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The map label for this gene is mdoD [H]

Identifier: 117919341

GI number: 117919341

Start: 1034901

End: 1036577

Strand: Direct

Name: mdoD [H]

Synonym: Shewana3_0889

Alternate gene names: 117919341

Gene position: 1034901-1036577 (Clockwise)

Preceding gene: 117919340

Following gene: 117919343

Centisome position: 20.81

GC content: 50.15

Gene sequence:

>1677_bases
ATGCAACCCAATTTATTTCCCGAACAAAGACATTTAAATCGTGAGCCGATGGTGATGCCGTCGGTGGAAGCTCAGTCTAC
CCGTAGCCGTTTACAACGCATGGTGGGCAGTGTGCTACTCACTTGCAGCGTGTTGTTAAGCTTATCTGCTTGTGCAGCGG
GTAAGGCGAGTGCGCCGCAGGAAGAAGAGTTTAGCTACGCCTGGTTGAAAGGCTATGCCCATACGTTGGCGGCTGAGTCC
TATGTGAGCCATAAGGGCGAGTTGCCAAAAAGCTTACAGGGCATGAGCTGGGATGATTACCAGCAGTTTCATTTCAAGAA
AAAAGCCGCCCTGTGGCGTGAGGATGATTCGGAGTTTCGCGCCGAGTTATTCCACTTAGGTCTGTACTTCGATACGCCTG
TGCATATTTACCAATTGGAAAATGGCAAGGCAAAGCTGATCGAATATTCGTCTTCCATGTTCGATTACGGTAAATCCAAG
GTAAAGGGTAGCCAATTACCGAAAGACCTAGGCTTTGCTGGGTTTAGAATGCAGTTTAATACCGACTGGCAGCGTGACGT
GGTCGCCTTCTTAGGGGCCAGCTATTTCCGCGCCGTAGGTCAAGAAATGCAATATGGTCTATCTGCCCGTGGTTTAGCGG
TCGACACTGCGCTGCCTAAGCCTGAAGAATTCCCTATGTTTACCCGTTTCTGGTTAGAGAAACCACAACCGGGTTCTAAT
ATTGCGACTGTGTACGCTCTGTTAGATTCACCAAGTGTAACAGGGGCTTACCGTTTTGATATCGAACCGGGTGAGCGTTT
AAAAATGAAGGTCGATGCGGCGATTTACCCGCGTAAGGCCATCGAACGTTTAGGCGTTGCACCACTGACCAGTATGTACA
TGGTGGGTGAAAACGATCGCCGCACCGGTTACGACTGGCGCCAAGAGATCCACGATTCAGACGGTCTTGCCATGCACACG
GGTAACGGTGAATGGATTTGGCGTCCGCTGGGCAACCCAAGCAACCTGCGTTTCAATGCCTACAGCGATGAGAATCCAAA
GGGCTTTGGTTTAATGCAGCGTGACCGTAACTTCGACCATTATCAAGATGATGGTGTGTTCTACGAGAAGCGTCCAAGCC
TGTGGATTGAGCCAACTGGTAACTGGGGTAAAGGTTCGGTGCAGTTAGTGGAAATTCCAACACTGGATGAAACCTTCGAC
AATATCGTGGCGTTTTGGAACCCTGCTGAGCCCATTCAACCGGGTCAAGAGTTACTCTACAGCTACAACATGTACTGGGG
CGGTATTCCACCCGTGCAGTCACCCCGTGCCCGCGTAGTCGATACCTTTACCGGTATTGGTGGTGTGGTTGGTCAAAAGC
GTAAGTACTATAGCAAGCGCTTTGTGATTGATTTTGCTGGTGGTTCCTTACCTATGCTGGGTAAAGATACCCAAGTGAAA
GCGGTGATTTCGACCTCTCAGGGTCGTGTAGAAATCGAATCTGCTCGCCCACAACATGCGATTAACGGTTACCGCGCTAT
GTTTGACCTAGTGCCGCCAGAAGACAGCGTTGAGCCAATTAACCTCAGAGTTTACTTAGAGGTAGATGGTCAGCCGTTAA
CTGAGACTTGGATGTACCAGTGGACACCACCACCAGTGAACGAGCGTGAGCTGCATAACGCCGGTCATCTGCAGTAA

Upstream 100 bases:

>100_bases
GTTATCACTGTCATCAACAGTTCTCCACAGGGCAGTCACTGCAATATTGCTTACTTTTGCAGAGAAGTGTCAGGAAGTTA
CACCAAATCAGAGTCTGCTT

Downstream 100 bases:

>100_bases
GCCGTGACTCAGTTTTAAATCTTAAAACGCCAGCCCTGTGCTGGCGTTTTTGTTTTGGCCTTAGCTACTTTTTACTCAGT
ATGGTGTTTATACCGCTTGA

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MQPNLFPEQRHLNREPMVMPSVEAQSTRSRLQRMVGSVLLTCSVLLSLSACAAGKASAPQEEEFSYAWLKGYAHTLAAES
YVSHKGELPKSLQGMSWDDYQQFHFKKKAALWREDDSEFRAELFHLGLYFDTPVHIYQLENGKAKLIEYSSSMFDYGKSK
VKGSQLPKDLGFAGFRMQFNTDWQRDVVAFLGASYFRAVGQEMQYGLSARGLAVDTALPKPEEFPMFTRFWLEKPQPGSN
IATVYALLDSPSVTGAYRFDIEPGERLKMKVDAAIYPRKAIERLGVAPLTSMYMVGENDRRTGYDWRQEIHDSDGLAMHT
GNGEWIWRPLGNPSNLRFNAYSDENPKGFGLMQRDRNFDHYQDDGVFYEKRPSLWIEPTGNWGKGSVQLVEIPTLDETFD
NIVAFWNPAEPIQPGQELLYSYNMYWGGIPPVQSPRARVVDTFTGIGGVVGQKRKYYSKRFVIDFAGGSLPMLGKDTQVK
AVISTSQGRVEIESARPQHAINGYRAMFDLVPPEDSVEPINLRVYLEVDGQPLTETWMYQWTPPPVNERELHNAGHLQ

Sequences:

>Translated_558_residues
MQPNLFPEQRHLNREPMVMPSVEAQSTRSRLQRMVGSVLLTCSVLLSLSACAAGKASAPQEEEFSYAWLKGYAHTLAAES
YVSHKGELPKSLQGMSWDDYQQFHFKKKAALWREDDSEFRAELFHLGLYFDTPVHIYQLENGKAKLIEYSSSMFDYGKSK
VKGSQLPKDLGFAGFRMQFNTDWQRDVVAFLGASYFRAVGQEMQYGLSARGLAVDTALPKPEEFPMFTRFWLEKPQPGSN
IATVYALLDSPSVTGAYRFDIEPGERLKMKVDAAIYPRKAIERLGVAPLTSMYMVGENDRRTGYDWRQEIHDSDGLAMHT
GNGEWIWRPLGNPSNLRFNAYSDENPKGFGLMQRDRNFDHYQDDGVFYEKRPSLWIEPTGNWGKGSVQLVEIPTLDETFD
NIVAFWNPAEPIQPGQELLYSYNMYWGGIPPVQSPRARVVDTFTGIGGVVGQKRKYYSKRFVIDFAGGSLPMLGKDTQVK
AVISTSQGRVEIESARPQHAINGYRAMFDLVPPEDSVEPINLRVYLEVDGQPLTETWMYQWTPPPVNERELHNAGHLQ
>Mature_558_residues
MQPNLFPEQRHLNREPMVMPSVEAQSTRSRLQRMVGSVLLTCSVLLSLSACAAGKASAPQEEEFSYAWLKGYAHTLAAES
YVSHKGELPKSLQGMSWDDYQQFHFKKKAALWREDDSEFRAELFHLGLYFDTPVHIYQLENGKAKLIEYSSSMFDYGKSK
VKGSQLPKDLGFAGFRMQFNTDWQRDVVAFLGASYFRAVGQEMQYGLSARGLAVDTALPKPEEFPMFTRFWLEKPQPGSN
IATVYALLDSPSVTGAYRFDIEPGERLKMKVDAAIYPRKAIERLGVAPLTSMYMVGENDRRTGYDWRQEIHDSDGLAMHT
GNGEWIWRPLGNPSNLRFNAYSDENPKGFGLMQRDRNFDHYQDDGVFYEKRPSLWIEPTGNWGKGSVQLVEIPTLDETFD
NIVAFWNPAEPIQPGQELLYSYNMYWGGIPPVQSPRARVVDTFTGIGGVVGQKRKYYSKRFVIDFAGGSLPMLGKDTQVK
AVISTSQGRVEIESARPQHAINGYRAMFDLVPPEDSVEPINLRVYLEVDGQPLTETWMYQWTPPPVNERELHNAGHLQ

Specific function: Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family [H]

Homologues:

Organism=Escherichia coli, GI145693128, Length=523, Percent_Identity=43.7858508604207, Blast_Score=424, Evalue=1e-120,
Organism=Escherichia coli, GI1787286, Length=518, Percent_Identity=40.7335907335907, Blast_Score=378, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04349 MdoG [H]

EC number: NA

Molecular weight: Translated: 63400; Mature: 63400

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPNLFPEQRHLNREPMVMPSVEAQSTRSRLQRMVGSVLLTCSVLLSLSACAAGKASAPQ
CCCCCCCHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EEEFSYAWLKGYAHTLAAESYVSHKGELPKSLQGMSWDDYQQFHFKKKAALWREDDSEFR
HHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH
AELFHLGLYFDTPVHIYQLENGKAKLIEYSSSMFDYGKSKVKGSQLPKDLGFAGFRMQFN
HHHHHEEEEECCCEEEEEECCCCEEEEEEHHHHHHHCHHHCCCCCCCHHHCCCEEEEEEC
TDWQRDVVAFLGASYFRAVGQEMQYGLSARGLAVDTALPKPEEFPMFTRFWLEKPQPGSN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCC
IATVYALLDSPSVTGAYRFDIEPGERLKMKVDAAIYPRKAIERLGVAPLTSMYMVGENDR
EEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCEEEEECCCCC
RTGYDWRQEIHDSDGLAMHTGNGEWIWRPLGNPSNLRFNAYSDENPKGFGLMQRDRNFDH
CCCCHHHHHHCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCCCHHCCCCCCC
YQDDGVFYEKRPSLWIEPTGNWGKGSVQLVEIPTLDETFDNIVAFWNPAEPIQPGQELLY
CCCCCEEEECCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHEEECCCCCCCCHHHHHHH
SYNMYWGGIPPVQSPRARVVDTFTGIGGVVGQKRKYYSKRFVIDFAGGSLPMLGKDTQVK
HHCCEECCCCCCCCCCHHHHHHHHCCCHHHCCHHHHCCCEEEEEECCCCCCCCCCCCEEE
AVISTSQGRVEIESARPQHAINGYRAMFDLVPPEDSVEPINLRVYLEVDGQPLTETWMYQ
EEEECCCCEEEEECCCCCHHHHHHHHEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEEE
WTPPPVNERELHNAGHLQ
ECCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MQPNLFPEQRHLNREPMVMPSVEAQSTRSRLQRMVGSVLLTCSVLLSLSACAAGKASAPQ
CCCCCCCHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EEEFSYAWLKGYAHTLAAESYVSHKGELPKSLQGMSWDDYQQFHFKKKAALWREDDSEFR
HHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH
AELFHLGLYFDTPVHIYQLENGKAKLIEYSSSMFDYGKSKVKGSQLPKDLGFAGFRMQFN
HHHHHEEEEECCCEEEEEECCCCEEEEEEHHHHHHHCHHHCCCCCCCHHHCCCEEEEEEC
TDWQRDVVAFLGASYFRAVGQEMQYGLSARGLAVDTALPKPEEFPMFTRFWLEKPQPGSN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCC
IATVYALLDSPSVTGAYRFDIEPGERLKMKVDAAIYPRKAIERLGVAPLTSMYMVGENDR
EEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCEEEEECCCCC
RTGYDWRQEIHDSDGLAMHTGNGEWIWRPLGNPSNLRFNAYSDENPKGFGLMQRDRNFDH
CCCCHHHHHHCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCCCHHCCCCCCC
YQDDGVFYEKRPSLWIEPTGNWGKGSVQLVEIPTLDETFDNIVAFWNPAEPIQPGQELLY
CCCCCEEEECCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHEEECCCCCCCCHHHHHHH
SYNMYWGGIPPVQSPRARVVDTFTGIGGVVGQKRKYYSKRFVIDFAGGSLPMLGKDTQVK
HHCCEECCCCCCCCCCHHHHHHHHCCCHHHCCHHHHCCCEEEEEECCCCCCCCCCCCEEE
AVISTSQGRVEIESARPQHAINGYRAMFDLVPPEDSVEPINLRVYLEVDGQPLTETWMYQ
EEEECCCCEEEEECCCCCHHHHHHHHEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEEE
WTPPPVNERELHNAGHLQ
ECCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]