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The map label for this gene is yfbV [C]

Identifier: 117920001

GI number: 117920001

Start: 1809984

End: 1810481

Strand: Direct

Name: yfbV [C]

Synonym: Shewana3_1553

Alternate gene names: 117920001

Gene position: 1809984-1810481 (Clockwise)

Preceding gene: 117919998

Following gene: 117920004

Centisome position: 36.4

GC content: 46.99

Gene sequence:

>498_bases
GTGCCAGATTGTGCTATGGTAAAAGCAGTGTTCCTCTGTTGTAGGTGTCTAAAATTGAGTATCAATATTCTCAAAACCTT
AGGTGATGGTCGTCGCTATATGAAGACGTGGCCTATGGTTAGACAACTGGGTTTATATTTTCCTGAGTATCGGGTGGTAC
GCGCCACTCAGCTTGCCATTCTGGTGATGCCAGTGCTGGCGATTTTGGCGAGTGTGAGTCAGATTTATACCTATGGTTGG
GCGTTTTTACCCCAAGCTCTCACAATCGCGTTGTTCTTTATTAGCCTGCCGTTGCAGGGCTTATTGTGGTTAGGCTGGCG
TGCGCGCCATCCATTACCTTTATCGCTGTTCGACTGGAGTAATCAGTTGAGTGCGAAATTGTCTGCCATGGGCATTCATT
GCCAATCCTTGGGCGCTAAGGCGTGTTACCTTGATATGGCGCTCATCTTAAAAATAGCCTTTGAGCGCTTAGATGCCAGT
TATTGGGAGGAGCTTTAA

Upstream 100 bases:

>100_bases
GTTTATTAGACATGTGTAAACCTTTTGCCATTGTGTTTAAGTTAACGATTCAAAATCTTGGGAACGCTTGCGTAATTTGC
CATCACAGTCTTGGGGCGCA

Downstream 100 bases:

>100_bases
GCCTCCCTTGGCGTCTTAATACACCGCATTAATCCCCTGTGAGCTAAACACGGCTTTAATTTTTTCCATTGTGTCGCGAC
TCGGTGGTGCAACGCCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPDCAMVKAVFLCCRCLKLSINILKTLGDGRRYMKTWPMVRQLGLYFPEYRVVRATQLAILVMPVLAILASVSQIYTYGW
AFLPQALTIALFFISLPLQGLLWLGWRARHPLPLSLFDWSNQLSAKLSAMGIHCQSLGAKACYLDMALILKIAFERLDAS
YWEEL

Sequences:

>Translated_165_residues
MPDCAMVKAVFLCCRCLKLSINILKTLGDGRRYMKTWPMVRQLGLYFPEYRVVRATQLAILVMPVLAILASVSQIYTYGW
AFLPQALTIALFFISLPLQGLLWLGWRARHPLPLSLFDWSNQLSAKLSAMGIHCQSLGAKACYLDMALILKIAFERLDAS
YWEEL
>Mature_164_residues
PDCAMVKAVFLCCRCLKLSINILKTLGDGRRYMKTWPMVRQLGLYFPEYRVVRATQLAILVMPVLAILASVSQIYTYGWA
FLPQALTIALFFISLPLQGLLWLGWRARHPLPLSLFDWSNQLSAKLSAMGIHCQSLGAKACYLDMALILKIAFERLDASY
WEEL

Specific function: Unknown

COG id: COG3092

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0208 family [H]

Homologues:

Organism=Escherichia coli, GI1788632, Length=146, Percent_Identity=36.986301369863, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007334 [H]

Pfam domain/function: PF04217 DUF412 [H]

EC number: NA

Molecular weight: Translated: 18777; Mature: 18646

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDCAMVKAVFLCCRCLKLSINILKTLGDGRRYMKTWPMVRQLGLYFPEYRVVRATQLAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LVMPVLAILASVSQIYTYGWAFLPQALTIALFFISLPLQGLLWLGWRARHPLPLSLFDWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC
NQLSAKLSAMGIHCQSLGAKACYLDMALILKIAFERLDASYWEEL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDCAMVKAVFLCCRCLKLSINILKTLGDGRRYMKTWPMVRQLGLYFPEYRVVRATQLAI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LVMPVLAILASVSQIYTYGWAFLPQALTIALFFISLPLQGLLWLGWRARHPLPLSLFDWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC
NQLSAKLSAMGIHCQSLGAKACYLDMALILKIAFERLDASYWEEL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]