Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919242

Identifier: 117919242

GI number: 117919242

Start: 910911

End: 911546

Strand: Direct

Name: 117919242

Synonym: Shewana3_0790

Alternate gene names: NA

Gene position: 910911-911546 (Clockwise)

Preceding gene: 117919241

Following gene: 117919243

Centisome position: 18.32

GC content: 50.79

Gene sequence:

>636_bases
ATGGTCGATGAGCCGCATTTAACCTTAGAGGAATTGGCTTGTTTTAGAGAGCTATTTTCTCCTAATCGCATAACCCATAA
CGCCGAGGATGCTTATCCTGAGCCCTTGGTTAACCATGTATTAACGGTCAAAACCGATGTGCCGCAGGCGCTGGCTTTGC
TATTGGGTAAGGCCAAGTTAACCCTGCTGGCCGAGGTCGGCCCCTATAAACTCTGGTTTCCCTTAGAGATGCGCCTCGAT
GATTTTGGTCAATTGCAGCCTACTCTTGGGGTGCCTGAAGTGTTTGACGCGACTGGCGCGGAGCGAAGTTGGCGTTTGAC
TCAGCCAGAAGATGTGTGGATCTTCGACCAAGATCGGGGTGAACAGTGGTCTGTGGTGTCTTTGTCGAGTTCTGGTATGG
CGATCCGTGCTAAATCACCACAACAGTTTGAGCGCTTAGTCGATAGTCAAGAACTGCAATTACAGTTGCCCGATGGTGAA
ACCATGCGGGTTAAAATCGAGCCTATTCGCCATGAAGAGGGACTGGCGATTGTCAGGTTTCAGGCCGAAGCCGAAGAGCG
AGAAGCCCTGCGTCAGTTCCTCTTTAATCGTCACCGCAGTCAATATCCAAAGCTCTATGCCAGCTTGCGCGGATAA

Upstream 100 bases:

>100_bases
CTACTTTTCTTTTTTTGCAAATTTACAGATGAAAAAATGTACAGCACCATGCTTTGGTGGTAATTTTTTGTACAAGGGAT
TCATCTGAGTAGGTTGCAGT

Downstream 100 bases:

>100_bases
GTGAGCTGAGTGGCACAATTCTGTTAGCTAAACTTCACTCAATTGTAAAAATCCCTTTCTCTATCAGTATCTTTGCCAAA
CAAGTGGCTTTTCCGAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MVDEPHLTLEELACFRELFSPNRITHNAEDAYPEPLVNHVLTVKTDVPQALALLLGKAKLTLLAEVGPYKLWFPLEMRLD
DFGQLQPTLGVPEVFDATGAERSWRLTQPEDVWIFDQDRGEQWSVVSLSSSGMAIRAKSPQQFERLVDSQELQLQLPDGE
TMRVKIEPIRHEEGLAIVRFQAEAEEREALRQFLFNRHRSQYPKLYASLRG

Sequences:

>Translated_211_residues
MVDEPHLTLEELACFRELFSPNRITHNAEDAYPEPLVNHVLTVKTDVPQALALLLGKAKLTLLAEVGPYKLWFPLEMRLD
DFGQLQPTLGVPEVFDATGAERSWRLTQPEDVWIFDQDRGEQWSVVSLSSSGMAIRAKSPQQFERLVDSQELQLQLPDGE
TMRVKIEPIRHEEGLAIVRFQAEAEEREALRQFLFNRHRSQYPKLYASLRG
>Mature_211_residues
MVDEPHLTLEELACFRELFSPNRITHNAEDAYPEPLVNHVLTVKTDVPQALALLLGKAKLTLLAEVGPYKLWFPLEMRLD
DFGQLQPTLGVPEVFDATGAERSWRLTQPEDVWIFDQDRGEQWSVVSLSSSGMAIRAKSPQQFERLVDSQELQLQLPDGE
TMRVKIEPIRHEEGLAIVRFQAEAEEREALRQFLFNRHRSQYPKLYASLRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24238; Mature: 24238

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDEPHLTLEELACFRELFSPNRITHNAEDAYPEPLVNHVLTVKTDVPQALALLLGKAKL
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEEEECCHHHHHHHHHCCHHE
TLLAEVGPYKLWFPLEMRLDDFGQLQPTLGVPEVFDATGAERSWRLTQPEDVWIFDQDRG
EEEEECCCEEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCCEEEEEECCCC
EQWSVVSLSSSGMAIRAKSPQQFERLVDSQELQLQLPDGETMRVKIEPIRHEEGLAIVRF
CEEEEEEECCCCEEEEECCHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEEE
QAEAEEREALRQFLFNRHRSQYPKLYASLRG
ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVDEPHLTLEELACFRELFSPNRITHNAEDAYPEPLVNHVLTVKTDVPQALALLLGKAKL
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEEEECCHHHHHHHHHCCHHE
TLLAEVGPYKLWFPLEMRLDDFGQLQPTLGVPEVFDATGAERSWRLTQPEDVWIFDQDRG
EEEEECCCEEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCCEEEEEECCCC
EQWSVVSLSSSGMAIRAKSPQQFERLVDSQELQLQLPDGETMRVKIEPIRHEEGLAIVRF
CEEEEEEECCCCEEEEECCHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEEE
QAEAEEREALRQFLFNRHRSQYPKLYASLRG
ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA