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The map label for this gene is glnP [H]

Identifier: 117919333

GI number: 117919333

Start: 1027477

End: 1028157

Strand: Reverse

Name: glnP [H]

Synonym: Shewana3_0881

Alternate gene names: 117919333

Gene position: 1028157-1027477 (Counterclockwise)

Preceding gene: 117919334

Following gene: 117919332

Centisome position: 20.68

GC content: 48.02

Gene sequence:

>681_bases
ATGTTAGAAGCAATCAATACTTCGCTGTTTAGCCCGATTGGCGACGACGGCATGATAGGCATACTGCTGATCCTAAACGG
CTTAAAAGTCACCTTGATTGTGACCTTCTTCGCCATGTTATTAGGCGCAGTATTAGGCGTGGGTACCACACTGATGAAGA
TGTCATCAAAGTGGTATATCCGCTTCCCCGCCGAGCTTTATGTTGGCGTGATCCGCGGTACGCCAGTGGTGGTGCAGTTA
GTGATCCTTTACTTCATCGTGCTGGCCGCATTCGATGTCGATAAGGTCACCGCTGCCATCATCGCCTTTGGTTTAAACAG
CGGCGCTTATATCTCTGAGATTATTCGCGCAGGAATTCAAGCCGTTGATAAAGGTCAAACCGAAGCGGCACGCTCACTCG
GCCTGTCGCAGGCGATGACCATGAAGCTAATTATTCTGCCGCAGGCGATTAAGAATATTCTGCCCGCGTTAGGTAATGAG
TTTATCGTGCTACTCAAAGAAACCGCCGTAATTGGCTTTATTGGCGGCGTGGATTTAATGCGGGCGGGTGAGATTATTCG
CAGCCGTACTTTTGAAGACAGTATCCCACTCTTTACCTGTGCACTGATTTACCTGTTCCTGACCTACAGCTTCACATTTA
TGCTGTCGAAATTCGAAAAGAGGTTGAAGCAAAGTGATTAA

Upstream 100 bases:

>100_bases
AGCAGCCTGAACTTCTCAATAGCATTAATAACACGCTGAAAAACTTGAAAGAAAGCGGCCAATATCAGACGCTCGTTTCA
GCCCATATCAAGTGATCCCT

Downstream 100 bases:

>100_bases
CATAACCAACCTACACAAAAGTTACGGCGATAATGCTGTTCTTAAGGGCATCAACGAACATATTCGCCAAGGCGAAGTGG
TGAGTGTTATCGGCCCTAGC

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MLEAINTSLFSPIGDDGMIGILLILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYIRFPAELYVGVIRGTPVVVQL
VILYFIVLAAFDVDKVTAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNE
FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSIPLFTCALIYLFLTYSFTFMLSKFEKRLKQSD

Sequences:

>Translated_226_residues
MLEAINTSLFSPIGDDGMIGILLILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYIRFPAELYVGVIRGTPVVVQL
VILYFIVLAAFDVDKVTAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNE
FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSIPLFTCALIYLFLTYSFTFMLSKFEKRLKQSD
>Mature_226_residues
MLEAINTSLFSPIGDDGMIGILLILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYIRFPAELYVGVIRGTPVVVQL
VILYFIVLAAFDVDKVTAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNE
FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSIPLFTCALIYLFLTYSFTFMLSKFEKRLKQSD

Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=204, Percent_Identity=35.2941176470588, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1787030, Length=207, Percent_Identity=35.7487922705314, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1786873, Length=207, Percent_Identity=32.3671497584541, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1788645, Length=213, Percent_Identity=32.8638497652582, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1788646, Length=220, Percent_Identity=30, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1787087, Length=200, Percent_Identity=29, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI87082239, Length=204, Percent_Identity=30.3921568627451, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI48994930, Length=132, Percent_Identity=31.8181818181818, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786874, Length=191, Percent_Identity=24.0837696335079, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=25.3521126760563, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24641; Mature: 24641

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEAINTSLFSPIGDDGMIGILLILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYI
CCCHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
RFPAELYVGVIRGTPVVVQLVILYFIVLAAFDVDKVTAAIIAFGLNSGAYISEIIRAGIQ
EECHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AVDKGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLM
HHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCHHHH
RAGEIIRSRTFEDSIPLFTCALIYLFLTYSFTFMLSKFEKRLKQSD
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLEAINTSLFSPIGDDGMIGILLILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYI
CCCHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
RFPAELYVGVIRGTPVVVQLVILYFIVLAAFDVDKVTAAIIAFGLNSGAYISEIIRAGIQ
EECHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AVDKGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLM
HHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCHHHH
RAGEIIRSRTFEDSIPLFTCALIYLFLTYSFTFMLSKFEKRLKQSD
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]