Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919506
Identifier: 117919506
GI number: 117919506
Start: 1239892
End: 1240062
Strand: Reverse
Name: 117919506
Synonym: Shewana3_1057
Alternate gene names: NA
Gene position: 1240062-1239892 (Counterclockwise)
Preceding gene: 117919508
Following gene: 117919505
Centisome position: 24.94
GC content: 50.88
Gene sequence:
>171_bases ATGACAAAGCCCACCATGCAAACATCGGATAAGTCCACACGCAGCAATGAGTTAAAGGCGCTGGGATTCATCATTTTCAT ACTCTTTCCCGCACTGACGGTCGCGGGGATCAGTCTCTACGGTTTCATCATTTGGATGATCCAAGCCTTCGGCGGCGTTG TCGGCCACTAA
Upstream 100 bases:
>100_bases ATATATTGTCAAAGCCCATTCATCCCAGCAGGCAAGTCCATTCACATCTGCCCTTTATAGTGCTCCCATCAAAAATCGCT TTCGAACGGAGCTCTTCCCA
Downstream 100 bases:
>100_bases TTCACTGATACATTGAGGACGCTATTATGAAGTGGTTAATCAACCTCTGGCGCACACTAAACAAACCCACAAAAGCTCTC ACCTTAGGCGCTGTCAGCAT
Product: periplasmic nitrate reductase NapE
Products: NA
Alternate protein names: WARNINIG rE Protein; Trimethylamine N-Oxide Reductase System rE Protein; RE Protein
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MTKPTMQTSDKSTRSNELKALGFIIFILFPALTVAGISLYGFIIWMIQAFGGVVGH
Sequences:
>Translated_56_residues MTKPTMQTSDKSTRSNELKALGFIIFILFPALTVAGISLYGFIIWMIQAFGGVVGH >Mature_55_residues TKPTMQTSDKSTRSNELKALGFIIFILFPALTVAGISLYGFIIWMIQAFGGVVGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6119; Mature: 5988
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPTMQTSDKSTRSNELKALGFIIFILFPALTVAGISLYGFIIWMIQAFGGVVGH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKPTMQTSDKSTRSNELKALGFIIFILFPALTVAGISLYGFIIWMIQAFGGVVGH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA