Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919435
Identifier: 117919435
GI number: 117919435
Start: 1157936
End: 1158286
Strand: Direct
Name: 117919435
Synonym: Shewana3_0986
Alternate gene names: NA
Gene position: 1157936-1158286 (Clockwise)
Preceding gene: 117919433
Following gene: 117919436
Centisome position: 23.29
GC content: 52.42
Gene sequence:
>351_bases ATGAATAAATCAGCCTATTTAGCCGCAATGGAGATTACTCCCTGGCAGCTTCGCGATACTAAAGTGCGACCTTATCAAGT GGTTTGGGATGCAGACGAGATGACGCCCGCCGCCGAGCCTTTACTCGAAACCGTGCTCGGATTAATCGGCATCAGTAAGG ACGACTGTGAGTTCAACACTGAGCCGCATAAGGGCAAAACCATAGTCTGGGATTTACGCCGCAATAGGGTTAGGCCCAGA GTAGCTTGGTTAGTGTCGGATCCCTTAGCGGACTTGCTGTCACGCAGTGAGGCAAAGCGTGCCTTATGGGCCCAGATCTG CCAGTGGCGTGAGCAGCAATTAACGGCCTAA
Upstream 100 bases:
>100_bases ATGAATTTGCATGGAGACCTGCGTCGTGACAATAACATTCGGTCTATTTAGCTGGTATCCTTGTACTTGTGTTAGAACCT AATGAAACCCCAATCACCCC
Downstream 100 bases:
>100_bases GCCTCTATTGGTTGTGCCCTGTACATTATCGTGAGTTACCTTTTAATTTGGATTTTCCCGTGAGTCATCAAGTTCTTAAG ACCCTTAGTGAATCGTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MNKSAYLAAMEITPWQLRDTKVRPYQVVWDADEMTPAAEPLLETVLGLIGISKDDCEFNTEPHKGKTIVWDLRRNRVRPR VAWLVSDPLADLLSRSEAKRALWAQICQWREQQLTA
Sequences:
>Translated_116_residues MNKSAYLAAMEITPWQLRDTKVRPYQVVWDADEMTPAAEPLLETVLGLIGISKDDCEFNTEPHKGKTIVWDLRRNRVRPR VAWLVSDPLADLLSRSEAKRALWAQICQWREQQLTA >Mature_116_residues MNKSAYLAAMEITPWQLRDTKVRPYQVVWDADEMTPAAEPLLETVLGLIGISKDDCEFNTEPHKGKTIVWDLRRNRVRPR VAWLVSDPLADLLSRSEAKRALWAQICQWREQQLTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13419; Mature: 13419
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSAYLAAMEITPWQLRDTKVRPYQVVWDADEMTPAAEPLLETVLGLIGISKDDCEFNT CCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC EPHKGKTIVWDLRRNRVRPRVAWLVSDPLADLLSRSEAKRALWAQICQWREQQLTA CCCCCCEEEEECCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKSAYLAAMEITPWQLRDTKVRPYQVVWDADEMTPAAEPLLETVLGLIGISKDDCEFNT CCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC EPHKGKTIVWDLRRNRVRPRVAWLVSDPLADLLSRSEAKRALWAQICQWREQQLTA CCCCCCEEEEECCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA