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The map label for this gene is fliM [H]

Identifier: 117919797

GI number: 117919797

Start: 1562900

End: 1563931

Strand: Direct

Name: fliM [H]

Synonym: Shewana3_1349

Alternate gene names: 117919797

Gene position: 1562900-1563931 (Clockwise)

Preceding gene: 117919796

Following gene: 117919798

Centisome position: 31.43

GC content: 48.45

Gene sequence:

>1032_bases
GTGAGTGATTTATTAAGCCAGGACGAAATTGATGCGCTCTTACACGGAGTCGATGACGTCGAAGAGGATAATGAGCTTGA
TGCCGCGGGGCTGGAAGCTCGCTCCTACGACTTTTCCTCCCAAGACCGCATCGTGCGTGGCCGTATGCCCACGCTCGAAA
TTGTGAATGAGCGTTTTGCCCGCCATCTGCGGATCAGCATGTTCAACATGATGCGTCGTGCAGCCGAAGTGTCGATTAAC
GGCGTGCAAATGCTGAAATTTGGTGAGTACGTACACACCTTATTCGTCCCGACCAGCTTGAACATGGTGCGCTTTCATCC
CTTAAAAGGTACGGCACTGATCACCATGGAAGCGCGTTTAGTGTTTATTCTGGTGGACAACTTTTTTGGCGGCGATGGCC
GTTTCCATGCCAAGATTGAAGGGCGGGAGTTTACCCCGACCGAGCGTCGCATCGTGCAACTTTTGCTTAAGATTATCTTT
GAAGACTATAAAGATGCGTGGGCGCCGGTGATGGATGTGGAGTTTGATTATTTAGACTCCGAAGTCAACCCCGCGATGGC
CAACATCGTCAGTCCAACTGAAGTGGTGGTGATTAACTCCTTCCATATCGAGGTGGATGGCGGCGGCGGTGACTTCCATA
TCACTATGCCGTATTCGATGATTGAACCTATCCGTGAACTACTTGATGCCGGTGTGCAGAGTGATAAACAAGACACTGAC
ATGCGTTGGTCACAGGCGCTGCATGACGAAATTATGGATGTGAAAGTCGGGTTTGATGCCAGTGTGGTTGAACATGAACT
CACACTCAAAGACGTCATGAACTTCAAGGCCGGGGATATTATTCCAATCGAGCTGCCTGAATACATTATGATGAAAATCG
AAGACTTACCGACGTATCGCTGTAAAATGGGGCGTTCACGCGATAATCTAGCACTTAAAATTTACGAAAAAATCCCACGT
CCTGAAACGGTCAAATCCGAACTGCAATTAGTGACACGTAAAGGCAAAGCCAGAGACATATCCGAATTATAA

Upstream 100 bases:

>100_bases
TCCGTGACCGGACGTAAAGTGGTTGAGAAAGTACTCTTTACCGGTTTTGTAATGCAATAACCTTTTATCTTCAGCACCTT
AAAGAGGCGAAGACAATACT

Downstream 100 bases:

>100_bases
AGGTGAAGTGAGATGAGTACAGATGATGATTGGGCAGCAGCCATGGCCGAACAGGCATTGGAAGAGGCTAATGCCATTGA
CCTTGACGAGCTTGTAGACG

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSDLLSQDEIDALLHGVDDVEEDNELDAAGLEARSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSIN
GVQMLKFGEYVHTLFVPTSLNMVRFHPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIF
EDYKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTD
MRWSQALHDEIMDVKVGFDASVVEHELTLKDVMNFKAGDIIPIELPEYIMMKIEDLPTYRCKMGRSRDNLALKIYEKIPR
PETVKSELQLVTRKGKARDISEL

Sequences:

>Translated_343_residues
MSDLLSQDEIDALLHGVDDVEEDNELDAAGLEARSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSIN
GVQMLKFGEYVHTLFVPTSLNMVRFHPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIF
EDYKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTD
MRWSQALHDEIMDVKVGFDASVVEHELTLKDVMNFKAGDIIPIELPEYIMMKIEDLPTYRCKMGRSRDNLALKIYEKIPR
PETVKSELQLVTRKGKARDISEL
>Mature_342_residues
SDLLSQDEIDALLHGVDDVEEDNELDAAGLEARSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSING
VQMLKFGEYVHTLFVPTSLNMVRFHPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFE
DYKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDM
RWSQALHDEIMDVKVGFDASVVEHELTLKDVMNFKAGDIIPIELPEYIMMKIEDLPTYRCKMGRSRDNLALKIYEKIPRP
ETVKSELQLVTRKGKARDISEL

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=313, Percent_Identity=38.9776357827476, Blast_Score=255, Evalue=3e-69,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 39221; Mature: 39089

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLLSQDEIDALLHGVDDVEEDNELDAAGLEARSYDFSSQDRIVRGRMPTLEIVNERFA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHH
RHLRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFHPLKGTALITMEARL
HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHEEEEEECCCCCEEEEECCCCEEEEEEECEE
VFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLDS
EEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCC
EVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTD
CCCHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCHH
MRWSQALHDEIMDVKVGFDASVVEHELTLKDVMNFKAGDIIPIELPEYIMMKIEDLPTYR
HHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCHH
CKMGRSRDNLALKIYEKIPRPETVKSELQLVTRKGKARDISEL
HHCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SDLLSQDEIDALLHGVDDVEEDNELDAAGLEARSYDFSSQDRIVRGRMPTLEIVNERFA
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHH
RHLRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFHPLKGTALITMEARL
HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHEEEEEECCCCCEEEEECCCCEEEEEEECEE
VFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLDS
EEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCC
EVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTD
CCCHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCHH
MRWSQALHDEIMDVKVGFDASVVEHELTLKDVMNFKAGDIIPIELPEYIMMKIEDLPTYR
HHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCHH
CKMGRSRDNLALKIYEKIPRPETVKSELQLVTRKGKARDISEL
HHCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]