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The map label for this gene is dedD [H]

Identifier: 117919929

GI number: 117919929

Start: 1724298

End: 1725122

Strand: Direct

Name: dedD [H]

Synonym: Shewana3_1481

Alternate gene names: 117919929

Gene position: 1724298-1725122 (Clockwise)

Preceding gene: 117919928

Following gene: 117919930

Centisome position: 34.68

GC content: 50.42

Gene sequence:

>825_bases
TTGTCTAGCCAGTTTCATAATCGATTAGTCGGCACTGTGGTGCTGGTCGCCCTCGGGGTGATTTTTCTGCCGGATATTTT
AGATGGCAAGAAGGAGCGTCAAGAGGAACAATTTGCCGAAATTCCCCTGCGTCCAGCCGCGATAGCGCAGCAAAACGCCG
ATGATATGTTTGAGGTGTTGTCCACCCAAGATGTGGATGGCGAAGGTGCTTTACCCGAAGAGGCTTCTCCGAATGATGAG
GCGGCGTTAGCGCAGGCGGTCAATACTGATGTCAAAGACGCGCCTGCGGCAAAAGTCGAGCCTAAGTCGGAAGCGGTGAA
AGAGACCGCCAAACCACAGACGGCAAAAGCGGAAACTAAGCCTGAGGTGAAAGCGCCTGCGAAAACCGAGACCGCTAAGG
CCGAACCGAAGAAAGAGACGCCAAAGCCGACTCCAACTAAAACAGAAACCAAAAAGCCAGAAACCAAGCCAACCGTAGTC
GCGAAAACGGACAAGCCTAAAGCCGAAACCGCGAAAACAGAATCTGCAAAACCTGCCAAAGACGATGGCATTAAAGTGGT
CAGCCGCGATTCATTAAAACCTGGACTTACCCTGCAACTAGGCGCATTTAGCAATGCCGCCAACGTAAAAGCGCTGGTGG
CGCAGTTACGTAAAAGTGGTTACAAGGCGTACACAATTCCAGACACGCCTAAGGATGGCGTATTGACGAAAGTGTTTGTG
GGACCCGATGTTTCCGAAGCTAAGCTGAAGAAAATGCAGGAAGAAATTGAAACTCTAACCCGTTTGAAAGGCCGGATTGT
GCCTTTTAATCCCTTGGAATCTTAA

Upstream 100 bases:

>100_bases
GCATTAAAAGCGCAAATTCAGCCCGATGATGTGGTAATTGTGTTTGGCTCCTTTTACACTGTGGCAGGTTTTAAGTCTCT
CTTTAAGCAGGATAACCGTT

Downstream 100 bases:

>100_bases
TGCCATTCAGCAGGGACTGAAATAATTTATTTACCTCGCTAGGGGTGAGAATCGTTTCAGTCTCTGGTAGAATCGCGCCG
TCTTAAAGCCTATGCTGGAA

Product: sporulation domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSSQFHNRLVGTVVLVALGVIFLPDILDGKKERQEEQFAEIPLRPAAIAQQNADDMFEVLSTQDVDGEGALPEEASPNDE
AALAQAVNTDVKDAPAAKVEPKSEAVKETAKPQTAKAETKPEVKAPAKTETAKAEPKKETPKPTPTKTETKKPETKPTVV
AKTDKPKAETAKTESAKPAKDDGIKVVSRDSLKPGLTLQLGAFSNAANVKALVAQLRKSGYKAYTIPDTPKDGVLTKVFV
GPDVSEAKLKKMQEEIETLTRLKGRIVPFNPLES

Sequences:

>Translated_274_residues
MSSQFHNRLVGTVVLVALGVIFLPDILDGKKERQEEQFAEIPLRPAAIAQQNADDMFEVLSTQDVDGEGALPEEASPNDE
AALAQAVNTDVKDAPAAKVEPKSEAVKETAKPQTAKAETKPEVKAPAKTETAKAEPKKETPKPTPTKTETKKPETKPTVV
AKTDKPKAETAKTESAKPAKDDGIKVVSRDSLKPGLTLQLGAFSNAANVKALVAQLRKSGYKAYTIPDTPKDGVLTKVFV
GPDVSEAKLKKMQEEIETLTRLKGRIVPFNPLES
>Mature_273_residues
SSQFHNRLVGTVVLVALGVIFLPDILDGKKERQEEQFAEIPLRPAAIAQQNADDMFEVLSTQDVDGEGALPEEASPNDEA
ALAQAVNTDVKDAPAAKVEPKSEAVKETAKPQTAKAETKPEVKAPAKTETAKAEPKKETPKPTPTKTETKKPETKPTVVA
KTDKPKAETAKTESAKPAKDDGIKVVSRDSLKPGLTLQLGAFSNAANVKALVAQLRKSGYKAYTIPDTPKDGVLTKVFVG
PDVSEAKLKKMQEEIETLTRLKGRIVPFNPLES

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082083, Length=75, Percent_Identity=42.6666666666667, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 29443; Mature: 29312

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQFHNRLVGTVVLVALGVIFLPDILDGKKERQEEQFAEIPLRPAAIAQQNADDMFEVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHH
STQDVDGEGALPEEASPNDEAALAQAVNTDVKDAPAAKVEPKSEAVKETAKPQTAKAETK
HHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
PEVKAPAKTETAKAEPKKETPKPTPTKTETKKPETKPTVVAKTDKPKAETAKTESAKPAK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCCCC
DDGIKVVSRDSLKPGLTLQLGAFSNAANVKALVAQLRKSGYKAYTIPDTPKDGVLTKVFV
CCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEE
GPDVSEAKLKKMQEEIETLTRLKGRIVPFNPLES
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SSQFHNRLVGTVVLVALGVIFLPDILDGKKERQEEQFAEIPLRPAAIAQQNADDMFEVL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHH
STQDVDGEGALPEEASPNDEAALAQAVNTDVKDAPAAKVEPKSEAVKETAKPQTAKAETK
HHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
PEVKAPAKTETAKAEPKKETPKPTPTKTETKKPETKPTVVAKTDKPKAETAKTESAKPAK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCCCC
DDGIKVVSRDSLKPGLTLQLGAFSNAANVKALVAQLRKSGYKAYTIPDTPKDGVLTKVFV
CCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEE
GPDVSEAKLKKMQEEIETLTRLKGRIVPFNPLES
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3040734; 9205837; 9278503 [H]