Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is lnt [H]
Identifier: 117919453
GI number: 117919453
Start: 1174223
End: 1175773
Strand: Reverse
Name: lnt [H]
Synonym: Shewana3_1004
Alternate gene names: 117919453
Gene position: 1175773-1174223 (Counterclockwise)
Preceding gene: 117919454
Following gene: 117919452
Centisome position: 23.65
GC content: 51.84
Gene sequence:
>1551_bases GTGCTAACTAACATTCGGGCTTTTGCCCAACAAAAGTCCCGACTGAGCGTGTTACGGCTCGTGCTGGCGTTTATTTTAGG CGCCAGTACGGCGCTTTCCTTTGCCCCTTATTCCTTGTGGATTATCTATCCCGTCGCCATGGCCTTAGCCCTGTGGCTGA GTGGCTCCTTGACTCCTAAAGCCAGCTTCTTCCATTGGTTAAGCTTTGGTTTTGGCTGTTTCGCCGTTGGGATCAGTTGG GTGCATGTCAGTATGGACACCTTCGGTGGCCTCCCCTTGGCCGCCTCAGTGGGGCTAATGGCGCTGTTAGCCCTCTATTT AGCCCTTTATCCGGCCTTAACGGGTCTCGGTTTAGCGTGGTTGACCCGCACTAATACTCCGTCGCTATGGCGCAATCTAT TACTCTTCCCCTCGCTTTGGGTCTTAGCCGAATGGGCTAGAGGCTGGGTGATGACAGGATTTCCCTGGATCTGGGCCGGC TACTCTCAAACCCAAGGTCCATTAAAGGAACTCGCGAGTATTATTGGTGCCCTAGGACTCAGTTTCTTAATTGCGATGCT CGCAGGCGCCTTAGCCCTGTGTTTTAGCAAGCGCTACAAAAGCCTGTTGATTTTACTGCCCATCATCGCAGCTGCGGCTT GGGTTGCCCCAAAGCTAACGCAAATCCAGCCGACAGGCGAATCAGTTAAAGTTGCTCTGGTGCAGGGAAACATTCCCCAA AGTATGAAATGGGAACCCGAGGCACTCTGGCCAACCCTATTGAAATACATGGATTTATCCCGTGAGCACTTCGACGCTGA CATTATCGTCTGGCCAGAAGCCGCGATCCCGGCGCCAGAATCTATGGTGCAAGACTTTTTGGATAATGCTAACAAGGTTG CCAACCTTAACCACACTTCCATCATCACGGGGATTATTAGCCGTCAACAGAACGAGTTTTATAACTCTTTGATCGTGCTA GGTAACCATAATCAGAAGCAACAAGATACGCCGGATTATGAGAGCGATGGCAGCAACCAGTTTAAAAAACACCATCTACT GCCTATCGGCGAGTTTGTGCCCTTTGAAACCTTACTGCGCCCAATTGCGCCTTTCTTCAATCTGCCAATGTCCTCCTTCG CTCGGGGCGATTATCAACAGCCGAACTTGAGCGCCGTAGGCCATAAAATTGCCCCGGCAATTTGTTATGAAATCGCCTTC CCAGAGCAGCTGCGTGACAGTGTTAACCTCGGCACCGATCTGCTGTTAACCGTATCGAACGATGCGTGGTTTGGCACCTC AAATGGGCCGTTGCAGCACATGGAAATCGCCCAAATGCGCGCCATCGAATTGGGCCGTCCTCTGGTGCGCGCCACCAACA ACGGTGTGACCGCGGTTGTTGATGAGAAAGGCAATATCACAGCTGCACTGCCGCAATTCGAAACGGGCGTGCTAAGCGCG ACGATTCCACTGGTCACAGGCCAAACTTGGTTTGCCAAAATCGGCCAAACACCGCTGCTATTGCTGTGTGGTGCGCTGCT GTTCGTCGGGTTTATTCGTCGTAAAAAATAA
Upstream 100 bases:
>100_bases CTTAATCCAACTCAGAGTTAAACTCCCCGATCCCAATGTCGGTGAAGACGTAGAATAACCCTCTACGTAAGAATAACGCT CAGTGTAAGAAGAATTATCC
Downstream 100 bases:
>100_bases CAATAGAGTCAGAAATTGATTAATCAGAAACGCATTCAAGGTTTTACCTTAATCGAACTCGTCGTCGTTATCATAGTGCT CGGGATTTTAGCGGTTATTG
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MLTNIRAFAQQKSRLSVLRLVLAFILGASTALSFAPYSLWIIYPVAMALALWLSGSLTPKASFFHWLSFGFGCFAVGISW VHVSMDTFGGLPLAASVGLMALLALYLALYPALTGLGLAWLTRTNTPSLWRNLLLFPSLWVLAEWARGWVMTGFPWIWAG YSQTQGPLKELASIIGALGLSFLIAMLAGALALCFSKRYKSLLILLPIIAAAAWVAPKLTQIQPTGESVKVALVQGNIPQ SMKWEPEALWPTLLKYMDLSREHFDADIIVWPEAAIPAPESMVQDFLDNANKVANLNHTSIITGIISRQQNEFYNSLIVL GNHNQKQQDTPDYESDGSNQFKKHHLLPIGEFVPFETLLRPIAPFFNLPMSSFARGDYQQPNLSAVGHKIAPAICYEIAF PEQLRDSVNLGTDLLLTVSNDAWFGTSNGPLQHMEIAQMRAIELGRPLVRATNNGVTAVVDEKGNITAALPQFETGVLSA TIPLVTGQTWFAKIGQTPLLLLCGALLFVGFIRRKK
Sequences:
>Translated_516_residues MLTNIRAFAQQKSRLSVLRLVLAFILGASTALSFAPYSLWIIYPVAMALALWLSGSLTPKASFFHWLSFGFGCFAVGISW VHVSMDTFGGLPLAASVGLMALLALYLALYPALTGLGLAWLTRTNTPSLWRNLLLFPSLWVLAEWARGWVMTGFPWIWAG YSQTQGPLKELASIIGALGLSFLIAMLAGALALCFSKRYKSLLILLPIIAAAAWVAPKLTQIQPTGESVKVALVQGNIPQ SMKWEPEALWPTLLKYMDLSREHFDADIIVWPEAAIPAPESMVQDFLDNANKVANLNHTSIITGIISRQQNEFYNSLIVL GNHNQKQQDTPDYESDGSNQFKKHHLLPIGEFVPFETLLRPIAPFFNLPMSSFARGDYQQPNLSAVGHKIAPAICYEIAF PEQLRDSVNLGTDLLLTVSNDAWFGTSNGPLQHMEIAQMRAIELGRPLVRATNNGVTAVVDEKGNITAALPQFETGVLSA TIPLVTGQTWFAKIGQTPLLLLCGALLFVGFIRRKK >Mature_516_residues MLTNIRAFAQQKSRLSVLRLVLAFILGASTALSFAPYSLWIIYPVAMALALWLSGSLTPKASFFHWLSFGFGCFAVGISW VHVSMDTFGGLPLAASVGLMALLALYLALYPALTGLGLAWLTRTNTPSLWRNLLLFPSLWVLAEWARGWVMTGFPWIWAG YSQTQGPLKELASIIGALGLSFLIAMLAGALALCFSKRYKSLLILLPIIAAAAWVAPKLTQIQPTGESVKVALVQGNIPQ SMKWEPEALWPTLLKYMDLSREHFDADIIVWPEAAIPAPESMVQDFLDNANKVANLNHTSIITGIISRQQNEFYNSLIVL GNHNQKQQDTPDYESDGSNQFKKHHLLPIGEFVPFETLLRPIAPFFNLPMSSFARGDYQQPNLSAVGHKIAPAICYEIAF PEQLRDSVNLGTDLLLTVSNDAWFGTSNGPLQHMEIAQMRAIELGRPLVRATNNGVTAVVDEKGNITAALPQFETGVLSA TIPLVTGQTWFAKIGQTPLLLLCGALLFVGFIRRKK
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=522, Percent_Identity=41.7624521072797, Blast_Score=369, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 56693; Mature: 56693
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTNIRAFAQQKSRLSVLRLVLAFILGASTALSFAPYSLWIIYPVAMALALWLSGSLTPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCH ASFFHWLSFGFGCFAVGISWVHVSMDTFGGLPLAASVGLMALLALYLALYPALTGLGLAW HHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHE LTRTNTPSLWRNLLLFPSLWVLAEWARGWVMTGFPWIWAGYSQTQGPLKELASIIGALGL EECCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEECCCCCCCCHHHHHHHHHHHHHH SFLIAMLAGALALCFSKRYKSLLILLPIIAAAAWVAPKLTQIQPTGESVKVALVQGNIPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEEECCCCC SMKWEPEALWPTLLKYMDLSREHFDADIIVWPEAAIPAPESMVQDFLDNANKVANLNHTS CCCCCCHHHHHHHHHHHHCCHHHCCCCEEEECCCCCCCCHHHHHHHHHCCHHCCCCCHHH IITGIISRQQNEFYNSLIVLGNHNQKQQDTPDYESDGSNQFKKHHLLPIGEFVPFETLLR HHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHH PIAPFFNLPMSSFARGDYQQPNLSAVGHKIAPAICYEIAFPEQLRDSVNLGTDLLLTVSN HHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECC DAWFGTSNGPLQHMEIAQMRAIELGRPLVRATNNGVTAVVDEKGNITAALPQFETGVLSA CCEECCCCCCHHHHHHHHHHHHHHCCCHHEECCCCEEEEEECCCCEEEECCCCCCCHHHE TIPLVTGQTWFAKIGQTPLLLLCGALLFVGFIRRKK EEHEEECCHHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTNIRAFAQQKSRLSVLRLVLAFILGASTALSFAPYSLWIIYPVAMALALWLSGSLTPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCH ASFFHWLSFGFGCFAVGISWVHVSMDTFGGLPLAASVGLMALLALYLALYPALTGLGLAW HHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHE LTRTNTPSLWRNLLLFPSLWVLAEWARGWVMTGFPWIWAGYSQTQGPLKELASIIGALGL EECCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEECCCCCCCCHHHHHHHHHHHHHH SFLIAMLAGALALCFSKRYKSLLILLPIIAAAAWVAPKLTQIQPTGESVKVALVQGNIPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEEECCCCC SMKWEPEALWPTLLKYMDLSREHFDADIIVWPEAAIPAPESMVQDFLDNANKVANLNHTS CCCCCCHHHHHHHHHHHHCCHHHCCCCEEEECCCCCCCCHHHHHHHHHCCHHCCCCCHHH IITGIISRQQNEFYNSLIVLGNHNQKQQDTPDYESDGSNQFKKHHLLPIGEFVPFETLLR HHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHH PIAPFFNLPMSSFARGDYQQPNLSAVGHKIAPAICYEIAFPEQLRDSVNLGTDLLLTVSN HHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECC DAWFGTSNGPLQHMEIAQMRAIELGRPLVRATNNGVTAVVDEKGNITAALPQFETGVLSA CCEECCCCCCHHHHHHHHHHHHHHCCCHHEECCCCEEEEEECCCCEEEECCCCCCCHHHE TIPLVTGQTWFAKIGQTPLLLLCGALLFVGFIRRKK EEHEEECCHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]