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The map label for this gene is yggV [C]

Identifier: 117919638

GI number: 117919638

Start: 1397981

End: 1398598

Strand: Reverse

Name: yggV [C]

Synonym: Shewana3_1189

Alternate gene names: 117919638

Gene position: 1398598-1397981 (Counterclockwise)

Preceding gene: 117919639

Following gene: 117919637

Centisome position: 28.13

GC content: 50.16

Gene sequence:

>618_bases
ATGCAACAAATCGTCCTCGCCAGTGGCAATAAAGGTAAACTTGCCGAATTCGATCAAATGCTCGCCGCCTATGGCGTAAA
AGTGCTGCCACAAAGCCAATTTAACGTTAGCGAAGTGGCTGAAACGGGCACCACCTTTGTCGAAAACGCCATTATCAAAG
CCAGACATGCGGCGCAAATTACCGGACTTGCCGCCATTGCCGATGACTCGGGATTAGAAGTCGATTTACTCCAAGGTGCA
CCGGGCATCTACTCTGCGCGCTATGCGGGGGAAAATGCCAAGGATCAAGACAATGTGTTAAAACTCTTAGACACATTAAA
GGATAATCCTGCGCCGCGTACGGCCAGATTCCAATGCGTTTTAGTCTATATGCGCCATGCGAAGGACCCAACGCCCATCA
TTTGCCAAGCCTCTTGGGAAGGCCAGATCGATTTCGTGCAACGGGGTGACAACGGCCATGGTTACGATCCGATTTTTATT
CCAGAGCACCACGATTGCAGCGCCGCGCAAATGAGCAGTGACGAAAAAAATGCCTTGAGTCACCGTGGTAAAGCTTTAGT
GCAACTGATTGCTGCCATGCAGGAAAAAGGCGTATTTACCGACGGGAACGCCCAATAA

Upstream 100 bases:

>100_bases
GCCAAGCTTGGGTATCATTGCCGCATACAGTCCAATGACATCGCTCAATGTTCACACTCAGTGACATACAGCCAAGAGCG
CCCAATCCAATAGGTATTCC

Downstream 100 bases:

>100_bases
TGTCAGTGAATGTGTCACCTCAGTTAACCCTGCCGCCGTTGAGCCTGTACATCCATATCCCTTGGTGTGTACAAAAATGC
CCTTACTGCGACTTTAACTC

Product: putative deoxyribonucleotide triphosphate pyrophosphatase

Products: NA

Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MQQIVLASGNKGKLAEFDQMLAAYGVKVLPQSQFNVSEVAETGTTFVENAIIKARHAAQITGLAAIADDSGLEVDLLQGA
PGIYSARYAGENAKDQDNVLKLLDTLKDNPAPRTARFQCVLVYMRHAKDPTPIICQASWEGQIDFVQRGDNGHGYDPIFI
PEHHDCSAAQMSSDEKNALSHRGKALVQLIAAMQEKGVFTDGNAQ

Sequences:

>Translated_205_residues
MQQIVLASGNKGKLAEFDQMLAAYGVKVLPQSQFNVSEVAETGTTFVENAIIKARHAAQITGLAAIADDSGLEVDLLQGA
PGIYSARYAGENAKDQDNVLKLLDTLKDNPAPRTARFQCVLVYMRHAKDPTPIICQASWEGQIDFVQRGDNGHGYDPIFI
PEHHDCSAAQMSSDEKNALSHRGKALVQLIAAMQEKGVFTDGNAQ
>Mature_205_residues
MQQIVLASGNKGKLAEFDQMLAAYGVKVLPQSQFNVSEVAETGTTFVENAIIKARHAAQITGLAAIADDSGLEVDLLQGA
PGIYSARYAGENAKDQDNVLKLLDTLKDNPAPRTARFQCVLVYMRHAKDPTPIICQASWEGQIDFVQRGDNGHGYDPIFI
PEHHDCSAAQMSSDEKNALSHRGKALVQLIAAMQEKGVFTDGNAQ

Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions [H]

COG id: COG0127

COG function: function code F; Xanthosine triphosphate pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAM1 NTPase family [H]

Homologues:

Organism=Escherichia coli, GI1789324, Length=195, Percent_Identity=54.8717948717949, Blast_Score=225, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002637
- InterPro:   IPR020922 [H]

Pfam domain/function: PF01725 Ham1p_like [H]

EC number: =3.6.1.15 [H]

Molecular weight: Translated: 22182; Mature: 22182

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQIVLASGNKGKLAEFDQMLAAYGVKVLPQSQFNVSEVAETGTTFVENAIIKARHAAQI
CCEEEEECCCCCCHHHHHHHHHHHCCEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHH
TGLAAIADDSGLEVDLLQGAPGIYSARYAGENAKDQDNVLKLLDTLKDNPAPRTARFQCV
HHEEEEECCCCCEEEEECCCCCCEEHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
LVYMRHAKDPTPIICQASWEGQIDFVQRGDNGHGYDPIFIPEHHDCSAAQMSSDEKNALS
HEEHHHCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEECCCCCCCCHHHHCCCHHHHHH
HRGKALVQLIAAMQEKGVFTDGNAQ
HHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQQIVLASGNKGKLAEFDQMLAAYGVKVLPQSQFNVSEVAETGTTFVENAIIKARHAAQI
CCEEEEECCCCCCHHHHHHHHHHHCCEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHH
TGLAAIADDSGLEVDLLQGAPGIYSARYAGENAKDQDNVLKLLDTLKDNPAPRTARFQCV
HHEEEEECCCCCEEEEECCCCCCEEHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
LVYMRHAKDPTPIICQASWEGQIDFVQRGDNGHGYDPIFIPEHHDCSAAQMSSDEKNALS
HEEHHHCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEECCCCCCCCHHHHCCCHHHHHH
HRGKALVQLIAAMQEKGVFTDGNAQ
HHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]