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The map label for this gene is 117919350

Identifier: 117919350

GI number: 117919350

Start: 1050067

End: 1051467

Strand: Reverse

Name: 117919350

Synonym: Shewana3_0899

Alternate gene names: NA

Gene position: 1051467-1050067 (Counterclockwise)

Preceding gene: 117919351

Following gene: 117919349

Centisome position: 21.15

GC content: 49.96

Gene sequence:

>1401_bases
ATGAAAACCACCTTCATATACTCTTTTATTAAACCCACACTTAGCACGCTAATGCTCGCCGCCATCTTAGGCTCGAGCGG
CTGTGCCTATAACAGTATTTTTATTAATTATCCGGCACAAATTGCACCGATAAAACAACAGCTCAATACCGCAACGCCCA
TGGCGGATATCGACAAACTAGCCAGCAATATCCAAGGTAATGATGGCCTGCTCTACGCCCAAGAAGCAGGACGTGTAGCG
CAGGTGGCCGGCGATTTTGCCAGCAGCCGTAAGTACTATCAGCAAGCGGTTGAGGCCTATACTGCCTTCGATGATAAAGC
CAAGATTAGCGCCAGCGATATAGGTGCAACGGCCACCAGTTTAGTATTAAACGATAATGCCATTCCCTATCGTGGCCCAG
GCTACGAGCGCATTATGCTGCACCAATATCAAGCCTTGAATTACCTGTTCAGCGGTGACTATCAAGGCGCATTAGTGGAG
GTTCGCCGCAGTAACGAGCTGCAAGGCTCTGAGCAGGAGCGTTATCAAAAGTCACAAAAATCCGTACAGGCCATGGCCAA
TGGCACCATAGATGCCGAAGTGAATAAGCTAGGCCAAGCCGCTGGCACAGTGACCAGCTCCTTCCTCAATGCCTACAGCT
ACTACACTACGGGTCTGTTGCATGAAGTATTAGGTGAGCCAAACGATGCCTTTATCGACTACCGTAAAGCGGCGCAAATC
ACTCCAGATAACACTTATCTGCAACAGGATTTAGTTCGTCTTGCCAAGCAACTCGGCATGCCGCAATACGATGAGTTTAA
AAGGCGCTGGGGCGATGCCAAGCTTCCCAAGGCGGGTGAAGGCCAAGTGATTCTCATGGTCGAAAAGGGCTTTGTACCTG
AAAAACAAGCGCTCACAGTGCCCTTCACTATCCATGGCAATTGGCAAACCGTCTCTTTGGCAACCTATGGACCGAACAAT
AGTTTTGTTGCCGAGGCTCAAGTGCAAGGCTTAGGCTCAGTGCTGAAAACCGAGCCTATCGCCAATATCGATGCCCTAGC
GATTAACGCGCTCAAGGAAGATTTGCCCGGTACTTTGGTTCGCCAAGTCGCGCGGGTGTATGCCAAATCGGAAATGGCCT
ATCAGGTCGAAAAAAGCGGTAAGCCTGGCAATAATGCTGCCGATATTGGCAGTATCGCGATGCAGATTTTTAACGTGGTC
ACCGAGCAGGCGGATCGCCGCAGTTGGTTGACCCTGCCGAAACAGGCGCAAATTGGCAGACGTTACCTCAATCCGGGGCA
ATACACGCTACAGTTGGACAAGGCACCACCGGCCAAAATTGACGTTGCCGCAGGCAAGACCACCTTGGTCTGGGCAATTG
ATACTGGTAATTACACCCGAATTTATTCAATAATCATTTAA

Upstream 100 bases:

>100_bases
TATTTTCCAACATGAGTTTGATCATCTACAAGGGATCACTTTGCTTGAACGCTCTCAAATGCCAGAACAAAAACTAATGG
CAAGAAGGTAAACCACAGGC

Downstream 100 bases:

>100_bases
CCTAGCGGTGAATGTTTGAATAAAACGAGTGTCATTAAGTTTTTACAATCACAAAATGGAACTGACTATGAAACAATTTA
AACTGATTTTTGTGCTGGCT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Lipoprotein; TPR Domain-Containing Protein; Adenine DNA Methylase; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKTTFIYSFIKPTLSTLMLAAILGSSGCAYNSIFINYPAQIAPIKQQLNTATPMADIDKLASNIQGNDGLLYAQEAGRVA
QVAGDFASSRKYYQQAVEAYTAFDDKAKISASDIGATATSLVLNDNAIPYRGPGYERIMLHQYQALNYLFSGDYQGALVE
VRRSNELQGSEQERYQKSQKSVQAMANGTIDAEVNKLGQAAGTVTSSFLNAYSYYTTGLLHEVLGEPNDAFIDYRKAAQI
TPDNTYLQQDLVRLAKQLGMPQYDEFKRRWGDAKLPKAGEGQVILMVEKGFVPEKQALTVPFTIHGNWQTVSLATYGPNN
SFVAEAQVQGLGSVLKTEPIANIDALAINALKEDLPGTLVRQVARVYAKSEMAYQVEKSGKPGNNAADIGSIAMQIFNVV
TEQADRRSWLTLPKQAQIGRRYLNPGQYTLQLDKAPPAKIDVAAGKTTLVWAIDTGNYTRIYSIII

Sequences:

>Translated_466_residues
MKTTFIYSFIKPTLSTLMLAAILGSSGCAYNSIFINYPAQIAPIKQQLNTATPMADIDKLASNIQGNDGLLYAQEAGRVA
QVAGDFASSRKYYQQAVEAYTAFDDKAKISASDIGATATSLVLNDNAIPYRGPGYERIMLHQYQALNYLFSGDYQGALVE
VRRSNELQGSEQERYQKSQKSVQAMANGTIDAEVNKLGQAAGTVTSSFLNAYSYYTTGLLHEVLGEPNDAFIDYRKAAQI
TPDNTYLQQDLVRLAKQLGMPQYDEFKRRWGDAKLPKAGEGQVILMVEKGFVPEKQALTVPFTIHGNWQTVSLATYGPNN
SFVAEAQVQGLGSVLKTEPIANIDALAINALKEDLPGTLVRQVARVYAKSEMAYQVEKSGKPGNNAADIGSIAMQIFNVV
TEQADRRSWLTLPKQAQIGRRYLNPGQYTLQLDKAPPAKIDVAAGKTTLVWAIDTGNYTRIYSIII
>Mature_466_residues
MKTTFIYSFIKPTLSTLMLAAILGSSGCAYNSIFINYPAQIAPIKQQLNTATPMADIDKLASNIQGNDGLLYAQEAGRVA
QVAGDFASSRKYYQQAVEAYTAFDDKAKISASDIGATATSLVLNDNAIPYRGPGYERIMLHQYQALNYLFSGDYQGALVE
VRRSNELQGSEQERYQKSQKSVQAMANGTIDAEVNKLGQAAGTVTSSFLNAYSYYTTGLLHEVLGEPNDAFIDYRKAAQI
TPDNTYLQQDLVRLAKQLGMPQYDEFKRRWGDAKLPKAGEGQVILMVEKGFVPEKQALTVPFTIHGNWQTVSLATYGPNN
SFVAEAQVQGLGSVLKTEPIANIDALAINALKEDLPGTLVRQVARVYAKSEMAYQVEKSGKPGNNAADIGSIAMQIFNVV
TEQADRRSWLTLPKQAQIGRRYLNPGQYTLQLDKAPPAKIDVAAGKTTLVWAIDTGNYTRIYSIII

Specific function: Unknown

COG id: COG3014

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51067; Mature: 51067

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTFIYSFIKPTLSTLMLAAILGSSGCAYNSIFINYPAQIAPIKQQLNTATPMADIDKL
CCCEEEHHHHHHHHHHHHHHHHHCCCCCEECEEEEECCCHHHHHHHHHHCCCCHHHHHHH
ASNIQGNDGLLYAQEAGRVAQVAGDFASSRKYYQQAVEAYTAFDDKAKISASDIGATATS
HHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHCCCCEEE
LVLNDNAIPYRGPGYERIMLHQYQALNYLFSGDYQGALVEVRRSNELQGSEQERYQKSQK
EEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH
SVQAMANGTIDAEVNKLGQAAGTVTSSFLNAYSYYTTGLLHEVLGEPNDAFIDYRKAAQI
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCC
TPDNTYLQQDLVRLAKQLGMPQYDEFKRRWGDAKLPKAGEGQVILMVEKGFVPEKQALTV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
PFTIHGNWQTVSLATYGPNNSFVAEAQVQGLGSVLKTEPIANIDALAINALKEDLPGTLV
EEEEECCEEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHH
RQVARVYAKSEMAYQVEKSGKPGNNAADIGSIAMQIFNVVTEQADRRSWLTLPKQAQIGR
HHHHHHHHHHHHHEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHH
RYLNPGQYTLQLDKAPPAKIDVAAGKTTLVWAIDTGNYTRIYSIII
HHCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MKTTFIYSFIKPTLSTLMLAAILGSSGCAYNSIFINYPAQIAPIKQQLNTATPMADIDKL
CCCEEEHHHHHHHHHHHHHHHHHCCCCCEECEEEEECCCHHHHHHHHHHCCCCHHHHHHH
ASNIQGNDGLLYAQEAGRVAQVAGDFASSRKYYQQAVEAYTAFDDKAKISASDIGATATS
HHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHCCCCEEE
LVLNDNAIPYRGPGYERIMLHQYQALNYLFSGDYQGALVEVRRSNELQGSEQERYQKSQK
EEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH
SVQAMANGTIDAEVNKLGQAAGTVTSSFLNAYSYYTTGLLHEVLGEPNDAFIDYRKAAQI
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCC
TPDNTYLQQDLVRLAKQLGMPQYDEFKRRWGDAKLPKAGEGQVILMVEKGFVPEKQALTV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
PFTIHGNWQTVSLATYGPNNSFVAEAQVQGLGSVLKTEPIANIDALAINALKEDLPGTLV
EEEEECCEEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHH
RQVARVYAKSEMAYQVEKSGKPGNNAADIGSIAMQIFNVVTEQADRRSWLTLPKQAQIGR
HHHHHHHHHHHHHEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHH
RYLNPGQYTLQLDKAPPAKIDVAAGKTTLVWAIDTGNYTRIYSIII
HHCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA