Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is rimI [H]
Identifier: 117919436
GI number: 117919436
Start: 1158382
End: 1158834
Strand: Direct
Name: rimI [H]
Synonym: Shewana3_0987
Alternate gene names: 117919436
Gene position: 1158382-1158834 (Clockwise)
Preceding gene: 117919435
Following gene: 117919451
Centisome position: 23.3
GC content: 52.98
Gene sequence:
>453_bases TTGCAAATTGTGCTCCTGACGCCAACGGATGTAAGCCAAATAGCACGCATTGAAGCGAGTGCCCATTCCCATCCTATGAG TGAGAATAATCTTGCCGATTGTTTTGGCCACTTGTACCGCGTCCTTGGATTAATGCAACGCGATGGCGAGTTACTCGGCT TTGCGATTGTGCAGCAGATTGTCGATGAGGCAACGCTGCTGGATATTTGTTTGTCGCCAGCGCAACAAGGGCGAGGTTAT GGGCATCTGCTACTCACGGCGGTTATCGACTGCGCTAAGGCTGCCAAGGCGGTGGTGCTGATGCTGGAGGTTCGCGAATC AAACCTTGCCGCGCGCGCGCTCTATCAGAAGCGGGGGTTTGTCGAAACTGGCCGTCGCAAGGGCTATTACCCTTTGGCTG AGGGCAAAGAAGATGCGATTTTGATGGACTTAGCCTTAAGCGAAACGGCTTAA
Upstream 100 bases:
>100_bases CCTAAGCCTCTATTGGTTGTGCCCTGTACATTATCGTGAGTTACCTTTTAATTTGGATTTTCCCGTGAGTCATCAAGTTC TTAAGACCCTTAGTGAATCG
Downstream 100 bases:
>100_bases GATTTTAGAAGTCGATAAAAAAAACAGCGCTTTAGCGCTGTTTTTTTATGGAGTTAATAAAGCGAAGGTTACTTCACTTC TTTACCTTGAGCTTGCAGGT
Product: SSU ribosomal protein S18P alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MQIVLLTPTDVSQIARIEASAHSHPMSENNLADCFGHLYRVLGLMQRDGELLGFAIVQQIVDEATLLDICLSPAQQGRGY GHLLLTAVIDCAKAAKAVVLMLEVRESNLAARALYQKRGFVETGRRKGYYPLAEGKEDAILMDLALSETA
Sequences:
>Translated_150_residues MQIVLLTPTDVSQIARIEASAHSHPMSENNLADCFGHLYRVLGLMQRDGELLGFAIVQQIVDEATLLDICLSPAQQGRGY GHLLLTAVIDCAKAAKAVVLMLEVRESNLAARALYQKRGFVETGRRKGYYPLAEGKEDAILMDLALSETA >Mature_150_residues MQIVLLTPTDVSQIARIEASAHSHPMSENNLADCFGHLYRVLGLMQRDGELLGFAIVQQIVDEATLLDICLSPAQQGRGY GHLLLTAVIDCAKAAKAVVLMLEVRESNLAARALYQKRGFVETGRRKGYYPLAEGKEDAILMDLALSETA
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=145, Percent_Identity=42.7586206896552, Blast_Score=108, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 16384; Mature: 16384
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIVLLTPTDVSQIARIEASAHSHPMSENNLADCFGHLYRVLGLMQRDGELLGFAIVQQI CEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VDEATLLDICLSPAQQGRGYGHLLLTAVIDCAKAAKAVVLMLEVRESNLAARALYQKRGF HHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VETGRRKGYYPLAEGKEDAILMDLALSETA HHCCCCCCCCCCCCCCCCEEEEEEHHCCCC >Mature Secondary Structure MQIVLLTPTDVSQIARIEASAHSHPMSENNLADCFGHLYRVLGLMQRDGELLGFAIVQQI CEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VDEATLLDICLSPAQQGRGYGHLLLTAVIDCAKAAKAVVLMLEVRESNLAARALYQKRGF HHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VETGRRKGYYPLAEGKEDAILMDLALSETA HHCCCCCCCCCCCCCCCCEEEEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]