Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is hnr [H]
Identifier: 117919820
GI number: 117919820
Start: 1584530
End: 1585633
Strand: Direct
Name: hnr [H]
Synonym: Shewana3_1372
Alternate gene names: 117919820
Gene position: 1584530-1585633 (Clockwise)
Preceding gene: 117919819
Following gene: 117919822
Centisome position: 31.87
GC content: 45.02
Gene sequence:
>1104_bases ATGGCGTTAAATGATGTTTCTATTCTTTGGGTCGAAGACGACCCGGTCTTTAGGCAAATCGTCGCCACTTTTCTGATTGG GCGCGGTGCCAAAGTAGTGCAGGCCTGCGATGGTGAGCAGGGACTGTATATTTTTAAGCAACAACGTTTCGATATTATTC TTGCCGATCTCAGCATGCCTAAACTCGGTGGACTCGATATGCTCAAGGAAATGAGTAAATTAGAGCCGCTGGTGCCTTCA ATTGTGGTCTCTGGTAATAACGTAATGGCGGATGTCGTTGAAGCCCTGCGTGTTGGTGCCTGTGATTATCTCGTTAAACC CGTCCCCGATTTATTTATCATCGAACAAGCCATAAAACAGGGGTTGCAACGACACCATTCCGATGATGTGACTCAAGCAG AGTTTGATGCTTTATCTAATCAAGAACTCAAGGATAACTTGGTTCTGTTAGAACAAAGTGTTGAGGCGGCTAAGCAAGTT CAGCAGCAGCTGTTTCCTGCCTCTAACATTAGCTATCCCACGGCCAAAGTGGATTACAGTCTGTTTAAGAGTAGCGATAT AAGCAGTTACTTTATTGATTCCACTATGGTGGGCAGTGACTACCTCATTATGTACATGGCCCATCTCTATCCCGAAGACA ATAGAGCGGCTTTTGCCTGTGTGTTGCTGCGCAGTTTTGTTAACCAAAAGCTCAAAAGTTATCGTAGCGGCCAAAGTAAG ACCATTATCGAGCCCTTCAATATGTTGAGTTATTTGAACGAACGTTTAGTCAAATCTGGCCTCGATATTACAGTCGATAT TATTTATGTCGCTATCGAATTAACACGCTATCGCGCCGCGATTGCGCAAGCAGGTAAGGGTCTTAGGTGCTATTTGCGTA ATGATGAAGGTTTGAGTCCATTAGCGCTTTCTGAGAGCTTGCAATTGGGGATGTTAGATTGGGGCAAGCCGAGCATTCAG TTTCGCACTATATTGCCGCAGGAGCAGCTTTGTATCGCAACCAGTGAGCCAGAACACAAGCAGCAACTTTTAGAAAACCA ATTTAAAGGCCTTGTATATGATCCGCAGTTACCCGCGGGTGGCTTTCTGCAATTAAGCCTATAA
Upstream 100 bases:
>100_bases TAAATCCTTTTTTGCAGCCAAGCCCTTGCCGTATTGAATGATTCTTCCGATGTCATGATTGAGTTATTGCTATCGCAATG AATGTTATTCGGGAATCTTT
Downstream 100 bases:
>100_bases CTGTGGCCCAGTTCACTATGCCACTACAGTGACTTTGTGCGTACCTATGATAACGAATATGAAGGTTGGCGATATCGACT TTTAATCTAAAATGTTATCG
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MALNDVSILWVEDDPVFRQIVATFLIGRGAKVVQACDGEQGLYIFKQQRFDIILADLSMPKLGGLDMLKEMSKLEPLVPS IVVSGNNVMADVVEALRVGACDYLVKPVPDLFIIEQAIKQGLQRHHSDDVTQAEFDALSNQELKDNLVLLEQSVEAAKQV QQQLFPASNISYPTAKVDYSLFKSSDISSYFIDSTMVGSDYLIMYMAHLYPEDNRAAFACVLLRSFVNQKLKSYRSGQSK TIIEPFNMLSYLNERLVKSGLDITVDIIYVAIELTRYRAAIAQAGKGLRCYLRNDEGLSPLALSESLQLGMLDWGKPSIQ FRTILPQEQLCIATSEPEHKQQLLENQFKGLVYDPQLPAGGFLQLSL
Sequences:
>Translated_367_residues MALNDVSILWVEDDPVFRQIVATFLIGRGAKVVQACDGEQGLYIFKQQRFDIILADLSMPKLGGLDMLKEMSKLEPLVPS IVVSGNNVMADVVEALRVGACDYLVKPVPDLFIIEQAIKQGLQRHHSDDVTQAEFDALSNQELKDNLVLLEQSVEAAKQV QQQLFPASNISYPTAKVDYSLFKSSDISSYFIDSTMVGSDYLIMYMAHLYPEDNRAAFACVLLRSFVNQKLKSYRSGQSK TIIEPFNMLSYLNERLVKSGLDITVDIIYVAIELTRYRAAIAQAGKGLRCYLRNDEGLSPLALSESLQLGMLDWGKPSIQ FRTILPQEQLCIATSEPEHKQQLLENQFKGLVYDPQLPAGGFLQLSL >Mature_366_residues ALNDVSILWVEDDPVFRQIVATFLIGRGAKVVQACDGEQGLYIFKQQRFDIILADLSMPKLGGLDMLKEMSKLEPLVPSI VVSGNNVMADVVEALRVGACDYLVKPVPDLFIIEQAIKQGLQRHHSDDVTQAEFDALSNQELKDNLVLLEQSVEAAKQVQ QQLFPASNISYPTAKVDYSLFKSSDISSYFIDSTMVGSDYLIMYMAHLYPEDNRAAFACVLLRSFVNQKLKSYRSGQSKT IIEPFNMLSYLNERLVKSGLDITVDIIYVAIELTRYRAAIAQAGKGLRCYLRNDEGLSPLALSESLQLGMLDWGKPSIQF RTILPQEQLCIATSEPEHKQQLLENQFKGLVYDPQLPAGGFLQLSL
Specific function: Member Of The Two-Component Regulatory System Zras/Zrar. When Activated By Zras It Acts In Conjunction With Sigma-54 To Regulate The Expression Of Zrap. Positively Autoregulates The Expression Of The Zrasr Operon. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790437, Length=140, Percent_Identity=33.5714285714286, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1787487, Length=207, Percent_Identity=27.0531400966184, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788905, Length=124, Percent_Identity=29.8387096774194, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=33.6206896551724, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI1790299, Length=113, Percent_Identity=30.9734513274336, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 41041; Mature: 40910
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNDVSILWVEDDPVFRQIVATFLIGRGAKVVQACDGEQGLYIFKQQRFDIILADLSMP CCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCEEEEEECCCC KLGGLDMLKEMSKLEPLVPSIVVSGNNVMADVVEALRVGACDYLVKPVPDLFIIEQAIKQ CCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHH GLQRHHSDDVTQAEFDALSNQELKDNLVLLEQSVEAAKQVQQQLFPASNISYPTAKVDYS HHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LFKSSDISSYFIDSTMVGSDYLIMYMAHLYPEDNRAAFACVLLRSFVNQKLKSYRSGQSK HHCCCCCCHHHHCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC TIIEPFNMLSYLNERLVKSGLDITVDIIYVAIELTRYRAAIAQAGKGLRCYLRNDEGLSP EEECHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC LALSESLQLGMLDWGKPSIQFRTILPQEQLCIATSEPEHKQQLLENQFKGLVYDPQLPAG HHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHCCEEECCCCCCC GFLQLSL CEEEEEC >Mature Secondary Structure ALNDVSILWVEDDPVFRQIVATFLIGRGAKVVQACDGEQGLYIFKQQRFDIILADLSMP CCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCEEEEEECCCC KLGGLDMLKEMSKLEPLVPSIVVSGNNVMADVVEALRVGACDYLVKPVPDLFIIEQAIKQ CCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHH GLQRHHSDDVTQAEFDALSNQELKDNLVLLEQSVEAAKQVQQQLFPASNISYPTAKVDYS HHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LFKSSDISSYFIDSTMVGSDYLIMYMAHLYPEDNRAAFACVLLRSFVNQKLKSYRSGQSK HHCCCCCCHHHHCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC TIIEPFNMLSYLNERLVKSGLDITVDIIYVAIELTRYRAAIAQAGKGLRCYLRNDEGLSP EEECHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC LALSESLQLGMLDWGKPSIQFRTILPQEQLCIATSEPEHKQQLLENQFKGLVYDPQLPAG HHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHCCEEECCCCCCC GFLQLSL CEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]