Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is yeeI [C]
Identifier: 117919660
GI number: 117919660
Start: 1415301
End: 1416125
Strand: Reverse
Name: yeeI [C]
Synonym: Shewana3_1211
Alternate gene names: 117919660
Gene position: 1416125-1415301 (Counterclockwise)
Preceding gene: 117919661
Following gene: 117919659
Centisome position: 28.48
GC content: 50.67
Gene sequence:
>825_bases ATGCTCGCAGTTTTCATTACCCTAACGCTTGGCCTCGGTGCGATCGCTTGGTTAGCGTCGAGCCGCTGGCGCAAGACGCT CCACCGCAAGCGCGTAATGGCCAGCGCCTTTCCTAAGGCTTGGCGAACAATTTTGAAGAAAAGATTGCCTTATTTCCACG CCTTGCCAGCGGATCTTCAGCTGCAACTCAAACGCCATATCCAAGTCTTTTTGGATGAGAAACGATTCGTCGGCTGCGAC GGTTTGCAAATAACCGACGAAATTCGCGTCACCATCGCCGCCCAAGCATGCTTGCTTCTGCTAAACCGCAATACCGATTT TTACCCCAATCTAAGGCAGATATTGGTCTATCCCGATGCTTTTATTGTCGATAGCCAACACCAAGATCCCGCGGGTTTGA TCTGGGAGCAACGCAATGTGCTGGCAGGGGAATCCTGGGAGCAAGGCCAAGTGATACTGTCGTGGAAGAATACTTTAGAG GGCGCTGCCAATCCCCACGATGGCAACAACGTGGTGATCCACGAGTTTGCCCATCAATTAGATCAAGAAGATGGCCACGC CAATGGCGCGCCGATTTTACAGCGCCGCCAAGATTATCTGTCGTGGTCGAGCGTATTTAGTCAGGCCTTTAATGAGTTAG TTCAAGCTGCCGCCCTTGGCCGCCCGTCCCTGTTTAATTACTATGGTGCCACCAATCCAGCAGAATTTTTTGCCGTAGTG ACTGAGGTCTTTTTTGAAAAGCCAGAAGCACTTAATCTAGAGCATCCAGCCCTTTACCGCGAGTTGAGCCATTTTTATCA ACTCGATCCGATAAACTGGCATTGA
Upstream 100 bases:
>100_bases GCACATCCTAGAGCGTTTTATTTTTAGCCAAAGCATTGAGTTAGCCTCGCTGAATCCCCATTAGCTAATATACCTAAGGA AATAGTGCACTGAGGAATTC
Downstream 100 bases:
>100_bases TCTAATTAGCATCTGTTCTAGAAACCATCAGACCGAATAACCATAACGATAAGGAATCCACGATGACAATTTTCACTCGC ACGGAGCGTAGCTCCAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLAVFITLTLGLGAIAWLASSRWRKTLHRKRVMASAFPKAWRTILKKRLPYFHALPADLQLQLKRHIQVFLDEKRFVGCD GLQITDEIRVTIAAQACLLLLNRNTDFYPNLRQILVYPDAFIVDSQHQDPAGLIWEQRNVLAGESWEQGQVILSWKNTLE GAANPHDGNNVVIHEFAHQLDQEDGHANGAPILQRRQDYLSWSSVFSQAFNELVQAAALGRPSLFNYYGATNPAEFFAVV TEVFFEKPEALNLEHPALYRELSHFYQLDPINWH
Sequences:
>Translated_274_residues MLAVFITLTLGLGAIAWLASSRWRKTLHRKRVMASAFPKAWRTILKKRLPYFHALPADLQLQLKRHIQVFLDEKRFVGCD GLQITDEIRVTIAAQACLLLLNRNTDFYPNLRQILVYPDAFIVDSQHQDPAGLIWEQRNVLAGESWEQGQVILSWKNTLE GAANPHDGNNVVIHEFAHQLDQEDGHANGAPILQRRQDYLSWSSVFSQAFNELVQAAALGRPSLFNYYGATNPAEFFAVV TEVFFEKPEALNLEHPALYRELSHFYQLDPINWH >Mature_274_residues MLAVFITLTLGLGAIAWLASSRWRKTLHRKRVMASAFPKAWRTILKKRLPYFHALPADLQLQLKRHIQVFLDEKRFVGCD GLQITDEIRVTIAAQACLLLLNRNTDFYPNLRQILVYPDAFIVDSQHQDPAGLIWEQRNVLAGESWEQGQVILSWKNTLE GAANPHDGNNVVIHEFAHQLDQEDGHANGAPILQRRQDYLSWSSVFSQAFNELVQAAALGRPSLFNYYGATNPAEFFAVV TEVFFEKPEALNLEHPALYRELSHFYQLDPINWH
Specific function: Unknown
COG id: COG3228
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mtfA family [H]
Homologues:
Organism=Escherichia coli, GI87082014, Length=246, Percent_Identity=31.7073170731707, Blast_Score=121, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010384 [H]
Pfam domain/function: PF06167 DUF980 [H]
EC number: NA
Molecular weight: Translated: 31387; Mature: 31387
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVFITLTLGLGAIAWLASSRWRKTLHRKRVMASAFPKAWRTILKKRLPYFHALPADLQ CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH LQLKRHIQVFLDEKRFVGCDGLQITDEIRVTIAAQACLLLLNRNTDFYPNLRQILVYPDA HHHHHHHHHHHCCCCEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCE FIVDSQHQDPAGLIWEQRNVLAGESWEQGQVILSWKNTLEGAANPHDGNNVVIHEFAHQL EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHCCCCCCCCCCCCEEHHHHHHHH DQEDGHANGAPILQRRQDYLSWSSVFSQAFNELVQAAALGRPSLFNYYGATNPAEFFAVV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHH TEVFFEKPEALNLEHPALYRELSHFYQLDPINWH HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLAVFITLTLGLGAIAWLASSRWRKTLHRKRVMASAFPKAWRTILKKRLPYFHALPADLQ CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH LQLKRHIQVFLDEKRFVGCDGLQITDEIRVTIAAQACLLLLNRNTDFYPNLRQILVYPDA HHHHHHHHHHHCCCCEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCE FIVDSQHQDPAGLIWEQRNVLAGESWEQGQVILSWKNTLEGAANPHDGNNVVIHEFAHQL EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHCCCCCCCCCCCCEEHHHHHHHH DQEDGHANGAPILQRRQDYLSWSSVFSQAFNELVQAAALGRPSLFNYYGATNPAEFFAVV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHH TEVFFEKPEALNLEHPALYRELSHFYQLDPINWH HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]