Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is artP [H]
Identifier: 117919334
GI number: 117919334
Start: 1028163
End: 1028897
Strand: Reverse
Name: artP [H]
Synonym: Shewana3_0882
Alternate gene names: 117919334
Gene position: 1028897-1028163 (Counterclockwise)
Preceding gene: 117919336
Following gene: 117919333
Centisome position: 20.69
GC content: 47.76
Gene sequence:
>735_bases ATGAAAAAATCCATGTTATTAGGCGGCCTAGCCCTCACTGCCACCTTGTTGTTAGCTGGATGTGGGAAAAGCAACGATAT TTTAGTGGTTGGCACCAATGCGGCCTTCCCGCCCTTTGAATACGTTGGCGGACAAAGTGGCGACGAGATCAAAGGCTTCG ACATTGAGCTTGCCAAACGAATCGCTAAAGATGCCGGCAAGACGCTCAAAGTCGAGAATATGAAATTCGATTCACTGATC GTGGCGCTAAACTCAGGCAAGATTGATTTTATCGCCTCGGGCATGACCATCACCCCGGAGCGTCAGGCCAGCGTTAACTT TTCGGAGCCCTACTATGAGGCGACTCAAGTGCTGCTCGTGAATAAAGATAACGACACCATTCATACCCTTGATGACATTA AAGACAAACACTTTGCAGTGCAGCTCGGCTCAACCGCCGATATGATGTCTAAAAAATACACCCAAAATGTCACCGCCTTT AACACCGGCTTCGAAGCCATCATGGAACTGAAGAATGGCAAAGTCGACTTAGTGCTATTCGATAGCGAGCCTGCGGCGAA CTATCTGGCGAAAAACCCCGATCTCAAACTGATCAAGCTGGACTTCCCCCCAGAGTTTTATGGCTTTGCAGTGTCAAAGC AGCAGCCTGAACTTCTCAATAGCATTAATAACACGCTGAAAAACTTGAAAGAAAGCGGCCAATATCAGACGCTCGTTTCA GCCCATATCAAGTGA
Upstream 100 bases:
>100_bases TGATATGCATTTTTAATCATTTTTAAAGCATAATTATTGAAATAAGAGCGTCGCATCCCTATAGTCGCCACATTGCGAGT CATTCAAAAGAGAGTCTTAA
Downstream 100 bases:
>100_bases TCCCTATGTTAGAAGCAATCAATACTTCGCTGTTTAGCCCGATTGGCGACGACGGCATGATAGGCATACTGCTGATCCTA AACGGCTTAAAAGTCACCTT
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKKSMLLGGLALTATLLLAGCGKSNDILVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKRIAKDAGKTLKVENMKFDSLI VALNSGKIDFIASGMTITPERQASVNFSEPYYEATQVLLVNKDNDTIHTLDDIKDKHFAVQLGSTADMMSKKYTQNVTAF NTGFEAIMELKNGKVDLVLFDSEPAANYLAKNPDLKLIKLDFPPEFYGFAVSKQQPELLNSINNTLKNLKESGQYQTLVS AHIK
Sequences:
>Translated_244_residues MKKSMLLGGLALTATLLLAGCGKSNDILVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKRIAKDAGKTLKVENMKFDSLI VALNSGKIDFIASGMTITPERQASVNFSEPYYEATQVLLVNKDNDTIHTLDDIKDKHFAVQLGSTADMMSKKYTQNVTAF NTGFEAIMELKNGKVDLVLFDSEPAANYLAKNPDLKLIKLDFPPEFYGFAVSKQQPELLNSINNTLKNLKESGQYQTLVS AHIK >Mature_244_residues MKKSMLLGGLALTATLLLAGCGKSNDILVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKRIAKDAGKTLKVENMKFDSLI VALNSGKIDFIASGMTITPERQASVNFSEPYYEATQVLLVNKDNDTIHTLDDIKDKHFAVQLGSTADMMSKKYTQNVTAF NTGFEAIMELKNGKVDLVLFDSEPAANYLAKNPDLKLIKLDFPPEFYGFAVSKQQPELLNSINNTLKNLKESGQYQTLVS AHIK
Specific function: Part of a binding-protein-dependent transport system for arginine [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=247, Percent_Identity=34.8178137651822, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI1787088, Length=248, Percent_Identity=30.241935483871, Blast_Score=113, Evalue=9e-27, Organism=Escherichia coli, GI1787031, Length=241, Percent_Identity=31.1203319502075, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1788228, Length=220, Percent_Identity=29.0909090909091, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1788648, Length=227, Percent_Identity=25.9911894273128, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1788649, Length=255, Percent_Identity=27.0588235294118, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 26694; Mature: 26694
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSMLLGGLALTATLLLAGCGKSNDILVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKR CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHH IAKDAGKTLKVENMKFDSLIVALNSGKIDFIASGMTITPERQASVNFSEPYYEATQVLLV HHHHCCCEEEEECEEECEEEEEEECCCEEEEECCCEECCCCCCCCCCCCCCCCEEEEEEE NKDNDTIHTLDDIKDKHFAVQLGSTADMMSKKYTQNVTAFNTGFEAIMELKNGKVDLVLF ECCCCCEEEHHHCCCCEEEEEECCHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCEEEEEE DSEPAANYLAKNPDLKLIKLDFPPEFYGFAVSKQQPELLNSINNTLKNLKESGQYQTLVS CCCCCHHHHHCCCCEEEEEECCCCHHHEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE AHIK ECCC >Mature Secondary Structure MKKSMLLGGLALTATLLLAGCGKSNDILVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKR CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHH IAKDAGKTLKVENMKFDSLIVALNSGKIDFIASGMTITPERQASVNFSEPYYEATQVLLV HHHHCCCEEEEECEEECEEEEEEECCCEEEEECCCEECCCCCCCCCCCCCCCCEEEEEEE NKDNDTIHTLDDIKDKHFAVQLGSTADMMSKKYTQNVTAFNTGFEAIMELKNGKVDLVLF ECCCCCEEEHHHCCCCEEEEEECCHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCEEEEEE DSEPAANYLAKNPDLKLIKLDFPPEFYGFAVSKQQPELLNSINNTLKNLKESGQYQTLVS CCCCCHHHHHCCCCEEEEEECCCCHHHEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE AHIK ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]