EESDTRSVLAWIKGFMSDMGLGFGWAAFYFTVFTAKFDGQTLGKKLLGIRVIQLDGAKIS
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCEEEEEECCCEEE
LWGAFGRYGGYAAGFTTGLLGFMQIFWDANRQGIQDKISSTVVIDLAQMHKKQQIEQQQA
EEECHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEHALAAVPTQNNATSAHLTTSTRSEHL
HHHHHHEECCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MKQQQTDLGKDPRTMVTPKAFTIAESVLYTPLATPFKRALAMLIDGLFITILAEQMDWLF
CCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLVVGIIYIEKRSRQFGRLLKWGLYAAMLGLMLFSSAGNLWNFHQSSKTSREKVSAPQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHCCHHHHHCCCCHH
INAVVKAIPGLVSLGLCENTDCAREQIHSLQQTLDTQTLENVPMEGMSAVERRDMVLETL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ASTDLSDADKAQLRDEIMAGSLWPEVKGLEVTLDSTKGLAKNSTKDSSTLSQPPQPNQSL
HHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHH
VNQSTDGKLDAVPVSEPQTDGLANVQTDIRGAMENAPSAPDANLIPAHKTEGRNSDIADE
HCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
EESDTRSVLAWIKGFMSDMGLGFGWAAFYFTVFTAKFDGQTLGKKLLGIRVIQLDGAKIS
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCEEEEEECCCEEE
LWGAFGRYGGYAAGFTTGLLGFMQIFWDANRQGIQDKISSTVVIDLAQMHKKQQIEQQQA
EEECHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEHALAAVPTQNNATSAHLTTSTRSEHL
HHHHHHEECCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA