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The map label for this gene is 117919183

Identifier: 117919183

GI number: 117919183

Start: 847589

End: 848764

Strand: Direct

Name: 117919183

Synonym: Shewana3_0731

Alternate gene names: NA

Gene position: 847589-848764 (Clockwise)

Preceding gene: 117919182

Following gene: 117919184

Centisome position: 17.05

GC content: 48.72

Gene sequence:

>1176_bases
ATGTTGTATATAAAAACTAATAATTATAAATATTTAAGGGTGTTCTCTGCCTTCGGGGCCCTACTGGCGAGTCTGGCGTT
ATTAACGAGCCAGGCGGCGATAGCGGGGTCTCAGTCGATCATGATTACCGTGTCGAAGGGATTTGGTTTATCCCTTTATG
CCTCCGATCTCGGGGATGCAAAGCAGATAGCCATGGGCTCAAACGGCACACTCTTTGTGGGTTCCAATAAGAGTGGTATT
GTGCATGCGCTCGTTGACAGCAATCAAGATGGCCGCGTCGATAAACGTTATGTGATTGCCAAAGGGCTGGAATCCCCCGA
TGCGATAGCCTTCCATAATGGCGATCTTTTTGTCGCGACTGAAAACCGTATCGTACGTTTTATTGATATTGAGCAGCGCC
TACGCCGTCCGACTCGCCCGAAAGAGATCTACAGCGATCTGCCAGAATCTGATAAAAAAAGTGCCCGAGCGATGAATTTT
GGCCCCGATGGCCGCTTGTATGTCTCCATCGGTGCACCGTGCAACGTGTGTGAGGCGAGTGCGCCCTACAGCAGCATAAT
TGCGATTAATGTCGATACTGGAGCAAGTGAGCAGATTGCCCTAGGCGTACGTGATGCGACTGGATTTGACTGGTCTCCCC
AAGATGGCAAGTTATGGTTTGCCGACCAAGGTCGTGATTGGATGGGGGATAATTTACCGCCCGATGAAATCAACCGCGTC
GATGTGATTGGCAGCCATTATGGTTTCCCGTATTTGCACGCTTCGTCCGTGGTCGAGCCTGCCTACGAAAAACCTAAGAA
TTTAAAAATTACCGTCCCGGTTTATGAACTGCCAGCCCATGTTGCACCGACTGGCCTCGCGTTTTACCGCGGTAAGCAAT
TCCCTGAGATCTACCATAATCAATTGTTTGTTGCTGAAAATGGTTCTTGGAACCGTTCAAGCAAAGTGGGTTATCAGATC
GTCATGTTGAAACTCGAGAATGAGCAAGTTGTCAGCCGTGAAACCGTAGTGAGTTTTCTTGATGGCGAGTTTCCCGTTGC
CCGTCCCTATGCCCTGTTATCGGGGGAAGATGGCGCAATGTACATCTCGGATGATTTGAAAGGTAACCTGTATCGGCTGT
TCTATAAGGATGGCGATAATACTGAAGAACCACAGGAACTAGAAGAAAATGAGTGA

Upstream 100 bases:

>100_bases
GATCGTAAAAACTGGCTCGAGGATAAGGGTGACATGGCGGTACTTTAATGTTGTGCACTATTGCCGATAACAATAAAACT
TAGGCATAAAGAAAATTACC

Downstream 100 bases:

>100_bases
CGCGATCAAGTTAAGCTTAGATGGCGTAGAGCAGATGCCCCTGCGGCGCTTTACCGAAGAAGCTTATCTGAACTATTCCA
TGTACGTCATCATGGACCGA

Product: L-sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MLYIKTNNYKYLRVFSAFGALLASLALLTSQAAIAGSQSIMITVSKGFGLSLYASDLGDAKQIAMGSNGTLFVGSNKSGI
VHALVDSNQDGRVDKRYVIAKGLESPDAIAFHNGDLFVATENRIVRFIDIEQRLRRPTRPKEIYSDLPESDKKSARAMNF
GPDGRLYVSIGAPCNVCEASAPYSSIIAINVDTGASEQIALGVRDATGFDWSPQDGKLWFADQGRDWMGDNLPPDEINRV
DVIGSHYGFPYLHASSVVEPAYEKPKNLKITVPVYELPAHVAPTGLAFYRGKQFPEIYHNQLFVAENGSWNRSSKVGYQI
VMLKLENEQVVSRETVVSFLDGEFPVARPYALLSGEDGAMYISDDLKGNLYRLFYKDGDNTEEPQELEENE

Sequences:

>Translated_391_residues
MLYIKTNNYKYLRVFSAFGALLASLALLTSQAAIAGSQSIMITVSKGFGLSLYASDLGDAKQIAMGSNGTLFVGSNKSGI
VHALVDSNQDGRVDKRYVIAKGLESPDAIAFHNGDLFVATENRIVRFIDIEQRLRRPTRPKEIYSDLPESDKKSARAMNF
GPDGRLYVSIGAPCNVCEASAPYSSIIAINVDTGASEQIALGVRDATGFDWSPQDGKLWFADQGRDWMGDNLPPDEINRV
DVIGSHYGFPYLHASSVVEPAYEKPKNLKITVPVYELPAHVAPTGLAFYRGKQFPEIYHNQLFVAENGSWNRSSKVGYQI
VMLKLENEQVVSRETVVSFLDGEFPVARPYALLSGEDGAMYISDDLKGNLYRLFYKDGDNTEEPQELEENE
>Mature_391_residues
MLYIKTNNYKYLRVFSAFGALLASLALLTSQAAIAGSQSIMITVSKGFGLSLYASDLGDAKQIAMGSNGTLFVGSNKSGI
VHALVDSNQDGRVDKRYVIAKGLESPDAIAFHNGDLFVATENRIVRFIDIEQRLRRPTRPKEIYSDLPESDKKSARAMNF
GPDGRLYVSIGAPCNVCEASAPYSSIIAINVDTGASEQIALGVRDATGFDWSPQDGKLWFADQGRDWMGDNLPPDEINRV
DVIGSHYGFPYLHASSVVEPAYEKPKNLKITVPVYELPAHVAPTGLAFYRGKQFPEIYHNQLFVAENGSWNRSSKVGYQI
VMLKLENEQVVSRETVVSFLDGEFPVARPYALLSGEDGAMYISDDLKGNLYRLFYKDGDNTEEPQELEENE

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 43165; Mature: 43165

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYIKTNNYKYLRVFSAFGALLASLALLTSQAAIAGSQSIMITVSKGFGLSLYASDLGDA
CEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCC
KQIAMGSNGTLFVGSNKSGIVHALVDSNQDGRVDKRYVIAKGLESPDAIAFHNGDLFVAT
EEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEECCCEEEEE
ENRIVRFIDIEQRLRRPTRPKEIYSDLPESDKKSARAMNFGPDGRLYVSIGAPCNVCEAS
CCCEEEEEEHHHHHCCCCCHHHHHHCCCCCHHHHCCEECCCCCCEEEEEECCCCCCCCCC
APYSSIIAINVDTGASEQIALGVRDATGFDWSPQDGKLWFADQGRDWMGDNLPPDEINRV
CCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCEE
DVIGSHYGFPYLHASSVVEPAYEKPKNLKITVPVYELPAHVAPTGLAFYRGKQFPEIYHN
EEEECCCCCCEEEHHHHHCHHHCCCCCCEEEEEHEECCCCCCCCCCHHHCCCCCCHHHCC
QLFVAENGSWNRSSKVGYQIVMLKLENEQVVSRETVVSFLDGEFPVARPYALLSGEDGAM
EEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEE
YISDDLKGNLYRLFYKDGDNTEEPQELEENE
EEECCCCCCEEEEEEECCCCCCCCHHHCCCC
>Mature Secondary Structure
MLYIKTNNYKYLRVFSAFGALLASLALLTSQAAIAGSQSIMITVSKGFGLSLYASDLGDA
CEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCC
KQIAMGSNGTLFVGSNKSGIVHALVDSNQDGRVDKRYVIAKGLESPDAIAFHNGDLFVAT
EEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEECCCEEEEE
ENRIVRFIDIEQRLRRPTRPKEIYSDLPESDKKSARAMNFGPDGRLYVSIGAPCNVCEAS
CCCEEEEEEHHHHHCCCCCHHHHHHCCCCCHHHHCCEECCCCCCEEEEEECCCCCCCCCC
APYSSIIAINVDTGASEQIALGVRDATGFDWSPQDGKLWFADQGRDWMGDNLPPDEINRV
CCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCEE
DVIGSHYGFPYLHASSVVEPAYEKPKNLKITVPVYELPAHVAPTGLAFYRGKQFPEIYHN
EEEECCCCCCEEEHHHHHCHHHCCCCCCEEEEEHEECCCCCCCCCCHHHCCCCCCHHHCC
QLFVAENGSWNRSSKVGYQIVMLKLENEQVVSRETVVSFLDGEFPVARPYALLSGEDGAM
EEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEE
YISDDLKGNLYRLFYKDGDNTEEPQELEENE
EEECCCCCCEEEEEEECCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]