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The map label for this gene is ubiX [C]

Identifier: 117919244

GI number: 117919244

Start: 913115

End: 913774

Strand: Direct

Name: ubiX [C]

Synonym: Shewana3_0792

Alternate gene names: 117919244

Gene position: 913115-913774 (Clockwise)

Preceding gene: 117919243

Following gene: 117919245

Centisome position: 18.36

GC content: 51.36

Gene sequence:

>660_bases
ATGGCCTACGCCAAATCTGAGAAAGCCATTAGCTTAGCCTGGACGGGGGCCTCGGGCGCGCCCTATGGCTTGAAATTATT
AGAATGTTTATTAGCCTCGGGCTATCAAGTATTTTTAATGATCTCGAGCGCCGCCCGTGTGGTGCTGGCCACTGAGCATG
GCTTGCAGCTCAGTGCGAACAGCGATAAAGCCAAGGCACAACTGCTCGAGGTGCTGGCACAGAAACAGATAACCTTATCT
GGCGAGTTAGTGGTATTAGGCAAAGATGAGTGGTTTTCGCCGCCAGCATCCGGCAGTGCTGCACCCAAACAAATGGTGAT
TTGCCCTTGTTCGACGGGGACACTGGCAGCTGTTGCCACTGGCATGAGCAATAATTTGCTCGAACGGGCGGCGGACGTGG
TATTAAAAGAGCGCGGTCAGCTGATCCTAGTTCCGCGTGAAACTCCATTTAATGCCATACACTTAGAGCATATGTTAACT
CTGTCGCGCTTAGGTGCCACTATTATGCCTGCGGCGCCGGGCTTTTATCATAATCCCAAATCCGTAGAAGATCTGGTAGA
CTTCATGGTCGCTCGAATCCTCGATCATTTGGGCGTTGACCATGCATTAACGAGTCGCTGGGGCTATGACAAACACTCCC
CCAATGACATCGACAATTGA

Upstream 100 bases:

>100_bases
CTATCGTGGTGATGAGTAACGGCGGCTTTGGTGGCTTACATAAGAAACTGTTGGCGGCGCTCGAAGTCAGCCCACAGTTT
GTTCAGCAGGCGGACTAAAT

Downstream 100 bases:

>100_bases
GACTGATATGAAACACACCACCGAAGTGATGATCTCCGCCGAAGAGATCAGCCAAAAATTGGATCAAATGGCCGAGCAAA
TCAATGCCCACTATGCCAAC

Product: aromatic acid decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MAYAKSEKAISLAWTGASGAPYGLKLLECLLASGYQVFLMISSAARVVLATEHGLQLSANSDKAKAQLLEVLAQKQITLS
GELVVLGKDEWFSPPASGSAAPKQMVICPCSTGTLAAVATGMSNNLLERAADVVLKERGQLILVPRETPFNAIHLEHMLT
LSRLGATIMPAAPGFYHNPKSVEDLVDFMVARILDHLGVDHALTSRWGYDKHSPNDIDN

Sequences:

>Translated_219_residues
MAYAKSEKAISLAWTGASGAPYGLKLLECLLASGYQVFLMISSAARVVLATEHGLQLSANSDKAKAQLLEVLAQKQITLS
GELVVLGKDEWFSPPASGSAAPKQMVICPCSTGTLAAVATGMSNNLLERAADVVLKERGQLILVPRETPFNAIHLEHMLT
LSRLGATIMPAAPGFYHNPKSVEDLVDFMVARILDHLGVDHALTSRWGYDKHSPNDIDN
>Mature_218_residues
AYAKSEKAISLAWTGASGAPYGLKLLECLLASGYQVFLMISSAARVVLATEHGLQLSANSDKAKAQLLEVLAQKQITLSG
ELVVLGKDEWFSPPASGSAAPKQMVICPCSTGTLAAVATGMSNNLLERAADVVLKERGQLILVPRETPFNAIHLEHMLTL
SRLGATIMPAAPGFYHNPKSVEDLVDFMVARILDHLGVDHALTSRWGYDKHSPNDIDN

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=203, Percent_Identity=36.4532019704434, Blast_Score=115, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6320746, Length=200, Percent_Identity=35.5, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 23479; Mature: 23348

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYAKSEKAISLAWTGASGAPYGLKLLECLLASGYQVFLMISSAARVVLATEHGLQLSAN
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCEEEECC
SDKAKAQLLEVLAQKQITLSGELVVLGKDEWFSPPASGSAAPKQMVICPCSTGTLAAVAT
CCHHHHHHHHHHHHHCEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH
GMSNNLLERAADVVLKERGQLILVPRETPFNAIHLEHMLTLSRLGATIMPAAPGFYHNPK
CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCC
SVEDLVDFMVARILDHLGVDHALTSRWGYDKHSPNDIDN
CHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AYAKSEKAISLAWTGASGAPYGLKLLECLLASGYQVFLMISSAARVVLATEHGLQLSAN
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCEEEECC
SDKAKAQLLEVLAQKQITLSGELVVLGKDEWFSPPASGSAAPKQMVICPCSTGTLAAVAT
CCHHHHHHHHHHHHHCEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH
GMSNNLLERAADVVLKERGQLILVPRETPFNAIHLEHMLTLSRLGATIMPAAPGFYHNPK
CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCC
SVEDLVDFMVARILDHLGVDHALTSRWGYDKHSPNDIDN
CHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]