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The map label for this gene is 117919267

Identifier: 117919267

GI number: 117919267

Start: 943094

End: 944707

Strand: Direct

Name: 117919267

Synonym: Shewana3_0815

Alternate gene names: NA

Gene position: 943094-944707 (Clockwise)

Preceding gene: 117919266

Following gene: 117919270

Centisome position: 18.97

GC content: 54.03

Gene sequence:

>1614_bases
ATGGCCGCTCCCGCTATCTCTATCCGTAACCTCGACCACCTTGGTTTGGTCGCTGCACTTTGCCAAGAACTCGGCATTGC
TCGCATGATTGATGCGGTGCTACCCAAAACGCCGCCCTACAAAGTCTCACATGGTGAAGCGTTGGTGGCGATGATACTGA
ACGGTCTTGGCTTTCATAGTTCGACCTTGCACATGTTCCCGCAATTCTTTGCCAACAAGCCTGTAGAACGCCTGATTGGC
CCGGGGATCTGTGCCGATGACCTCAATGATGATGTGCTCGGCCGCTGCCTTGATGCCCTCTTTGAGGCCGATGTCAGCAC
GCTTTATCAGGTGATGGCGGAGCAGGTCGTTGAACGATTGGGGCTCAAAAGTACTGCAGTACACCTCGATATCACCAGCT
TCCACGTCGATGGCGCCTATGACCAAGCCGATGGCGAGCAGCTCGGTAAGTTGCAATTGGTACGGGGCTATAGCCGCGAC
CATCGGCCAGAGCTAAACCAGGTTATCCTGGAGCTTATCTGTGAAAATCAGGCCGGCCTGCCCATCTACATGCAAGCCTT
GAGTGGTAATATTAATGATACCAAGGCCTTTGCCCAGACGGTACGGCGCCACTTGAGCAGTCTCAAGGCCGCGCAGGAGA
GTCGTTATCTGGTCGGCGATGCGGCGCTGTATTGCGCCGACACCTTGCAACTACTGGCACAACAGCAACAGTTGTTCGTG
ACTCGTGTGCCTGTCACCCTCAATGAAGCCAAGCGAGCCGTGGCAACCATTGGCACCCAGTCGCTGGTTGCGCTGGGCAA
TGGCTATCATGGCTGTTGGCAAAGCGCCAATTATGCCGACGTCGCGCAGCGTTGGTTGCTGGTGCGCAGCGAACAGGCCA
GCCACCGTGAGCAGCAAACATTAGCCAAAAACCTACTGAAAGACAGCACGCGTGAACTGAAAGCCTTCAACAAATTATGT
GCCCAGCGTTTTGCCTGCGAGACCGATGCGCAGGCTGAATTAGCCCGTTTTGCTGTCAGCTTAAATCTGCTGCAACTAGA
AGCAGAAGTCGTGAGTGAACCTATCTATGCAGGGCGCGGAAGGCCCCAAAAGGGTGAAATGCCGGTGAACTACCAATTTC
ACATCAAGGGGTTAGCCGCAAGTAGCTTGGCGCGGGTGGCTGAGGCGCGCAACCAGACAGGGGTGTTCATCCTCGCGACC
AATGATCACAGTGAAACGCTCACCATGGCTGAGCTGTTGGCTACCTATAAAGCCCAGCAGAATGTCGAGCGTGGTTTTAG
GTTTCTGAAAAGTCCCGAATTTTTAACCTCCTCGTTATATCTTAAAAAACCGGAACGTATCGAAGCGTTGCTGATGGTGA
TGACCTGTAGCCTGATGATTTATGCGGCGCTGGAGCACCGGATCCGGCAGGGCTTAGTAGAGCAGAACCGGAGTGTGGCG
GACATGAAAAAGAAACCCACGCAAAAACCGACTGCGCGGTGGATTTTTTTACGCTTTGGCGGGGTGCACGAGTACCAGTT
GGGAGAGGCGCCACCTCAAGTCACAGGACTCACAGTGGACCAGCAGATCATTCTCGACGTGTTAGGCGAACGGTATCGGC
AAATTTATTCCTAA

Upstream 100 bases:

>100_bases
GCAGTTACAGATCCGTCATTCCGCACCTAATTTTCGATTTAAAAAACTTGACGGCGATCGGTCATTCTGATCTATTACTC
TCTTTTGCAGGTAATTCATC

Downstream 100 bases:

>100_bases
ATCAGGTGCGGAAAGTCGGACAGATGGCTATACAAGGATAAGCGAGGCATCCCAAGTCCATTTGGGGATGGATCGATACA
AGGCGCAGCGGCTTATCTTC

Product: IS4 family transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase-Like Protein

Number of amino acids: Translated: 537; Mature: 536

Protein sequence:

>537_residues
MAAPAISIRNLDHLGLVAALCQELGIARMIDAVLPKTPPYKVSHGEALVAMILNGLGFHSSTLHMFPQFFANKPVERLIG
PGICADDLNDDVLGRCLDALFEADVSTLYQVMAEQVVERLGLKSTAVHLDITSFHVDGAYDQADGEQLGKLQLVRGYSRD
HRPELNQVILELICENQAGLPIYMQALSGNINDTKAFAQTVRRHLSSLKAAQESRYLVGDAALYCADTLQLLAQQQQLFV
TRVPVTLNEAKRAVATIGTQSLVALGNGYHGCWQSANYADVAQRWLLVRSEQASHREQQTLAKNLLKDSTRELKAFNKLC
AQRFACETDAQAELARFAVSLNLLQLEAEVVSEPIYAGRGRPQKGEMPVNYQFHIKGLAASSLARVAEARNQTGVFILAT
NDHSETLTMAELLATYKAQQNVERGFRFLKSPEFLTSSLYLKKPERIEALLMVMTCSLMIYAALEHRIRQGLVEQNRSVA
DMKKKPTQKPTARWIFLRFGGVHEYQLGEAPPQVTGLTVDQQIILDVLGERYRQIYS

Sequences:

>Translated_537_residues
MAAPAISIRNLDHLGLVAALCQELGIARMIDAVLPKTPPYKVSHGEALVAMILNGLGFHSSTLHMFPQFFANKPVERLIG
PGICADDLNDDVLGRCLDALFEADVSTLYQVMAEQVVERLGLKSTAVHLDITSFHVDGAYDQADGEQLGKLQLVRGYSRD
HRPELNQVILELICENQAGLPIYMQALSGNINDTKAFAQTVRRHLSSLKAAQESRYLVGDAALYCADTLQLLAQQQQLFV
TRVPVTLNEAKRAVATIGTQSLVALGNGYHGCWQSANYADVAQRWLLVRSEQASHREQQTLAKNLLKDSTRELKAFNKLC
AQRFACETDAQAELARFAVSLNLLQLEAEVVSEPIYAGRGRPQKGEMPVNYQFHIKGLAASSLARVAEARNQTGVFILAT
NDHSETLTMAELLATYKAQQNVERGFRFLKSPEFLTSSLYLKKPERIEALLMVMTCSLMIYAALEHRIRQGLVEQNRSVA
DMKKKPTQKPTARWIFLRFGGVHEYQLGEAPPQVTGLTVDQQIILDVLGERYRQIYS
>Mature_536_residues
AAPAISIRNLDHLGLVAALCQELGIARMIDAVLPKTPPYKVSHGEALVAMILNGLGFHSSTLHMFPQFFANKPVERLIGP
GICADDLNDDVLGRCLDALFEADVSTLYQVMAEQVVERLGLKSTAVHLDITSFHVDGAYDQADGEQLGKLQLVRGYSRDH
RPELNQVILELICENQAGLPIYMQALSGNINDTKAFAQTVRRHLSSLKAAQESRYLVGDAALYCADTLQLLAQQQQLFVT
RVPVTLNEAKRAVATIGTQSLVALGNGYHGCWQSANYADVAQRWLLVRSEQASHREQQTLAKNLLKDSTRELKAFNKLCA
QRFACETDAQAELARFAVSLNLLQLEAEVVSEPIYAGRGRPQKGEMPVNYQFHIKGLAASSLARVAEARNQTGVFILATN
DHSETLTMAELLATYKAQQNVERGFRFLKSPEFLTSSLYLKKPERIEALLMVMTCSLMIYAALEHRIRQGLVEQNRSVAD
MKKKPTQKPTARWIFLRFGGVHEYQLGEAPPQVTGLTVDQQIILDVLGERYRQIYS

Specific function: Unknown

COG id: COG5421

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59664; Mature: 59533

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPAISIRNLDHLGLVAALCQELGIARMIDAVLPKTPPYKVSHGEALVAMILNGLGFHS
CCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
STLHMFPQFFANKPVERLIGPGICADDLNDDVLGRCLDALFEADVSTLYQVMAEQVVERL
HHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLKSTAVHLDITSFHVDGAYDQADGEQLGKLQLVRGYSRDHRPELNQVILELICENQAGL
CCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
PIYMQALSGNINDTKAFAQTVRRHLSSLKAAQESRYLVGDAALYCADTLQLLAQQQQLFV
CEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHH
TRVPVTLNEAKRAVATIGTQSLVALGNGYHGCWQSANYADVAQRWLLVRSEQASHREQQT
HCCCEEHHHHHHHHHHHCHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHH
LAKNLLKDSTRELKAFNKLCAQRFACETDAQAELARFAVSLNLLQLEAEVVSEPIYAGRG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
RPQKGEMPVNYQFHIKGLAASSLARVAEARNQTGVFILATNDHSETLTMAELLATYKAQQ
CCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
NVERGFRFLKSPEFLTSSLYLKKPERIEALLMVMTCSLMIYAALEHRIRQGLVEQNRSVA
HHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
DMKKKPTQKPTARWIFLRFGGVHEYQLGEAPPQVTGLTVDQQIILDVLGERYRQIYS
HHHHCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAPAISIRNLDHLGLVAALCQELGIARMIDAVLPKTPPYKVSHGEALVAMILNGLGFHS
CCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
STLHMFPQFFANKPVERLIGPGICADDLNDDVLGRCLDALFEADVSTLYQVMAEQVVERL
HHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLKSTAVHLDITSFHVDGAYDQADGEQLGKLQLVRGYSRDHRPELNQVILELICENQAGL
CCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
PIYMQALSGNINDTKAFAQTVRRHLSSLKAAQESRYLVGDAALYCADTLQLLAQQQQLFV
CEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHH
TRVPVTLNEAKRAVATIGTQSLVALGNGYHGCWQSANYADVAQRWLLVRSEQASHREQQT
HCCCEEHHHHHHHHHHHCHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHH
LAKNLLKDSTRELKAFNKLCAQRFACETDAQAELARFAVSLNLLQLEAEVVSEPIYAGRG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
RPQKGEMPVNYQFHIKGLAASSLARVAEARNQTGVFILATNDHSETLTMAELLATYKAQQ
CCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
NVERGFRFLKSPEFLTSSLYLKKPERIEALLMVMTCSLMIYAALEHRIRQGLVEQNRSVA
HHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
DMKKKPTQKPTARWIFLRFGGVHEYQLGEAPPQVTGLTVDQQIILDVLGERYRQIYS
HHHHCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA