Click here to switch to the map view.

The map label for this gene is torC [H]

Identifier: 117919505

GI number: 117919505

Start: 1238687

End: 1239865

Strand: Reverse

Name: torC [H]

Synonym: Shewana3_1056

Alternate gene names: 117919505

Gene position: 1239865-1238687 (Counterclockwise)

Preceding gene: 117919506

Following gene: 117919504

Centisome position: 24.94

GC content: 51.57

Gene sequence:

>1179_bases
ATGAAGTGGTTAATCAACCTCTGGCGCACACTAAACAAACCCACAAAAGCTCTCACCTTAGGCGCTGTCAGCATCAGTGC
TTTTATCATGGGCATCATCTTCTGGGGCGGATTTAACACCGCACTGGAAGCCACCAACACCGAAGCCTTCTGTATTAGCT
GCCACAGTATGGAAAGCAAGCCTTACCAAGAGTTGCAGGAAACTGTGCATTGGTCGAATCACTCTGGCGTGCGCGCCACC
TGCCCCGACTGTCACGTGCCCCACAACTGGAGCCGTAAGATTGCCCGTAAGATGGAAGCTTCCCACGATGTCTGGGGCTG
GTTATTCAACACGGTCAACACCCCTGAAAAATTTGAAGCTAAACGCCTCGAAATGGCGAGCCGCGAATGGAAACGTTTCG
ATCGCGACAATTCTCTGGCCTGTAAAAACTGCCACAACTACAACTCGATCAAGTGGGAAAGCATGTCACCACTGGCGCAA
AAACAGATGAAACGCGCCGCCGAAATCGACCAAAGCTGTATCGATTGCCACAAAGGCATTGCCCACCATTTACCTGAAAT
GGGCACGGCCCGCGCACCCGAACTCATCGCCGAAGTCGGCGCTGGCGTCAGCTCAGTCGAAACCAACCAAACCTACTACA
GCGCCCTGACTAAGCCACTGTTCTTTAGTGAAAAAGGTGACGTTGAAGCCGGTACTTTAAACGTTGCGACTAAAGTAAAA
GTGCTCGAAACCCAAGGTAAGCGTATCAAAATTGGTATCGATGGCTGGCGTAAGAAAATCGGCGCAGGCCGCGTGATCTA
CATGGACTTTGGCGTAAACATTCTGTCGGCGCAGTTAAGCAAAGATGCAGCCGAAACCGAAGGTGTTATCCAAACCTTTG
AAGAGAAAGAAGACCCAATGACAGGCCTGAAATGGCAACGGGTAGAAGCCCAAATCTGGACCGATAAGGATTACCTGCTC
ACCGAGCTGCAACCACTCTGGGGCTATGCCCGCGACACGTTCCGCTCAAGCTGTAGTGTGTGCCACACCCAGCCAGATGA
AGCGCATTTCGATGCCAATACCTGGCCAGGCATGTTCCAAGGCATGTTGGCCTTCGTGAACATGGACCAAGACACCCAAG
CGCTGGTGCAGAAATACCTGCAGGAACATTCGTCAACCTTCGTGAAAAAAGAGCACTAA

Upstream 100 bases:

>100_bases
CGGTCGCGGGGATCAGTCTCTACGGTTTCATCATTTGGATGATCCAAGCCTTCGGCGGCGTTGTCGGCCACTAATTCACT
GATACATTGAGGACGCTATT

Downstream 100 bases:

>100_bases
TTCGGGAGTAATACCATGAATAGAAGAGACTTTTTAAAAGGCTTAGCCTCAACCTCTTTCGTTGCTTTAGGTGGCAGCTC
AGTGTTAGCGCCCTTAAACG

Product: trimethylamine-N-oxide reductase c-type cytochrome TorC

Products: H2O; trimethylamine; NAD [C]

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKWLINLWRTLNKPTKALTLGAVSISAFIMGIIFWGGFNTALEATNTEAFCISCHSMESKPYQELQETVHWSNHSGVRAT
CPDCHVPHNWSRKIARKMEASHDVWGWLFNTVNTPEKFEAKRLEMASREWKRFDRDNSLACKNCHNYNSIKWESMSPLAQ
KQMKRAAEIDQSCIDCHKGIAHHLPEMGTARAPELIAEVGAGVSSVETNQTYYSALTKPLFFSEKGDVEAGTLNVATKVK
VLETQGKRIKIGIDGWRKKIGAGRVIYMDFGVNILSAQLSKDAAETEGVIQTFEEKEDPMTGLKWQRVEAQIWTDKDYLL
TELQPLWGYARDTFRSSCSVCHTQPDEAHFDANTWPGMFQGMLAFVNMDQDTQALVQKYLQEHSSTFVKKEH

Sequences:

>Translated_392_residues
MKWLINLWRTLNKPTKALTLGAVSISAFIMGIIFWGGFNTALEATNTEAFCISCHSMESKPYQELQETVHWSNHSGVRAT
CPDCHVPHNWSRKIARKMEASHDVWGWLFNTVNTPEKFEAKRLEMASREWKRFDRDNSLACKNCHNYNSIKWESMSPLAQ
KQMKRAAEIDQSCIDCHKGIAHHLPEMGTARAPELIAEVGAGVSSVETNQTYYSALTKPLFFSEKGDVEAGTLNVATKVK
VLETQGKRIKIGIDGWRKKIGAGRVIYMDFGVNILSAQLSKDAAETEGVIQTFEEKEDPMTGLKWQRVEAQIWTDKDYLL
TELQPLWGYARDTFRSSCSVCHTQPDEAHFDANTWPGMFQGMLAFVNMDQDTQALVQKYLQEHSSTFVKKEH
>Mature_392_residues
MKWLINLWRTLNKPTKALTLGAVSISAFIMGIIFWGGFNTALEATNTEAFCISCHSMESKPYQELQETVHWSNHSGVRAT
CPDCHVPHNWSRKIARKMEASHDVWGWLFNTVNTPEKFEAKRLEMASREWKRFDRDNSLACKNCHNYNSIKWESMSPLAQ
KQMKRAAEIDQSCIDCHKGIAHHLPEMGTARAPELIAEVGAGVSSVETNQTYYSALTKPLFFSEKGDVEAGTLNVATKVK
VLETQGKRIKIGIDGWRKKIGAGRVIYMDFGVNILSAQLSKDAAETEGVIQTFEEKEDPMTGLKWQRVEAQIWTDKDYLL
TELQPLWGYARDTFRSSCSVCHTQPDEAHFDANTWPGMFQGMLAFVNMDQDTQALVQKYLQEHSSTFVKKEH

Specific function: Part of the anaerobic respiratory chain of trimethylamine-N-oxide reductase TorA. Acts by transferring electrons from the membranous menaquinones to TorA. This transfer probably involves an electron transfer pathway from menaquinones to the N-terminal dom

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TorC/TorY family [H]

Homologues:

Organism=Escherichia coli, GI1787230, Length=388, Percent_Identity=37.8865979381443, Blast_Score=284, Evalue=6e-78,
Organism=Escherichia coli, GI1788530, Length=181, Percent_Identity=50.2762430939227, Blast_Score=207, Evalue=8e-55,
Organism=Escherichia coli, GI1788181, Length=353, Percent_Identity=32.0113314447592, Blast_Score=187, Evalue=8e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009154
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 44535; Mature: 44535

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWLINLWRTLNKPTKALTLGAVSISAFIMGIIFWGGFNTALEATNTEAFCISCHSMESK
CHHHHHHHHHCCCCHHHHEEHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCC
PYQELQETVHWSNHSGVRATCPDCHVPHNWSRKIARKMEASHDVWGWLFNTVNTPEKFEA
HHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
KRLEMASREWKRFDRDNSLACKNCHNYNSIKWESMSPLAQKQMKRAAEIDQSCIDCHKGI
HHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AHHLPEMGTARAPELIAEVGAGVSSVETNQTYYSALTKPLFFSEKGDVEAGTLNVATKVK
HHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEECCCCCCCCCEEEHHHEEE
VLETQGKRIKIGIDGWRKKIGAGRVIYMDFGVNILSAQLSKDAAETEGVIQTFEEKEDPM
EEECCCCEEEEECCHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TGLKWQRVEAQIWTDKDYLLTELQPLWGYARDTFRSSCSVCHTQPDEAHFDANTWPGMFQ
CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
GMLAFVNMDQDTQALVQKYLQEHSSTFVKKEH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKWLINLWRTLNKPTKALTLGAVSISAFIMGIIFWGGFNTALEATNTEAFCISCHSMESK
CHHHHHHHHHCCCCHHHHEEHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCC
PYQELQETVHWSNHSGVRATCPDCHVPHNWSRKIARKMEASHDVWGWLFNTVNTPEKFEA
HHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
KRLEMASREWKRFDRDNSLACKNCHNYNSIKWESMSPLAQKQMKRAAEIDQSCIDCHKGI
HHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AHHLPEMGTARAPELIAEVGAGVSSVETNQTYYSALTKPLFFSEKGDVEAGTLNVATKVK
HHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEECCCCCCCCCEEEHHHEEE
VLETQGKRIKIGIDGWRKKIGAGRVIYMDFGVNILSAQLSKDAAETEGVIQTFEEKEDPM
EEECCCCEEEEECCHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TGLKWQRVEAQIWTDKDYLLTELQPLWGYARDTFRSSCSVCHTQPDEAHFDANTWPGMFQ
CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
GMLAFVNMDQDTQALVQKYLQEHSSTFVKKEH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: trimethylamine-N-oxide; NADH [C]

Specific reaction: trimethylamine-N-oxide + NADH = H2O + trimethylamine + NAD [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]