Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919651
Identifier: 117919651
GI number: 117919651
Start: 1407526
End: 1407840
Strand: Reverse
Name: 117919651
Synonym: Shewana3_1202
Alternate gene names: NA
Gene position: 1407840-1407526 (Counterclockwise)
Preceding gene: 117919654
Following gene: 117919650
Centisome position: 28.31
GC content: 47.94
Gene sequence:
>315_bases ATGTACTGGTTCATTAGCGCATTGATTGTGGCATCGGCGATTTTCTGGTTCGCACCGCAAAAAGTCTCTGCTGATACCCA TAACAGTAAGCTCACACCTCATCTCCCCATGATGTTGCTGTTTTTACCTTTAGTCGTATTGAGTTGGCTCGTGTTTGAGA CTGTGTCGAACGGGGTGAATTACACCACGGTTGCCGCCTTTGGGTTTGTTGCCACCGCTTGCTTAATCGCCCTCCCTAAA TTGCATCGTTTTATCATGCCCTGCGCCCTACTCACCGCATTGGCATTAATCGCTATGGTATTGCAGCATCTCTAA
Upstream 100 bases:
>100_bases AACTCAATATGATGAAAAAGCAGTGTGTTATTCAGCTTGACTTCAGCAATCGCTTTAAATGATAATGATTATCACTTAAA GCGATTAAGGGATAACTAAC
Downstream 100 bases:
>100_bases GTCTGCTTTTTAAACATGCTACTTCCCTGCAAAGAGCTAGCATTGACCTTCGGCCACTTTCAGTCTCTGTCAGTGGCCTT TTTTTACCTCCCCGAAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MYWFISALIVASAIFWFAPQKVSADTHNSKLTPHLPMMLLFLPLVVLSWLVFETVSNGVNYTTVAAFGFVATACLIALPK LHRFIMPCALLTALALIAMVLQHL
Sequences:
>Translated_104_residues MYWFISALIVASAIFWFAPQKVSADTHNSKLTPHLPMMLLFLPLVVLSWLVFETVSNGVNYTTVAAFGFVATACLIALPK LHRFIMPCALLTALALIAMVLQHL >Mature_104_residues MYWFISALIVASAIFWFAPQKVSADTHNSKLTPHLPMMLLFLPLVVLSWLVFETVSNGVNYTTVAAFGFVATACLIALPK LHRFIMPCALLTALALIAMVLQHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11504; Mature: 11504
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYWFISALIVASAIFWFAPQKVSADTHNSKLTPHLPMMLLFLPLVVLSWLVFETVSNGVN CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC YTTVAAFGFVATACLIALPKLHRFIMPCALLTALALIAMVLQHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MYWFISALIVASAIFWFAPQKVSADTHNSKLTPHLPMMLLFLPLVVLSWLVFETVSNGVN CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC YTTVAAFGFVATACLIALPKLHRFIMPCALLTALALIAMVLQHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA