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The map label for this gene is slyX [H]

Identifier: 117919352

GI number: 117919352

Start: 1052070

End: 1052282

Strand: Reverse

Name: slyX [H]

Synonym: Shewana3_0901

Alternate gene names: 117919352

Gene position: 1052282-1052070 (Counterclockwise)

Preceding gene: 117919353

Following gene: 117919351

Centisome position: 21.16

GC content: 42.72

Gene sequence:

>213_bases
ATGCAAGGCGTACAAGAACAGATTGAAGAGCTGCAAATGAAATTGGCTTTTCAAGAGCTCACGGTCGAAGAGTTAAACCA
AGAGGTCATTAAGCTGAACCAGCTCATCGCCAATCAGCAACATCAAATTCAGTTATTGATTGGTAAGTTAAAGGCGATGG
AGCCCAGTAATATTGCGACTCAAGCAGAAGAAACACCACCGCCACATTACTAA

Upstream 100 bases:

>100_bases
AGGAGCCGTTGTATACTCTGTGGCAATTCGAGATACCAATAAAGTGGTTAGTATCAGTAGCCAAGGCCTAGTTGAGACTT
GGCAGGAGTAGAGGTTAGTC

Downstream 100 bases:

>100_bases
TTCAATAACGGATAATCCAATCCATTAACGACAATATGACCACTAAATATCCAGGGAATGCGATGTTTAAAGATGAGATG
TTACCAGCCCCCAATCAGCC

Product: SlyX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MQGVQEQIEELQMKLAFQELTVEELNQEVIKLNQLIANQQHQIQLLIGKLKAMEPSNIATQAEETPPPHY

Sequences:

>Translated_70_residues
MQGVQEQIEELQMKLAFQELTVEELNQEVIKLNQLIANQQHQIQLLIGKLKAMEPSNIATQAEETPPPHY
>Mature_70_residues
MQGVQEQIEELQMKLAFQELTVEELNQEVIKLNQLIANQQHQIQLLIGKLKAMEPSNIATQAEETPPPHY

Specific function: Unknown

COG id: COG2900

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the slyX family [H]

Homologues:

Organism=Escherichia coli, GI1789747, Length=68, Percent_Identity=51.4705882352941, Blast_Score=72, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007236 [H]

Pfam domain/function: PF04102 SlyX [H]

EC number: NA

Molecular weight: Translated: 8037; Mature: 8037

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGVQEQIEELQMKLAFQELTVEELNQEVIKLNQLIANQQHQIQLLIGKLKAMEPSNIAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
QAEETPPPHY
CCCCCCCCCC
>Mature Secondary Structure
MQGVQEQIEELQMKLAFQELTVEELNQEVIKLNQLIANQQHQIQLLIGKLKAMEPSNIAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
QAEETPPPHY
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]