Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919266
Identifier: 117919266
GI number: 117919266
Start: 942422
End: 943063
Strand: Direct
Name: 117919266
Synonym: Shewana3_0814
Alternate gene names: NA
Gene position: 942422-943063 (Clockwise)
Preceding gene: 117919265
Following gene: 117919267
Centisome position: 18.95
GC content: 46.88
Gene sequence:
>642_bases ATGAATAACCCTATGCAAGCAGATCCAGCACCAAAAGAATTAGCCCCGCAAATTAACGCCCATTTTAACGGCAAGTTTGA GGTAGAGCTTAAGTATCGACTCACAGACCGCGAGGCTTTTTGGGCGCGCTTAAGCGCTAAATCACCCGAGGTGATGCTCG AGGATAATCTTGAGCATGACTGCTATTTTGATTCACCTATAGCCTCCTTAGCGGCTGAGCATAAAAGCCTGTGTATTCGC GAGATGCAGCCCTCCGGCATCATGCTGTGGATTGTGAAAGGGCCCGAGAAAGACCGCTGTGAGGCGGTCAATATTACGGA TGCCAACAAAGCCAAAAGTATGCTACGGACTTTAGGGTATCAATGTGTGCTTGAGATTAAAAAACGCCGCAGCGTGTATT TTCTTGGGGAATTTCATTTAACGCTTGATTGGCTCGAAGGCTTAGGTGACTTTGCCGAGCTTGCAATCATGACTAATGAT GAAGCTAAGCTGCCAATCTATGAAGCACAGCTCCTCGCCTTAGCAGCAGAACTTGGGCTGGAGGAATCACAACGGGAATT CTTATCTTACAGGCAGTTACAGATCCGTCATTCCGCACCTAATTTTCGATTTAAAAAACTTGACGGCGATCGGTCATTCT GA
Upstream 100 bases:
>100_bases CTGCAAACTTGTCCCGCCTATCAGGCGCTCTATCGTCGCTTAGCTTGAGTCAGGATGTCGATTGGGTGAGAAATATGTGC AGCAGGAGTAAAGCCGTTAG
Downstream 100 bases:
>100_bases TCTATTACTCTCTTTTGCAGGTAATTCATCATGGCCGCTCCCGCTATCTCTATCCGTAACCTCGACCACCTTGGTTTGGT CGCTGCACTTTGCCAAGAAC
Product: putative adenylyl cyclase CyaB
Products: 3',5'-cyclic AMP; diphosphate
Alternate protein names: Adenylate Cyclase; Adenylate Cyclase CyaB
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MNNPMQADPAPKELAPQINAHFNGKFEVELKYRLTDREAFWARLSAKSPEVMLEDNLEHDCYFDSPIASLAAEHKSLCIR EMQPSGIMLWIVKGPEKDRCEAVNITDANKAKSMLRTLGYQCVLEIKKRRSVYFLGEFHLTLDWLEGLGDFAELAIMTND EAKLPIYEAQLLALAAELGLEESQREFLSYRQLQIRHSAPNFRFKKLDGDRSF
Sequences:
>Translated_213_residues MNNPMQADPAPKELAPQINAHFNGKFEVELKYRLTDREAFWARLSAKSPEVMLEDNLEHDCYFDSPIASLAAEHKSLCIR EMQPSGIMLWIVKGPEKDRCEAVNITDANKAKSMLRTLGYQCVLEIKKRRSVYFLGEFHLTLDWLEGLGDFAELAIMTND EAKLPIYEAQLLALAAELGLEESQREFLSYRQLQIRHSAPNFRFKKLDGDRSF >Mature_213_residues MNNPMQADPAPKELAPQINAHFNGKFEVELKYRLTDREAFWARLSAKSPEVMLEDNLEHDCYFDSPIASLAAEHKSLCIR EMQPSGIMLWIVKGPEKDRCEAVNITDANKAKSMLRTLGYQCVLEIKKRRSVYFLGEFHLTLDWLEGLGDFAELAIMTND EAKLPIYEAQLLALAAELGLEESQREFLSYRQLQIRHSAPNFRFKKLDGDRSF
Specific function: Unknown
COG id: COG1437
COG function: function code F; Adenylate cyclase, class 2 (thermophilic)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.6.1.1
Molecular weight: Translated: 24470; Mature: 24470
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNPMQADPAPKELAPQINAHFNGKFEVELKYRLTDREAFWARLSAKSPEVMLEDNLEHD CCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCCEEEECCCCCC CYFDSPIASLAAEHKSLCIREMQPSGIMLWIVKGPEKDRCEAVNITDANKAKSMLRTLGY CEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEECCCCCHHHHHHHHHHHH QCVLEIKKRRSVYFLGEFHLTLDWLEGLGDFAELAIMTNDEAKLPIYEAQLLALAAELGL HHHHHHHHCCCEEEEEEEEEHHHHHHCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHCC EESQREFLSYRQLQIRHSAPNFRFKKLDGDRSF CHHHHHHHHHHHHEEEECCCCCEEEECCCCCCC >Mature Secondary Structure MNNPMQADPAPKELAPQINAHFNGKFEVELKYRLTDREAFWARLSAKSPEVMLEDNLEHD CCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCCEEEECCCCCC CYFDSPIASLAAEHKSLCIREMQPSGIMLWIVKGPEKDRCEAVNITDANKAKSMLRTLGY CEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEECCCCCHHHHHHHHHHHH QCVLEIKKRRSVYFLGEFHLTLDWLEGLGDFAELAIMTNDEAKLPIYEAQLLALAAELGL HHHHHHHHCCCEEEEEEEEEHHHHHHCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHCC EESQREFLSYRQLQIRHSAPNFRFKKLDGDRSF CHHHHHHHHHHHHEEEECCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP
Specific reaction: ATP = 3',5'-cyclic AMP + diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA