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The map label for this gene is 117919534

Identifier: 117919534

GI number: 117919534

Start: 1275514

End: 1276308

Strand: Reverse

Name: 117919534

Synonym: Shewana3_1085

Alternate gene names: NA

Gene position: 1276308-1275514 (Counterclockwise)

Preceding gene: 117919535

Following gene: 117919533

Centisome position: 25.67

GC content: 45.16

Gene sequence:

>795_bases
ATGAACCTCAAGTCGCTAATCAAGATTAGCCTTGTATTGCAGCTCTTAGGATTATCTACGCCGTGTATGGCGGGACGAGA
GTTAACACTGGTCGCGACTAACTACCCTCCCTTTTATACCAATGAGTTACCCGACCAAGGCGGCGTCGCGCTTGTGGTCA
AAGAAGCCTTTAAACGTCGCGGCTACAATGCCAGTGTCAAATTCTATCCCTTCGCGCGGGCAGCATTGCTTGTTAAAACC
GGCCAAGCCGATGGCATTATTGGCCTTTGGTATCGCAAAGAACGTGAGCAATGGGCACACTATTCCGATCCCATCCAAGC
AGTCCAAATTGTGTTCTATAAACGCAAGGATAATCCGTTAAGTTTTAGTCAATTAACTGAACTAAAGCCCTTCACCATAG
GTATTGGTCGCGGCTATGCCAATCCACCCGAGATAGCTGGTGCGGGACTCACAACAGAGGAAGGTAATTCAGATGAGATG
AATCTTAAGAAATTATTTCTAAAACGCATCGACTTAGTCTTAATAGGTCACAACCTTGCTGAGTATTTAATCAAACAACA
TGGCGATGAATATACCGATGCCTTCGAGCAGGTTGGCGAGCCTATCGCGACTGAAGTATTTCATTTAGGGGTTTCCTTGG
CCGTTAGCGATCAAATAACCTTAGTGGCAGAGTTTAACAAAGGCCTTGAATCAATGAAGAAAGATGGCCGTTTAGCCGCG
ATTTTAAGCCGATTCCCTCAACTTCTATCTACTTCAGATCCGATAGAAAAAATACGAACACAAGCACATCCTTAG

Upstream 100 bases:

>100_bases
GTCATAGCTCTCACCATAATAACAACCACACAAAATTCCCACTCAAGGTTCAAACAGCCCCTATACTCAGCAAAGTGACG
CTTTATTTTAAGGGACAAGT

Downstream 100 bases:

>100_bases
CCCGATAACTAGGCTATTTTAGCCACGCCCACACAGCCTGAAAAAATTGTTGGCCGTCTTTTCGACAAAAACACAATTTC
TTTCACTTTCGTGCGCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter; Amino Acid ABC Transporter; Sugar ABC Transporter Periplasmic Protein; ABC-Type Amino Acid Transport/Signal Transduction System; ABC-Type Transporter Periplasmic Component

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNLKSLIKISLVLQLLGLSTPCMAGRELTLVATNYPPFYTNELPDQGGVALVVKEAFKRRGYNASVKFYPFARAALLVKT
GQADGIIGLWYRKEREQWAHYSDPIQAVQIVFYKRKDNPLSFSQLTELKPFTIGIGRGYANPPEIAGAGLTTEEGNSDEM
NLKKLFLKRIDLVLIGHNLAEYLIKQHGDEYTDAFEQVGEPIATEVFHLGVSLAVSDQITLVAEFNKGLESMKKDGRLAA
ILSRFPQLLSTSDPIEKIRTQAHP

Sequences:

>Translated_264_residues
MNLKSLIKISLVLQLLGLSTPCMAGRELTLVATNYPPFYTNELPDQGGVALVVKEAFKRRGYNASVKFYPFARAALLVKT
GQADGIIGLWYRKEREQWAHYSDPIQAVQIVFYKRKDNPLSFSQLTELKPFTIGIGRGYANPPEIAGAGLTTEEGNSDEM
NLKKLFLKRIDLVLIGHNLAEYLIKQHGDEYTDAFEQVGEPIATEVFHLGVSLAVSDQITLVAEFNKGLESMKKDGRLAA
ILSRFPQLLSTSDPIEKIRTQAHP
>Mature_264_residues
MNLKSLIKISLVLQLLGLSTPCMAGRELTLVATNYPPFYTNELPDQGGVALVVKEAFKRRGYNASVKFYPFARAALLVKT
GQADGIIGLWYRKEREQWAHYSDPIQAVQIVFYKRKDNPLSFSQLTELKPFTIGIGRGYANPPEIAGAGLTTEEGNSDEM
NLKKLFLKRIDLVLIGHNLAEYLIKQHGDEYTDAFEQVGEPIATEVFHLGVSLAVSDQITLVAEFNKGLESMKKDGRLAA
ILSRFPQLLSTSDPIEKIRTQAHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29396; Mature: 29396

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKSLIKISLVLQLLGLSTPCMAGRELTLVATNYPPFYTNELPDQGGVALVVKEAFKRR
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHC
GYNASVKFYPFARAALLVKTGQADGIIGLWYRKEREQWAHYSDPIQAVQIVFYKRKDNPL
CCCCCEEEECHHHEEEEEECCCCCCEEEEEEEHHHHHHCCCCCHHHHEEEEEEECCCCCC
SFSQLTELKPFTIGIGRGYANPPEIAGAGLTTEEGNSDEMNLKKLFLKRIDLVLIGHNLA
CHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECHHHH
EYLIKQHGDEYTDAFEQVGEPIATEVFHLGVSLAVSDQITLVAEFNKGLESMKKDGRLAA
HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHEEEECCCEEEEEHHHHHHHHHHHCCHHHH
ILSRFPQLLSTSDPIEKIRTQAHP
HHHHHHHHHCCCCHHHHHHHCCCC
>Mature Secondary Structure
MNLKSLIKISLVLQLLGLSTPCMAGRELTLVATNYPPFYTNELPDQGGVALVVKEAFKRR
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHC
GYNASVKFYPFARAALLVKTGQADGIIGLWYRKEREQWAHYSDPIQAVQIVFYKRKDNPL
CCCCCEEEECHHHEEEEEECCCCCCEEEEEEEHHHHHHCCCCCHHHHEEEEEEECCCCCC
SFSQLTELKPFTIGIGRGYANPPEIAGAGLTTEEGNSDEMNLKKLFLKRIDLVLIGHNLA
CHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECHHHH
EYLIKQHGDEYTDAFEQVGEPIATEVFHLGVSLAVSDQITLVAEFNKGLESMKKDGRLAA
HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHEEEECCCEEEEEHHHHHHHHHHHCCHHHH
ILSRFPQLLSTSDPIEKIRTQAHP
HHHHHHHHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA