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The map label for this gene is 117919921

Identifier: 117919921

GI number: 117919921

Start: 1711704

End: 1712312

Strand: Direct

Name: 117919921

Synonym: Shewana3_1473

Alternate gene names: NA

Gene position: 1711704-1712312 (Clockwise)

Preceding gene: 117919920

Following gene: 117919923

Centisome position: 34.43

GC content: 53.53

Gene sequence:

>609_bases
ATGAGTTCATCCACGACTACTTCGGTTGATGCCATGGCAAAACCTGAAGTGCAGCAAGCGGTTTATATCGGTCTAGTCAA
TCCGAAAACCCCGACCAATGTGGGCGGCATTATGCGCGCTTCGGGCTGTTATGGTGTCGATGCCGTGTTCTACACTGGCA
AACGCTATGAGTATGCTGCCCGTGGGCCGCAGCAGTATAACGCCGATACGCAGAGCGCCGCCGAGCGCATTCCGTTAACT
GGAGTGGCCTCCTTACTCGATGCGCTCCCCTCTGACACTAAGCTGGTGTGCGTGGATTTAGTTCTAGGGGCGACACCCTT
GCCTGAGTTTGTGCATCCCGAGAAAGCCTTTTATGTGTTTGGCCCAGAGGATGGCACCATTGGCCAAGAGATTATCGATA
GAGCCGATGCCGTAGTGTATGTACCTACGGTAGGCTGTATGAATCTGGCGGCCTCGGTCAATGTGCTACTTTACGATAGA
TTGGCGAAAGCCCATCGCGAGCAGGTATCTGCTCAGACCGAGTTCGATGGCGATGCCTTGATCCGCCAAAGTCGCGACAA
CAATAATCGCACCCGAGTAAAAACCACTAAGCAGGGTTCTTCGCTCTAG

Upstream 100 bases:

>100_bases
CCTAGCGCGCCAAGAATTAAATGATGCCGATTTTGCCTTAGTAGAAGCGGCGTGGGCACAATTACATGGCAAGATTGTTA
GTCATTTAGCGGCATAATTG

Downstream 100 bases:

>100_bases
GGTTAACGCTCAATGCTCAGTCGAAATACAAAAAAGGATTAAGCACTGCTTAATCCTTTTTTGTTTTGGGCTGCCAATTT
TTGGGGCGTTAAGATGCAAG

Product: tRNA/rRNA methyltransferase (SpoU)

Products: NA

Alternate protein names: RNA Methyltransferase; 23S RRNA Methyltransferase; RNA Methyltransferase TrmH Family; Cold-Shock RNA Methyltransferase; rRNA Methylase; TrmH Family RNA Methyltransferase; TRNA/RRNA MethyltransferaU; rRNA Methyltransferase; SpoU Class RRNA Methylase

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSSSTTTSVDAMAKPEVQQAVYIGLVNPKTPTNVGGIMRASGCYGVDAVFYTGKRYEYAARGPQQYNADTQSAAERIPLT
GVASLLDALPSDTKLVCVDLVLGATPLPEFVHPEKAFYVFGPEDGTIGQEIIDRADAVVYVPTVGCMNLAASVNVLLYDR
LAKAHREQVSAQTEFDGDALIRQSRDNNNRTRVKTTKQGSSL

Sequences:

>Translated_202_residues
MSSSTTTSVDAMAKPEVQQAVYIGLVNPKTPTNVGGIMRASGCYGVDAVFYTGKRYEYAARGPQQYNADTQSAAERIPLT
GVASLLDALPSDTKLVCVDLVLGATPLPEFVHPEKAFYVFGPEDGTIGQEIIDRADAVVYVPTVGCMNLAASVNVLLYDR
LAKAHREQVSAQTEFDGDALIRQSRDNNNRTRVKTTKQGSSL
>Mature_201_residues
SSSTTTSVDAMAKPEVQQAVYIGLVNPKTPTNVGGIMRASGCYGVDAVFYTGKRYEYAARGPQQYNADTQSAAERIPLTG
VASLLDALPSDTKLVCVDLVLGATPLPEFVHPEKAFYVFGPEDGTIGQEIIDRADAVVYVPTVGCMNLAASVNVLLYDRL
AKAHREQVSAQTEFDGDALIRQSRDNNNRTRVKTTKQGSSL

Specific function: Unknown

COG id: COG0219

COG function: function code J; Predicted rRNA methylase (SpoU class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21736; Mature: 21605

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSTTTSVDAMAKPEVQQAVYIGLVNPKTPTNVGGIMRASGCYGVDAVFYTGKRYEYAA
CCCCCCCCHHHHCCCCHHCEEEEEEECCCCCCCCCCCEECCCCCCCEEEEECCCCEEECC
RGPQQYNADTQSAAERIPLTGVASLLDALPSDTKLVCVDLVLGATPLPEFVHPEKAFYVF
CCCHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCHHCCCCCEEEEE
GPEDGTIGQEIIDRADAVVYVPTVGCMNLAASVNVLLYDRLAKAHREQVSAQTEFDGDAL
CCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
IRQSRDNNNRTRVKTTKQGSSL
HHCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
SSSTTTSVDAMAKPEVQQAVYIGLVNPKTPTNVGGIMRASGCYGVDAVFYTGKRYEYAA
CCCCCCCHHHHCCCCHHCEEEEEEECCCCCCCCCCCEECCCCCCCEEEEECCCCEEECC
RGPQQYNADTQSAAERIPLTGVASLLDALPSDTKLVCVDLVLGATPLPEFVHPEKAFYVF
CCCHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCHHCCCCCEEEEE
GPEDGTIGQEIIDRADAVVYVPTVGCMNLAASVNVLLYDRLAKAHREQVSAQTEFDGDAL
CCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
IRQSRDNNNRTRVKTTKQGSSL
HHCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA