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The map label for this gene is 117919386

Identifier: 117919386

GI number: 117919386

Start: 1096680

End: 1098731

Strand: Direct

Name: 117919386

Synonym: Shewana3_0937

Alternate gene names: NA

Gene position: 1096680-1098731 (Clockwise)

Preceding gene: 117919385

Following gene: 117919387

Centisome position: 22.06

GC content: 48.73

Gene sequence:

>2052_bases
ATGTCTAGTCGCTACTTTGTCATGTCGCTGACCGCGCTTGCGGTTTCCTGTGTCTACACTCATCCCCTCAAAGCAAACCC
ACTCTATTCTCAAACACTCGATCTGATTGAGCTCAATGACCAATATCACTCCAGTGATGATGGGATGCAGCTGAGTTACT
TAAATAGCTTAACCTTATTGCGGGCCGACCACAGTGGAAATACCGCGAATATCAGTATGCGCTCCGCTAGCCAAGGTGTG
GCCGTGATGCAAGATAGGGTGTATTTTTCACCCGCGCCTTATTCGGCGCCGCAGTTGCAGTTATTGCCTAACCTTTTACT
ACAGCAAAATGTTACTAGCATACCACTGGCGGATATGACGGTAGGCGGGCAGGGCGCTTTCGGTGTGGTGAATTATCAGA
GCCTTGAAATAGCTAACCGACCTCAGTCGGGCAGCTTTCTCGTTGAAGGTTCGACAGAGTCGGATTTGAATGCCGGCATG
AGTTGGGGCGTTAAGCAAAAAGAATATGGCGCATTATTCGCAGCGAATTACCAGAAAGAACAAGGTGATGCGAATTTTTT
CAATGGCAGCGATGCCGATAGAACCAAAACGGATATGTTGTTCAAGGTGAATGCGGCAAGTTTGCTTGGCGCACGCAGTC
CGCAGCAGACGGAATTTACCTACCAATTTATCGATGATAACAGTTATCGCTCGCAGCTTGGTGTCACCACGGCGGACTGG
CAGCAGGATCCCTTACTCTTGTACTCGGCAACGGCGCAGGATAAGCATAAAGGGCGGCAGCACAAGTATCAGCTTTCACA
CCAAGTGGATTTAGGCGGCAGTAAAGTGATCAGTGACTTTTACTATCAGTCCTATTCACAACAGCTGGCACAACTTGGGT
TGTTTAATGGGCAAGAGATTGACACAGCAACGCTTGCCGATATCGCCGCCTTTGATCGAGCTCCAAGTGCAAATGGCGCC
GATTTAAATCTGCTCGTCCAAGATAACGATTACAGTGCCTTTGGCGCCCAGACCCAAGCCATAAACCAGTACGGCGAACA
TCAGATCATTTACAGCGCTCGTTATCATACGGATAAGGCGGAAATGCGCTTTGGCGAGCAAACGGCGTTATGGCAAGCGG
ATAGAAGCCTTGCGGTTGATGAGTCAAACGCGTTGTTCGCTTATACCGATGATGCCACTGCGCTAACGTCGGCCATTGAT
TCGCTATTTCGCTGGCAAGGCATGCAAATCAAGTTAGGCCTGACTTACGAGCATGTGAGTGTTAATCGTGAAGTGAATCA
GCCTGTTGCGAGACTCGATGAAGCGGATTTCTCCGACAGTGATTGGATGCCGCAATTAGGTGTGCTTTATGATGCGGGCG
ATTGGCGTTTTAGTACCGATATCCGTAGGGCATGGACTGCGGCGAGTGCGGGAAATACTACACAAGAGGCTCAGGTGTCG
CTGCACTATCAAGTGAGCGCCCAATATGCGCGTGAAGGGATAAAAGCCGATTTACGGGCCTATGTGCAAGAGTTCGACAA
TTTGCATGTGGACTGCGATAGCTATTCGATGTGCGCCGATGCACGCTTGTTAACCCAAGAGAATATTCCCGATGTACTCA
CCTATGGTGTAGAACTTGGCCTTGGCTATCGCTGGGACTTGGGTGGGGTAGAGCTACCCTTAGGGCTAAATTATCAATAT
CTTAGCGCTGAGTATCAAACCAGTACTTGTACCGATGTTCAAGGCTGTGTTCTAGAGGGCGATAGATTAGCTTGGTTACC
CGAACATCAATTGCAGTTGAGTGCAGGGGTTAACTATGGCGAATATCAATTAAATCTTGAGGCGGCCTATCAATCTGAGC
GCGATTTCAGCCAATTTGGCAGTGAGTTGCAACGGGTATCAGGCCAATGGCGGGTCGATTTAGCGGCAAACTATGATTTT
GATAAACACCATAGGTTGTATTTTAGGGTAGAAAACCTCCTCGATGAGTCCTTAGTGACCGCAGCATCAAATAGCGGAAT
TCGGACTGAAAATGGACGGATCAGCTATTTGGGTTATCAGTGGCGTTTCTAA

Upstream 100 bases:

>100_bases
GAAAGCGACATTCGTCGCTTTTTTTTTCGAGCAAATTCAGCTATTTTACAAAATAACAACAAAAACGCCGTACGCTAACA
AACACTTTTGGGAGCTTGGT

Downstream 100 bases:

>100_bases
ACTGAATTAAATTTTGTTTAAAGATTATTCAAAGAGAAAGCGAAAAGGTCGTTTTAGCTATCGTCATAAAGAGGTATCGA
CCTTTCGCTAAATTATTTCT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Protein; NB Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; Outer Membrane Receptor For Fe3+-Dicitrate; Outer Membrane Receptor Protein; Nb Dependent Receptor; NB Dependent/Ligand-Gated Channel; NB-Dependent Outer Membrane Protein; Nb-Dependent Receptor; Outer Membrane Iron(III) Dicitrate Receptor; FecA-Like Outer Membrane Receptor

Number of amino acids: Translated: 683; Mature: 682

Protein sequence:

>683_residues
MSSRYFVMSLTALAVSCVYTHPLKANPLYSQTLDLIELNDQYHSSDDGMQLSYLNSLTLLRADHSGNTANISMRSASQGV
AVMQDRVYFSPAPYSAPQLQLLPNLLLQQNVTSIPLADMTVGGQGAFGVVNYQSLEIANRPQSGSFLVEGSTESDLNAGM
SWGVKQKEYGALFAANYQKEQGDANFFNGSDADRTKTDMLFKVNAASLLGARSPQQTEFTYQFIDDNSYRSQLGVTTADW
QQDPLLLYSATAQDKHKGRQHKYQLSHQVDLGGSKVISDFYYQSYSQQLAQLGLFNGQEIDTATLADIAAFDRAPSANGA
DLNLLVQDNDYSAFGAQTQAINQYGEHQIIYSARYHTDKAEMRFGEQTALWQADRSLAVDESNALFAYTDDATALTSAID
SLFRWQGMQIKLGLTYEHVSVNREVNQPVARLDEADFSDSDWMPQLGVLYDAGDWRFSTDIRRAWTAASAGNTTQEAQVS
LHYQVSAQYAREGIKADLRAYVQEFDNLHVDCDSYSMCADARLLTQENIPDVLTYGVELGLGYRWDLGGVELPLGLNYQY
LSAEYQTSTCTDVQGCVLEGDRLAWLPEHQLQLSAGVNYGEYQLNLEAAYQSERDFSQFGSELQRVSGQWRVDLAANYDF
DKHHRLYFRVENLLDESLVTAASNSGIRTENGRISYLGYQWRF

Sequences:

>Translated_683_residues
MSSRYFVMSLTALAVSCVYTHPLKANPLYSQTLDLIELNDQYHSSDDGMQLSYLNSLTLLRADHSGNTANISMRSASQGV
AVMQDRVYFSPAPYSAPQLQLLPNLLLQQNVTSIPLADMTVGGQGAFGVVNYQSLEIANRPQSGSFLVEGSTESDLNAGM
SWGVKQKEYGALFAANYQKEQGDANFFNGSDADRTKTDMLFKVNAASLLGARSPQQTEFTYQFIDDNSYRSQLGVTTADW
QQDPLLLYSATAQDKHKGRQHKYQLSHQVDLGGSKVISDFYYQSYSQQLAQLGLFNGQEIDTATLADIAAFDRAPSANGA
DLNLLVQDNDYSAFGAQTQAINQYGEHQIIYSARYHTDKAEMRFGEQTALWQADRSLAVDESNALFAYTDDATALTSAID
SLFRWQGMQIKLGLTYEHVSVNREVNQPVARLDEADFSDSDWMPQLGVLYDAGDWRFSTDIRRAWTAASAGNTTQEAQVS
LHYQVSAQYAREGIKADLRAYVQEFDNLHVDCDSYSMCADARLLTQENIPDVLTYGVELGLGYRWDLGGVELPLGLNYQY
LSAEYQTSTCTDVQGCVLEGDRLAWLPEHQLQLSAGVNYGEYQLNLEAAYQSERDFSQFGSELQRVSGQWRVDLAANYDF
DKHHRLYFRVENLLDESLVTAASNSGIRTENGRISYLGYQWRF
>Mature_682_residues
SSRYFVMSLTALAVSCVYTHPLKANPLYSQTLDLIELNDQYHSSDDGMQLSYLNSLTLLRADHSGNTANISMRSASQGVA
VMQDRVYFSPAPYSAPQLQLLPNLLLQQNVTSIPLADMTVGGQGAFGVVNYQSLEIANRPQSGSFLVEGSTESDLNAGMS
WGVKQKEYGALFAANYQKEQGDANFFNGSDADRTKTDMLFKVNAASLLGARSPQQTEFTYQFIDDNSYRSQLGVTTADWQ
QDPLLLYSATAQDKHKGRQHKYQLSHQVDLGGSKVISDFYYQSYSQQLAQLGLFNGQEIDTATLADIAAFDRAPSANGAD
LNLLVQDNDYSAFGAQTQAINQYGEHQIIYSARYHTDKAEMRFGEQTALWQADRSLAVDESNALFAYTDDATALTSAIDS
LFRWQGMQIKLGLTYEHVSVNREVNQPVARLDEADFSDSDWMPQLGVLYDAGDWRFSTDIRRAWTAASAGNTTQEAQVSL
HYQVSAQYAREGIKADLRAYVQEFDNLHVDCDSYSMCADARLLTQENIPDVLTYGVELGLGYRWDLGGVELPLGLNYQYL
SAEYQTSTCTDVQGCVLEGDRLAWLPEHQLQLSAGVNYGEYQLNLEAAYQSERDFSQFGSELQRVSGQWRVDLAANYDFD
KHHRLYFRVENLLDESLVTAASNSGIRTENGRISYLGYQWRF

Specific function: Unknown

COG id: COG4772

COG function: function code P; Outer membrane receptor for Fe3+-dicitrate

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76340; Mature: 76209

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRYFVMSLTALAVSCVYTHPLKANPLYSQTLDLIELNDQYHSSDDGMQLSYLNSLTLL
CCCCEEEEEHHHHHHHHHEECCCCCCCCHHHCEEEEEECCCCCCCCCCEEEEEECCEEEE
RADHSGNTANISMRSASQGVAVMQDRVYFSPAPYSAPQLQLLPNLLLQQNVTSIPLADMT
EECCCCCEEEEEECCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEE
VGGQGAFGVVNYQSLEIANRPQSGSFLVEGSTESDLNAGMSWGVKQKEYGALFAANYQKE
ECCCCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCEEEEECCCCC
QGDANFFNGSDADRTKTDMLFKVNAASLLGARSPQQTEFTYQFIDDNSYRSQLGVTTADW
CCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCCEEEEEEECCCCCHHHCCCEECCC
QQDPLLLYSATAQDKHKGRQHKYQLSHQVDLGGSKVISDFYYQSYSQQLAQLGLFNGQEI
CCCCEEEEECCCCHHHCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
DTATLADIAAFDRAPSANGADLNLLVQDNDYSAFGAQTQAINQYGEHQIIYSARYHTDKA
CHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCEEEEEEEEECCCHH
EMRFGEQTALWQADRSLAVDESNALFAYTDDATALTSAIDSLFRWQGMQIKLGLTYEHVS
HHHCCCHHHHHHCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEEEE
VNREVNQPVARLDEADFSDSDWMPQLGVLYDAGDWRFSTDIRRAWTAASAGNTTQEAQVS
CCCHHCCHHHHHCCCCCCCCCCCCCCCEEEECCCCEECHHHHHHHHHCCCCCCCCEEEEE
LHYQVSAQYAREGIKADLRAYVQEFDNLHVDCDSYSMCADARLLTQENIPDVLTYGVELG
EEEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCCCCHHHCCCHHHHCCCCHHHHHHHHCC
LGYRWDLGGVELPLGLNYQYLSAEYQTSTCTDVQGCVLEGDRLAWLPEHQLQLSAGVNYG
CCEEECCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEECCEEEECCCCCEEEECCCCCC
EYQLNLEAAYQSERDFSQFGSELQRVSGQWRVDLAANYDFDKHHRLYFRVENLLDESLVT
EEEEEEEEHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHH
AASNSGIRTENGRISYLGYQWRF
HCCCCCEECCCCEEEEEEEEECC
>Mature Secondary Structure 
SSRYFVMSLTALAVSCVYTHPLKANPLYSQTLDLIELNDQYHSSDDGMQLSYLNSLTLL
CCCEEEEEHHHHHHHHHEECCCCCCCCHHHCEEEEEECCCCCCCCCCEEEEEECCEEEE
RADHSGNTANISMRSASQGVAVMQDRVYFSPAPYSAPQLQLLPNLLLQQNVTSIPLADMT
EECCCCCEEEEEECCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEE
VGGQGAFGVVNYQSLEIANRPQSGSFLVEGSTESDLNAGMSWGVKQKEYGALFAANYQKE
ECCCCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCEEEEECCCCC
QGDANFFNGSDADRTKTDMLFKVNAASLLGARSPQQTEFTYQFIDDNSYRSQLGVTTADW
CCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCCEEEEEEECCCCCHHHCCCEECCC
QQDPLLLYSATAQDKHKGRQHKYQLSHQVDLGGSKVISDFYYQSYSQQLAQLGLFNGQEI
CCCCEEEEECCCCHHHCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
DTATLADIAAFDRAPSANGADLNLLVQDNDYSAFGAQTQAINQYGEHQIIYSARYHTDKA
CHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCEEEEEEEEECCCHH
EMRFGEQTALWQADRSLAVDESNALFAYTDDATALTSAIDSLFRWQGMQIKLGLTYEHVS
HHHCCCHHHHHHCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEEEE
VNREVNQPVARLDEADFSDSDWMPQLGVLYDAGDWRFSTDIRRAWTAASAGNTTQEAQVS
CCCHHCCHHHHHCCCCCCCCCCCCCCCEEEECCCCEECHHHHHHHHHCCCCCCCCEEEEE
LHYQVSAQYAREGIKADLRAYVQEFDNLHVDCDSYSMCADARLLTQENIPDVLTYGVELG
EEEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCCCCHHHCCCHHHHCCCCHHHHHHHHCC
LGYRWDLGGVELPLGLNYQYLSAEYQTSTCTDVQGCVLEGDRLAWLPEHQLQLSAGVNYG
CCEEECCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEECCEEEECCCCCEEEECCCCCC
EYQLNLEAAYQSERDFSQFGSELQRVSGQWRVDLAANYDFDKHHRLYFRVENLLDESLVT
EEEEEEEEHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHH
AASNSGIRTENGRISYLGYQWRF
HCCCCCEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA