Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919263
Identifier: 117919263
GI number: 117919263
Start: 937366
End: 938412
Strand: Direct
Name: 117919263
Synonym: Shewana3_0811
Alternate gene names: NA
Gene position: 937366-938412 (Clockwise)
Preceding gene: 117919261
Following gene: 117919264
Centisome position: 18.85
GC content: 52.24
Gene sequence:
>1047_bases ATGACAGCAATACAGCATATTGAACGCCTCGCTCGTAGCCGAAGTGAACAGGCCGTGGCGGTTATTCGAAACGTGCAGCA GATGTCCAACATTCCCATGCAGGAGATGCAAGCGGCGCTGAAGCAATTGTTACACTGTGGCCGAGTCGCACTGCATTTTC ATCCCGACAGAATCGATAGCCGCGGTATCACAGTGGCCGAAGGATTATTGCGTGATGGTCAATACCGCAGCCAATTCGAA ACCCATATCTCCAACGGGCAGTTATCCCCCGAGTTAGGTGGGCCAAGGGATCATTGGGAAAATCAACTCTTTGGCGATGC TTACAAGGGGACTAAGTCTCGGCCTAAGTATGGTGCCTTGGATTTAGGCATGTGGCAGGATGGTCCAGCCCCACGTTTTG GCAGCTGTTATTTGCTAACCCACTCGCAGTTGCTCACGCGCTCGACCTTCACTTATTTAGATTCCTACCGTAACCCTAAG GAAAAGGGCACCTTATCCTGTTTTGATGATGTATTGGCGGCGCTGCTCACCGAGAGTTTTGAGCGCCACTATGCCTTGGG TAAAGTGGATTTTAAGCCGCTAAACGTGATCCAATATTTGGCGCATCAACTGAACTCCTCCCTGCTGTCGCGCTTTGAAC GGCCGATGTCGACGAATCTCGACCATTATATTGAGGCGCAGATCCACGGTGATGTGTCCCTCGATGAAGATATTGCCATG TTGGTGGCAGATCCGAGTTTTAAAGGGACTGAAATCGGTGCCACCTTAAGCAAGCTCTGCGATCGCTATGATATCGAGCT GCAATACCATAATGGCTTTAGCCTGCACACGGCGCAGATCCCCAGTGATTTCCGTGGCCCGACTATGCCATCTTTGGCGA GTCGCATCGCTATCGATGAGCGTGTCGATGCCTATGCCATTGGCGTGGCGGCGCGGGATTTGTACCATTCGCCCCAACAT TGGCGCCATCGGGGGAATCGCGCTCAGGTGGCACACGAACTCAAGCTGCTCTGGCATGTGTTAGTCAAATACGGCGCTCA GCAATAA
Upstream 100 bases:
>100_bases AGATAACCGGGGATATTTCCCCTTGCAGCTTGAACTCTGCACCATTGAATTCTTAGGATGTGTCCTCTTAGGCATATTGA CGCTCCATGGCAGGTGGATT
Downstream 100 bases:
>100_bases TTAAGGCCGATTGATTAAGCTGGCGGCGAGAATCAGCTCTGGGTTCCCGTACTTTGGGAATTTATTGATCTTTATCTCAT TTTTGTGAATAGGCTAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTAIQHIERLARSRSEQAVAVIRNVQQMSNIPMQEMQAALKQLLHCGRVALHFHPDRIDSRGITVAEGLLRDGQYRSQFE THISNGQLSPELGGPRDHWENQLFGDAYKGTKSRPKYGALDLGMWQDGPAPRFGSCYLLTHSQLLTRSTFTYLDSYRNPK EKGTLSCFDDVLAALLTESFERHYALGKVDFKPLNVIQYLAHQLNSSLLSRFERPMSTNLDHYIEAQIHGDVSLDEDIAM LVADPSFKGTEIGATLSKLCDRYDIELQYHNGFSLHTAQIPSDFRGPTMPSLASRIAIDERVDAYAIGVAARDLYHSPQH WRHRGNRAQVAHELKLLWHVLVKYGAQQ
Sequences:
>Translated_348_residues MTAIQHIERLARSRSEQAVAVIRNVQQMSNIPMQEMQAALKQLLHCGRVALHFHPDRIDSRGITVAEGLLRDGQYRSQFE THISNGQLSPELGGPRDHWENQLFGDAYKGTKSRPKYGALDLGMWQDGPAPRFGSCYLLTHSQLLTRSTFTYLDSYRNPK EKGTLSCFDDVLAALLTESFERHYALGKVDFKPLNVIQYLAHQLNSSLLSRFERPMSTNLDHYIEAQIHGDVSLDEDIAM LVADPSFKGTEIGATLSKLCDRYDIELQYHNGFSLHTAQIPSDFRGPTMPSLASRIAIDERVDAYAIGVAARDLYHSPQH WRHRGNRAQVAHELKLLWHVLVKYGAQQ >Mature_347_residues TAIQHIERLARSRSEQAVAVIRNVQQMSNIPMQEMQAALKQLLHCGRVALHFHPDRIDSRGITVAEGLLRDGQYRSQFET HISNGQLSPELGGPRDHWENQLFGDAYKGTKSRPKYGALDLGMWQDGPAPRFGSCYLLTHSQLLTRSTFTYLDSYRNPKE KGTLSCFDDVLAALLTESFERHYALGKVDFKPLNVIQYLAHQLNSSLLSRFERPMSTNLDHYIEAQIHGDVSLDEDIAML VADPSFKGTEIGATLSKLCDRYDIELQYHNGFSLHTAQIPSDFRGPTMPSLASRIAIDERVDAYAIGVAARDLYHSPQHW RHRGNRAQVAHELKLLWHVLVKYGAQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39422; Mature: 39291
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIQHIERLARSRSEQAVAVIRNVQQMSNIPMQEMQAALKQLLHCGRVALHFHPDRIDS CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCC RGITVAEGLLRDGQYRSQFETHISNGQLSPELGGPRDHWENQLFGDAYKGTKSRPKYGAL CCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCCCCCCCE DLGMWQDGPAPRFGSCYLLTHSQLLTRSTFTYLDSYRNPKEKGTLSCFDDVLAALLTESF ECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ERHYALGKVDFKPLNVIQYLAHQLNSSLLSRFERPMSTNLDHYIEAQIHGDVSLDEDIAM HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCEEEEEECCCCCCCCCEEE LVADPSFKGTEIGATLSKLCDRYDIELQYHNGFSLHTAQIPSDFRGPTMPSLASRIAIDE EEECCCCCCCHHHHHHHHHHCHHCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHH RVDAYAIGVAARDLYHSPQHWRHRGNRAQVAHELKLLWHVLVKYGAQQ CCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAIQHIERLARSRSEQAVAVIRNVQQMSNIPMQEMQAALKQLLHCGRVALHFHPDRIDS CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCC RGITVAEGLLRDGQYRSQFETHISNGQLSPELGGPRDHWENQLFGDAYKGTKSRPKYGAL CCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCCCCCCCE DLGMWQDGPAPRFGSCYLLTHSQLLTRSTFTYLDSYRNPKEKGTLSCFDDVLAALLTESF ECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ERHYALGKVDFKPLNVIQYLAHQLNSSLLSRFERPMSTNLDHYIEAQIHGDVSLDEDIAM HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCEEEEEECCCCCCCCCEEE LVADPSFKGTEIGATLSKLCDRYDIELQYHNGFSLHTAQIPSDFRGPTMPSLASRIAIDE EEECCCCCCCHHHHHHHHHHCHHCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHH RVDAYAIGVAARDLYHSPQHWRHRGNRAQVAHELKLLWHVLVKYGAQQ CCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA