| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919974
Identifier: 117919974
GI number: 117919974
Start: 1776417
End: 1777379
Strand: Direct
Name: 117919974
Synonym: Shewana3_1526
Alternate gene names: NA
Gene position: 1776417-1777379 (Clockwise)
Preceding gene: 117919973
Following gene: 117919975
Centisome position: 35.73
GC content: 46.11
Gene sequence:
>963_bases ATGGAGTTAATATCGGTCAAGCGAATTTGGGACCAAGGTGAACACAATGCCTTTACCGATCTCGTCTTATTTCAGGGCGC ATTATTCTGTGTGTTTAGGGAAGGTTCCGCCCATGTTTCTCCCGATGGCGCCTTACGTATTCTCCGTTCTCAAGATGCTG GTGGGACGTGGCAAAGTATGTCGCTGCTTACTTCCACTCGAGCGGATTTGCGCGATGGCAAGTTAATTGAGTTTAGAGGG GAATTATTGTTATTGGGCGGGGGGACTCAGCACGATAAATCAGGTTTACAGTCCTATCTTTGGCGCTCAAAGGATGGCGT ACATTGGTCTGAAGCACAGGAGGTCGCTGATAAAGGTTATTGGTTATGGCGCTTAACTGAGCATCAAGATGCACTCTATG GCGTGGGGTATCGAGCGGGGCCTGATGGGGATACCCGTCTCTATAAAAGTGATGATGGACAGCAGTTCAAGTCTTGGATG TCAGTGTTTAATAATCAAGGCTATGTAAATGAAAGCTCGCTCGTATTTCACCAAGGGAGTTGTTTTTGTTTATTAAGGCG CGATCCCGTGTGGAGTGACGAGTTTTTAGGTTTACTCGGCCATAGTTTACCGCCATTCAATCAATGGGCGTGGCAAACAC TCGATAAACGCATTGGTGGGCCGGTGATGTTTGTTTATCAATCCCATTTGATGGCGGTTGTGCGTCTTTATGAAGGAAGC GTTCGCACAGCACTTATTGAGATAAATAAAGAGACGGGCACAATTCACGAGTGGCTTACTTTACCTTCGCAAGGCGATAC CAGTTATGCTGGAGTTGTGCTCGAAGGGGGTTATCTTTACGTGAGCTATTATTCAAGTCACGAAATGATATCGGTTTCAG ATAAGAGCCAAGTCCATAATGGAGAGGCTCCAGAGAAGCATAAGACGATGATTTACTTTGCGAAGATTAGGTTCAGTGAT TGA
Upstream 100 bases:
>100_bases ATGTTTAGTCTCTCAGTAAAAAGGCCGCATGCGGCCTTTTTTGCTTTCTGCGGCCAGCGGTTATGCTATAACAAACCTAA AGATGACGAGGAGATGAACC
Downstream 100 bases:
>100_bases GCAAAAATAAAGGGAGCGTAGGGCTCCCTTTATTGTCATCCCAAAACCACCGCCTCTGGCGGTGGTGATTGTCCCTTAAG GCTATAGCCTGAATAACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MELISVKRIWDQGEHNAFTDLVLFQGALFCVFREGSAHVSPDGALRILRSQDAGGTWQSMSLLTSTRADLRDGKLIEFRG ELLLLGGGTQHDKSGLQSYLWRSKDGVHWSEAQEVADKGYWLWRLTEHQDALYGVGYRAGPDGDTRLYKSDDGQQFKSWM SVFNNQGYVNESSLVFHQGSCFCLLRRDPVWSDEFLGLLGHSLPPFNQWAWQTLDKRIGGPVMFVYQSHLMAVVRLYEGS VRTALIEINKETGTIHEWLTLPSQGDTSYAGVVLEGGYLYVSYYSSHEMISVSDKSQVHNGEAPEKHKTMIYFAKIRFSD
Sequences:
>Translated_320_residues MELISVKRIWDQGEHNAFTDLVLFQGALFCVFREGSAHVSPDGALRILRSQDAGGTWQSMSLLTSTRADLRDGKLIEFRG ELLLLGGGTQHDKSGLQSYLWRSKDGVHWSEAQEVADKGYWLWRLTEHQDALYGVGYRAGPDGDTRLYKSDDGQQFKSWM SVFNNQGYVNESSLVFHQGSCFCLLRRDPVWSDEFLGLLGHSLPPFNQWAWQTLDKRIGGPVMFVYQSHLMAVVRLYEGS VRTALIEINKETGTIHEWLTLPSQGDTSYAGVVLEGGYLYVSYYSSHEMISVSDKSQVHNGEAPEKHKTMIYFAKIRFSD >Mature_320_residues MELISVKRIWDQGEHNAFTDLVLFQGALFCVFREGSAHVSPDGALRILRSQDAGGTWQSMSLLTSTRADLRDGKLIEFRG ELLLLGGGTQHDKSGLQSYLWRSKDGVHWSEAQEVADKGYWLWRLTEHQDALYGVGYRAGPDGDTRLYKSDDGQQFKSWM SVFNNQGYVNESSLVFHQGSCFCLLRRDPVWSDEFLGLLGHSLPPFNQWAWQTLDKRIGGPVMFVYQSHLMAVVRLYEGS VRTALIEINKETGTIHEWLTLPSQGDTSYAGVVLEGGYLYVSYYSSHEMISVSDKSQVHNGEAPEKHKTMIYFAKIRFSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36264; Mature: 36264
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELISVKRIWDQGEHNAFTDLVLFQGALFCVFREGSAHVSPDGALRILRSQDAGGTWQSM CCCEEHHHHHCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCHHEEEEECCCCCCCHHHH SLLTSTRADLRDGKLIEFRGELLLLGGGTQHDKSGLQSYLWRSKDGVHWSEAQEVADKGY HHHHHHHHHCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCE WLWRLTEHQDALYGVGYRAGPDGDTRLYKSDDGQQFKSWMSVFNNQGYVNESSLVFHQGS EEEEEECCCCCEEECCEECCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCC CFCLLRRDPVWSDEFLGLLGHSLPPFNQWAWQTLDKRIGGPVMFVYQSHLMAVVRLYEGS EEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCC VRTALIEINKETGTIHEWLTLPSQGDTSYAGVVLEGGYLYVSYYSSHEMISVSDKSQVHN EEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCEEEECCCCCCCC GEAPEKHKTMIYFAKIRFSD CCCCCCCCEEEEEEEEEECC >Mature Secondary Structure MELISVKRIWDQGEHNAFTDLVLFQGALFCVFREGSAHVSPDGALRILRSQDAGGTWQSM CCCEEHHHHHCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCHHEEEEECCCCCCCHHHH SLLTSTRADLRDGKLIEFRGELLLLGGGTQHDKSGLQSYLWRSKDGVHWSEAQEVADKGY HHHHHHHHHCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCE WLWRLTEHQDALYGVGYRAGPDGDTRLYKSDDGQQFKSWMSVFNNQGYVNESSLVFHQGS EEEEEECCCCCEEECCEECCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCC CFCLLRRDPVWSDEFLGLLGHSLPPFNQWAWQTLDKRIGGPVMFVYQSHLMAVVRLYEGS EEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCC VRTALIEINKETGTIHEWLTLPSQGDTSYAGVVLEGGYLYVSYYSSHEMISVSDKSQVHN EEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCEEEECCCCCCCC GEAPEKHKTMIYFAKIRFSD CCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA